Wall clock time and date at job start Mon Mar 30 2020 06:54:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35698 * 116.99730 * 2 1 4 4 C 1.39033 * 119.90281 * 359.97438 * 3 2 1 5 5 C 1.37779 * 120.10465 * 180.02562 * 4 3 2 6 6 Cl 1.73604 * 120.04523 * 179.97438 * 5 4 3 7 7 C 1.40135 * 119.90987 * 359.97438 * 5 4 3 8 8 C 1.47491 * 120.09724 * 179.97438 * 7 5 4 9 9 O 1.21835 * 120.00316 * 0.02562 * 8 7 5 10 10 C 1.41737 * 119.99998 * 180.02562 * 8 7 5 11 11 H 1.08002 * 120.00065 * 0.02562 * 10 8 7 12 12 C 1.40341 * 120.00112 * 180.02562 * 10 8 7 13 13 N 1.30540 * 119.99886 * 0.02562 * 12 10 8 14 14 Si 1.86803 * 120.00498 * 180.02562 * 12 10 8 15 15 H 1.48498 * 109.46889 * 59.99717 * 14 12 10 16 16 H 1.48496 * 109.47615 * 179.97438 * 14 12 10 17 17 H 1.48508 * 109.46816 * 300.00275 * 14 12 10 18 18 C 1.39959 * 119.80730 * 0.02562 * 7 5 4 19 19 C 1.37727 * 119.89164 * 359.74248 * 18 7 5 20 20 F 1.35105 * 119.95404 * 180.27370 * 19 18 7 21 21 H 1.09002 * 109.47382 * 59.99993 * 1 2 3 22 22 H 1.09001 * 109.46938 * 299.99979 * 1 2 3 23 23 H 1.09004 * 109.46926 * 180.02562 * 1 2 3 24 24 H 1.07997 * 119.95136 * 359.97438 * 4 3 2 25 25 H 0.97003 * 119.99734 * 179.97438 * 13 12 10 26 26 H 1.08002 * 120.05001 * 179.97438 * 18 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2091 0.0000 4 6 1.2858 2.3738 -0.0005 5 6 1.9069 3.6037 -0.0011 6 17 0.9573 5.0570 -0.0024 7 6 3.3062 3.6798 -0.0005 8 6 3.9754 4.9941 -0.0017 9 8 3.3116 6.0158 -0.0026 10 6 5.3908 5.0688 -0.0017 11 1 5.9793 4.1632 -0.0013 12 6 6.0276 6.3194 -0.0022 13 7 5.3163 7.4140 -0.0022 14 14 7.8930 6.4178 -0.0029 15 1 8.4237 5.7445 -1.2154 16 1 8.3136 7.8420 -0.0041 17 1 8.4246 5.7450 1.2096 18 6 4.0668 2.5050 0.0000 19 6 3.4376 1.2799 0.0054 20 9 4.1706 0.1450 0.0115 21 1 -0.3634 0.5138 -0.8900 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 0.2074 2.3145 -0.0014 25 1 5.7564 8.2784 -0.0022 26 1 5.1455 2.5591 0.0000 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000705929830.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:54:28 Heat of formation + Delta-G solvation = -97.791403 kcal Electronic energy + Delta-G solvation = -16579.462112 eV Core-core repulsion = 13371.463455 eV Total energy + Delta-G solvation = -3207.998657 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 258.025 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -48.43255 -39.75536 -37.78932 -35.90339 -35.44504 -32.72922 -30.52442 -29.75605 -27.37962 -26.67367 -22.93321 -22.24819 -19.97099 -18.15318 -17.26872 -16.31346 -15.99114 -15.97205 -15.39973 -14.83283 -14.71830 -14.10810 -13.93636 -13.07477 -12.95297 -12.83419 -12.34777 -11.81761 -11.66461 -11.41788 -11.40762 -11.07637 -10.95840 -10.45450 -10.33961 -10.14781 -10.14652 -9.01509 -8.45391 -7.66541 -7.41069 -6.33896 -4.96663 1.36750 1.44261 2.79953 3.04028 3.10572 3.12247 3.25322 3.62088 3.96542 4.45593 4.50032 4.96608 5.09302 5.11140 5.38151 5.40563 5.50422 5.68472 5.84519 6.05522 6.14307 6.60721 6.72064 6.93668 7.16775 7.42085 7.93747 8.70668 8.72764 10.23737 10.44863 Molecular weight = 258.02amu Principal moments of inertia in cm(-1) A = 0.024989 B = 0.007238 C = 0.005630 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1120.240856 B = 3867.449559 C = 4972.541577 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.310 6.310 3 C 0.091 3.909 4 C -0.190 4.190 5 C 0.012 3.988 6 Cl -0.033 7.033 7 C -0.102 4.102 8 C 0.383 3.617 9 O -0.513 6.513 10 C -0.513 4.513 11 H 0.073 0.927 12 C 0.080 3.920 13 N -0.730 5.730 14 Si 0.906 3.094 15 H -0.264 1.264 16 H -0.278 1.278 17 H -0.264 1.264 18 C -0.081 4.081 19 C 0.057 3.943 20 F -0.137 7.137 21 H 0.056 0.944 22 H 0.056 0.944 23 H 0.099 0.901 24 H 0.140 0.860 25 H 0.276 0.724 26 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.783 -9.782 0.004 11.364 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.224 6.224 3 C 0.045 3.955 4 C -0.209 4.209 5 C -0.016 4.016 6 Cl -0.004 7.004 7 C -0.104 4.104 8 C 0.277 3.723 9 O -0.401 6.401 10 C -0.544 4.544 11 H 0.091 0.909 12 C -0.143 4.143 13 N -0.359 5.359 14 Si 0.730 3.270 15 H -0.189 1.189 16 H -0.202 1.202 17 H -0.188 1.188 18 C -0.101 4.101 19 C 0.037 3.963 20 F -0.116 7.116 21 H 0.075 0.925 22 H 0.075 0.925 23 H 0.118 0.882 24 H 0.157 0.843 25 H 0.087 0.913 26 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -6.156 -9.205 0.004 11.074 hybrid contribution 0.701 -0.153 0.000 0.717 sum -5.455 -9.358 0.003 10.832 Atomic orbital electron populations 1.23078 0.78393 1.03803 1.01602 1.86045 1.21380 1.25870 1.89062 1.18879 0.90539 0.84818 1.01281 1.20835 1.00099 0.90049 1.09964 1.20942 0.92129 0.87742 1.00758 1.98378 1.70330 1.35540 1.96102 1.21743 0.91270 0.99343 0.98039 1.17911 0.89395 0.84368 0.80605 1.90619 1.66845 1.34828 1.47791 1.20856 0.93115 0.93232 1.47231 0.90864 1.25955 1.00298 0.95289 0.92806 1.69941 1.37303 0.98517 1.30093 0.86423 0.82484 0.78127 0.79940 1.18851 1.20243 1.18845 1.21412 1.01868 0.88559 0.98212 1.17020 0.85710 0.82981 1.10544 1.91460 1.76695 1.48877 1.94554 0.92499 0.92507 0.88244 0.84268 0.91320 0.82478 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.27 9.81 101.05 0.99 1.26 15 2 O -0.31 -4.68 10.35 -18.80 -0.19 -4.88 15 3 C 0.09 1.56 6.71 -38.84 -0.26 1.30 15 4 C -0.19 -3.22 8.79 -39.45 -0.35 -3.56 15 5 C 0.01 0.25 6.35 -39.04 -0.25 0.00 15 6 Cl -0.03 -0.69 26.01 -51.86 -1.35 -2.04 15 7 C -0.10 -2.30 5.89 -104.77 -0.62 -2.92 15 8 C 0.38 10.34 6.90 -34.48 -0.24 10.10 15 9 O -0.51 -15.24 12.50 5.07 0.06 -15.17 15 10 C -0.51 -13.50 8.85 -37.46 -0.33 -13.83 15 11 H 0.07 1.73 6.01 -52.49 -0.32 1.42 15 12 C 0.08 2.08 5.50 -17.31 -0.10 1.99 15 13 N -0.73 -20.25 11.73 55.57 0.65 -19.59 15 14 Si 0.91 18.72 29.56 -169.99 -5.03 13.69 15 15 H -0.26 -5.33 7.11 56.52 0.40 -4.93 15 16 H -0.28 -5.60 7.11 56.52 0.40 -5.20 15 17 H -0.26 -5.33 7.11 56.52 0.40 -4.93 15 18 C -0.08 -1.62 9.40 -39.12 -0.37 -1.99 15 19 C 0.06 1.06 7.30 -39.32 -0.29 0.77 15 20 F -0.14 -2.48 17.11 2.25 0.04 -2.44 15 21 H 0.06 0.52 7.65 -51.93 -0.40 0.13 15 22 H 0.06 0.52 7.65 -51.93 -0.40 0.13 15 23 H 0.10 0.74 8.14 -51.93 -0.42 0.31 15 24 H 0.14 1.92 6.27 -52.49 -0.33 1.59 15 25 H 0.28 6.90 8.29 -40.82 -0.34 6.56 15 26 H 0.16 2.96 6.19 -52.49 -0.33 2.64 15 LS Contribution 254.30 15.07 3.83 3.83 Total: -1.00 -30.66 254.30 -5.10 -35.77 By element: Atomic # 1 Polarization: -0.97 SS G_CDS: -1.32 Total: -2.29 kcal Atomic # 6 Polarization: -5.08 SS G_CDS: -1.80 Total: -6.88 kcal Atomic # 7 Polarization: -20.25 SS G_CDS: 0.65 Total: -19.59 kcal Atomic # 8 Polarization: -19.92 SS G_CDS: -0.13 Total: -20.05 kcal Atomic # 9 Polarization: -2.48 SS G_CDS: 0.04 Total: -2.44 kcal Atomic # 14 Polarization: 18.72 SS G_CDS: -5.03 Total: 13.69 kcal Atomic # 17 Polarization: -0.69 SS G_CDS: -1.35 Total: -2.04 kcal Total LS contribution 3.83 Total: 3.83 kcal Total: -30.66 -5.10 -35.77 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000705929830.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.026 kcal (2) G-P(sol) polarization free energy of solvation -30.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.687 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.105 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.765 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.791 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds