Wall clock time and date at job start Mon Mar 30 2020 06:54:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35676 * 116.99635 * 2 1 4 4 C 1.38990 * 119.88774 * 0.02562 * 3 2 1 5 5 C 1.37918 * 120.08179 * 179.97438 * 4 3 2 6 6 F 1.35096 * 120.07487 * 180.02562 * 5 4 3 7 7 C 1.40288 * 119.85406 * 0.02562 * 5 4 3 8 8 C 1.47426 * 120.11436 * 179.97438 * 7 5 4 9 9 O 1.21848 * 119.99850 * 359.97438 * 8 7 5 10 10 C 1.41761 * 120.00272 * 180.02562 * 8 7 5 11 11 H 1.07997 * 120.00330 * 359.97438 * 10 8 7 12 12 C 1.40331 * 120.00066 * 180.02562 * 10 8 7 13 13 N 1.30539 * 120.00134 * 359.97438 * 12 10 8 14 14 Si 1.86800 * 120.00108 * 179.97438 * 12 10 8 15 15 H 1.48503 * 109.46790 * 59.99959 * 14 12 10 16 16 H 1.48499 * 109.47403 * 179.97438 * 14 12 10 17 17 H 1.48493 * 109.47237 * 300.00221 * 14 12 10 18 18 C 1.39973 * 119.77594 * 359.97438 * 7 5 4 19 19 C 1.37626 * 119.91629 * 359.72808 * 18 7 5 20 20 Cl 1.73596 * 119.92878 * 180.27471 * 19 18 7 21 21 H 1.09002 * 109.47382 * 59.99725 * 1 2 3 22 22 H 1.09001 * 109.46938 * 299.99712 * 1 2 3 23 23 H 1.09004 * 109.46926 * 179.97438 * 1 2 3 24 24 H 1.07999 * 119.95853 * 359.97274 * 4 3 2 25 25 H 0.97003 * 120.00174 * 180.02562 * 13 12 10 26 26 H 1.08000 * 120.04478 * 179.97438 * 18 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2089 0.0000 4 6 1.2856 2.3731 0.0005 5 6 1.9075 3.6041 0.0011 6 9 1.1692 4.7355 0.0021 7 6 3.3083 3.6788 0.0005 8 6 3.9791 4.9916 0.0005 9 8 3.3165 6.0142 0.0005 10 6 5.3948 5.0643 -0.0006 11 1 5.9821 4.1580 -0.0010 12 6 6.0332 6.3140 0.0000 13 7 5.3234 7.4096 0.0010 14 14 7.8988 6.4098 -0.0008 15 1 8.4284 5.7368 -1.2140 16 1 8.3214 7.8334 -0.0006 17 1 8.4295 5.7353 1.2110 18 6 4.0672 2.5026 0.0000 19 6 3.4369 1.2791 0.0057 20 17 4.3777 -0.1798 0.0122 21 1 -0.3634 0.5139 -0.8900 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 0.2072 2.3136 0.0005 25 1 5.7647 8.2734 0.0010 26 1 5.1459 2.5550 -0.0008 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000382691944.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:54:22 Heat of formation + Delta-G solvation = -106.172436 kcal Electronic energy + Delta-G solvation = -16572.317369 eV Core-core repulsion = 13363.955282 eV Total energy + Delta-G solvation = -3208.362086 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 258.025 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -48.16752 -39.87670 -37.58694 -36.35473 -35.57531 -32.75401 -30.54493 -29.84830 -27.39466 -26.67524 -22.93451 -22.23382 -19.99349 -18.25021 -17.10707 -16.45352 -15.85655 -15.75444 -15.48865 -14.81831 -14.53902 -14.30122 -13.88906 -13.30018 -12.88258 -12.59643 -12.45272 -12.03884 -11.63580 -11.49574 -11.37740 -11.08961 -11.08784 -10.62803 -10.43232 -10.34229 -10.27706 -9.03626 -8.51468 -7.70080 -7.58315 -6.39081 -4.99916 1.35962 1.43837 2.45236 3.03372 3.09835 3.11657 3.22561 3.59981 3.95310 4.42948 4.66241 4.89832 5.02639 5.09978 5.29949 5.39223 5.60298 5.65030 5.76264 6.00561 6.29707 6.49949 6.72100 7.00474 7.14938 7.38392 7.91458 8.68112 8.70264 10.21138 10.42344 Molecular weight = 258.02amu Principal moments of inertia in cm(-1) A = 0.025099 B = 0.006940 C = 0.005453 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1115.318288 B = 4033.458265 C = 5133.625090 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.304 6.304 3 C 0.152 3.848 4 C -0.252 4.252 5 C 0.168 3.832 6 F -0.113 7.113 7 C -0.160 4.160 8 C 0.386 3.614 9 O -0.528 6.528 10 C -0.512 4.512 11 H 0.076 0.924 12 C 0.079 3.921 13 N -0.731 5.731 14 Si 0.909 3.091 15 H -0.263 1.263 16 H -0.277 1.277 17 H -0.263 1.263 18 C -0.021 4.021 19 C -0.090 4.090 20 Cl -0.068 7.068 21 H 0.057 0.943 22 H 0.057 0.943 23 H 0.100 0.900 24 H 0.142 0.858 25 H 0.277 0.723 26 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.281 -12.248 0.002 12.974 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.217 6.217 3 C 0.105 3.895 4 C -0.272 4.272 5 C 0.148 3.852 6 F -0.091 7.091 7 C -0.162 4.162 8 C 0.282 3.718 9 O -0.417 6.417 10 C -0.543 4.543 11 H 0.094 0.906 12 C -0.145 4.145 13 N -0.359 5.359 14 Si 0.732 3.268 15 H -0.188 1.188 16 H -0.202 1.202 17 H -0.188 1.188 18 C -0.040 4.040 19 C -0.117 4.117 20 Cl -0.039 7.039 21 H 0.075 0.925 22 H 0.075 0.925 23 H 0.118 0.882 24 H 0.159 0.841 25 H 0.088 0.912 26 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -4.538 -11.854 0.004 12.693 hybrid contribution 0.542 0.060 -0.002 0.545 sum -3.996 -11.794 0.002 12.453 Atomic orbital electron populations 1.23093 0.78394 1.03860 1.01634 1.86081 1.21311 1.25880 1.88385 1.18397 0.90107 0.84215 0.96743 1.20941 1.00591 0.90722 1.14917 1.17737 0.89054 0.81484 0.96953 1.91561 1.76017 1.48976 1.92588 1.22116 0.91389 0.99796 1.02949 1.17894 0.89513 0.84154 0.80277 1.90592 1.67359 1.35008 1.48750 1.20844 0.92924 0.93341 1.47195 0.90639 1.25994 1.00506 0.95249 0.92755 1.69949 1.37458 0.98586 1.29939 0.86388 0.82209 0.78181 0.80008 1.18755 1.20205 1.18751 1.21235 1.01418 0.87886 0.93491 1.20125 0.88252 0.88587 1.14760 1.98324 1.72135 1.36064 1.97390 0.92484 0.92478 0.88177 0.84053 0.91235 0.82592 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.24 9.80 101.05 0.99 1.24 15 2 O -0.30 -4.32 9.94 -18.73 -0.19 -4.51 15 3 C 0.15 2.52 6.70 -38.88 -0.26 2.26 15 4 C -0.25 -4.29 8.99 -39.42 -0.35 -4.64 15 5 C 0.17 3.58 7.28 -38.93 -0.28 3.30 15 6 F -0.11 -2.65 15.54 2.25 0.04 -2.62 15 7 C -0.16 -3.69 5.89 -104.74 -0.62 -4.30 15 8 C 0.39 10.78 6.90 -34.50 -0.24 10.55 15 9 O -0.53 -16.73 13.88 5.06 0.07 -16.66 15 10 C -0.51 -13.65 8.85 -37.45 -0.33 -13.98 15 11 H 0.08 1.78 6.01 -52.49 -0.32 1.47 15 12 C 0.08 2.07 5.50 -17.31 -0.10 1.98 15 13 N -0.73 -20.69 11.73 55.57 0.65 -20.04 15 14 Si 0.91 18.78 29.56 -169.99 -5.03 13.75 15 15 H -0.26 -5.29 7.11 56.52 0.40 -4.89 15 16 H -0.28 -5.60 7.11 56.52 0.40 -5.19 15 17 H -0.26 -5.29 7.11 56.52 0.40 -4.88 15 18 C -0.02 -0.42 9.20 -39.15 -0.36 -0.78 15 19 C -0.09 -1.58 6.33 -39.38 -0.25 -1.83 15 20 Cl -0.07 -1.05 28.49 -51.86 -1.48 -2.52 15 21 H 0.06 0.51 7.65 -51.93 -0.40 0.11 15 22 H 0.06 0.51 7.65 -51.93 -0.40 0.11 15 23 H 0.10 0.70 8.14 -51.93 -0.42 0.28 15 24 H 0.14 1.95 6.27 -52.49 -0.33 1.62 15 25 H 0.28 7.02 8.29 -40.82 -0.34 6.68 15 26 H 0.16 2.90 6.19 -52.49 -0.33 2.58 15 LS Contribution 256.12 15.07 3.86 3.86 Total: -1.00 -31.88 256.12 -5.19 -37.07 By element: Atomic # 1 Polarization: -0.79 SS G_CDS: -1.32 Total: -2.11 kcal Atomic # 6 Polarization: -4.42 SS G_CDS: -1.80 Total: -6.21 kcal Atomic # 7 Polarization: -20.69 SS G_CDS: 0.65 Total: -20.04 kcal Atomic # 8 Polarization: -21.06 SS G_CDS: -0.12 Total: -21.17 kcal Atomic # 9 Polarization: -2.65 SS G_CDS: 0.04 Total: -2.62 kcal Atomic # 14 Polarization: 18.78 SS G_CDS: -5.03 Total: 13.75 kcal Atomic # 17 Polarization: -1.05 SS G_CDS: -1.48 Total: -2.52 kcal Total LS contribution 3.86 Total: 3.86 kcal Total: -31.88 -5.19 -37.07 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000382691944.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.105 kcal (2) G-P(sol) polarization free energy of solvation -31.876 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.981 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.067 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.172 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds