Wall clock time and date at job start Mon Mar 30 2020 06:49:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37795 * 119.91723 * 2 1 4 4 C 1.39752 * 119.88269 * 179.72368 * 3 2 1 5 5 C 1.47466 * 120.13498 * 180.02562 * 4 3 2 6 6 O 1.21528 * 119.99671 * 179.97438 * 5 4 3 7 7 O 1.34759 * 119.99960 * 359.97438 * 5 4 3 8 8 C 1.34866 * 116.99839 * 180.02562 * 7 5 4 9 9 H 1.07997 * 119.99752 * 0.02562 * 8 7 5 10 10 C 1.38796 * 119.99975 * 179.97438 * 8 7 5 11 11 N 1.31424 * 120.00100 * 0.02562 * 10 8 7 12 12 Si 1.86796 * 119.99982 * 180.02562 * 10 8 7 13 13 H 1.48499 * 109.47278 * 60.00423 * 12 10 8 14 14 H 1.48506 * 109.47204 * 179.97438 * 12 10 8 15 15 H 1.48497 * 109.47247 * 300.00385 * 12 10 8 16 16 C 1.39891 * 119.72481 * 359.97438 * 4 3 2 17 17 Cl 1.73602 * 120.08410 * 180.02562 * 16 4 3 18 18 C 1.37969 * 119.83689 * 0.02562 * 16 4 3 19 19 C 1.38627 * 120.11111 * 0.02562 * 18 16 4 20 20 F 1.35096 * 119.85933 * 180.02562 * 19 18 16 21 21 H 1.08997 * 109.46638 * 90.00247 * 1 2 3 22 22 H 1.08997 * 109.47019 * 210.00312 * 1 2 3 23 23 H 1.08994 * 109.47183 * 330.00162 * 1 2 3 24 24 H 1.08000 * 120.05685 * 359.73944 * 3 2 1 25 25 H 0.97006 * 120.00212 * 180.02562 * 11 10 8 26 26 H 1.08003 * 119.94583 * 180.02562 * 18 16 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1943 1.1943 0.0000 4 6 3.5918 1.1935 0.0058 5 6 4.3329 2.4684 0.0064 6 8 5.5482 2.4647 0.0120 7 8 3.6626 3.6374 0.0008 8 6 4.4005 4.7663 0.0012 9 1 5.4788 4.7065 0.0054 10 6 3.7741 6.0049 -0.0049 11 7 2.4618 6.0776 -0.0106 12 14 4.7961 7.5684 -0.0051 13 1 5.6578 7.5964 -1.2142 14 1 3.8950 8.7488 -0.0129 15 1 5.6479 7.6032 1.2107 16 6 4.2847 -0.0217 0.0122 17 17 6.0207 -0.0337 0.0202 18 6 3.5850 -1.2109 0.0121 19 6 2.1988 -1.2021 0.0052 20 9 1.5188 -2.3695 0.0057 21 1 -0.3632 0.0000 -1.0277 22 1 -0.3633 -0.8899 0.5139 23 1 -0.3633 0.8899 0.5138 24 1 1.6539 2.1294 -0.0043 25 1 2.0240 6.9432 -0.0153 26 1 4.1182 -2.1501 0.0175 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000759989581.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:49:40 Heat of formation + Delta-G solvation = -104.492004 kcal Electronic energy + Delta-G solvation = -16428.333985 eV Core-core repulsion = 13220.044768 eV Total energy + Delta-G solvation = -3208.289217 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 258.025 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -48.96989 -39.61501 -38.22679 -36.18672 -35.14129 -32.54728 -32.28414 -30.83402 -26.79452 -25.67605 -23.55353 -22.27007 -19.99535 -17.83313 -17.69088 -17.10718 -16.40487 -15.76652 -15.05835 -14.61062 -14.45091 -14.36024 -13.82341 -13.42738 -13.32075 -13.02411 -12.63455 -12.50545 -11.90446 -11.64675 -11.25417 -11.19994 -10.83255 -10.74716 -10.50016 -10.46664 -9.92370 -8.85368 -8.82194 -8.66820 -8.41310 -6.53510 -4.14268 0.78327 1.15269 2.34062 3.01936 3.14247 3.18014 3.21583 3.81858 4.07363 4.21893 4.39133 4.69296 4.77552 5.07643 5.17226 5.37731 5.58138 5.61661 5.73328 5.92238 6.00819 6.19778 6.32563 6.72422 6.83020 7.30022 7.84782 8.63403 8.95320 9.74232 10.63885 Molecular weight = 258.02amu Principal moments of inertia in cm(-1) A = 0.025453 B = 0.006454 C = 0.005163 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1099.821943 B = 4337.101424 C = 5421.778447 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.127 4.127 3 C -0.036 4.036 4 C -0.085 4.085 5 C 0.425 3.575 6 O -0.529 6.529 7 O -0.204 6.204 8 C -0.369 4.369 9 H 0.099 0.901 10 C 0.042 3.958 11 N -0.858 5.858 12 Si 0.946 3.054 13 H -0.268 1.268 14 H -0.278 1.278 15 H -0.268 1.268 16 C 0.023 3.977 17 Cl -0.025 7.025 18 C -0.157 4.157 19 C 0.115 3.885 20 F -0.134 7.134 21 H 0.075 0.925 22 H 0.069 0.931 23 H 0.078 0.922 24 H 0.160 0.840 25 H 0.272 0.728 26 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.930 -11.305 0.011 11.679 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.128 4.128 3 C -0.055 4.055 4 C -0.087 4.087 5 C 0.272 3.728 6 O -0.426 6.426 7 O -0.112 6.112 8 C -0.445 4.445 9 H 0.117 0.883 10 C -0.164 4.164 11 N -0.494 5.494 12 Si 0.770 3.230 13 H -0.193 1.193 14 H -0.203 1.203 15 H -0.193 1.193 16 C -0.004 4.004 17 Cl 0.004 6.996 18 C -0.177 4.177 19 C 0.095 3.905 20 F -0.112 7.112 21 H 0.094 0.906 22 H 0.088 0.912 23 H 0.097 0.903 24 H 0.177 0.823 25 H 0.082 0.918 26 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -2.664 -11.150 0.014 11.464 hybrid contribution 0.505 0.471 -0.008 0.691 sum -2.158 -10.679 0.006 10.895 Atomic orbital electron populations 1.20730 0.89509 1.03566 1.03042 1.19965 0.97565 0.91411 1.03908 1.21397 0.92286 0.98419 0.93355 1.19314 0.93329 0.91522 1.04576 1.20361 0.86314 0.84805 0.81295 1.90733 1.14088 1.87577 1.50228 1.83872 1.39613 1.12814 1.74852 1.21292 0.91890 0.80327 1.51004 0.88325 1.25383 0.96225 0.98623 0.96119 1.69960 1.07940 1.26295 1.45184 0.85693 0.78807 0.78940 0.79511 1.19347 1.20289 1.19338 1.20623 0.86833 0.92511 1.00465 1.98406 1.06453 1.98675 1.96020 1.20769 0.92205 0.98223 1.06458 1.17423 0.89130 0.81054 1.02852 1.91476 1.79860 1.46128 1.93777 0.90600 0.91246 0.90306 0.82263 0.91772 0.83528 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.27 9.83 36.01 0.35 -0.92 15 2 C -0.13 -1.84 5.88 -104.61 -0.62 -2.46 15 3 C -0.04 -0.62 9.26 -39.18 -0.36 -0.99 15 4 C -0.09 -1.70 5.88 -104.95 -0.62 -2.32 15 5 C 0.42 10.55 7.82 34.49 0.27 10.82 15 6 O -0.53 -13.94 13.21 -19.29 -0.25 -14.19 15 7 O -0.20 -5.66 8.99 -21.75 -0.20 -5.85 15 8 C -0.37 -10.57 9.65 30.94 0.30 -10.27 15 9 H 0.10 2.84 6.86 -52.49 -0.36 2.48 15 10 C 0.04 1.13 5.49 -17.52 -0.10 1.03 15 11 N -0.86 -24.00 13.67 55.49 0.76 -23.24 15 12 Si 0.95 20.66 29.55 -169.99 -5.02 15.63 15 13 H -0.27 -5.76 7.11 56.52 0.40 -5.36 15 14 H -0.28 -5.81 7.11 56.52 0.40 -5.41 15 15 H -0.27 -5.75 7.11 56.52 0.40 -5.35 15 16 C 0.02 0.41 6.35 -39.06 -0.25 0.17 15 17 Cl -0.03 -0.45 26.02 -51.86 -1.35 -1.80 15 18 C -0.16 -2.28 9.79 -39.54 -0.39 -2.67 15 19 C 0.12 1.63 7.25 -39.27 -0.28 1.35 15 20 F -0.13 -1.77 16.46 2.25 0.04 -1.73 15 21 H 0.08 0.78 8.14 -51.93 -0.42 0.36 15 22 H 0.07 0.71 7.62 -51.93 -0.40 0.31 15 23 H 0.08 0.85 8.08 -51.93 -0.42 0.43 15 24 H 0.16 2.85 7.61 -52.49 -0.40 2.45 15 25 H 0.27 7.00 8.31 -40.82 -0.34 6.66 15 26 H 0.15 1.74 8.06 -52.48 -0.42 1.32 15 LS Contribution 261.10 15.07 3.93 3.93 Total: -1.00 -30.28 261.10 -5.34 -35.62 By element: Atomic # 1 Polarization: -0.56 SS G_CDS: -1.55 Total: -2.12 kcal Atomic # 6 Polarization: -4.56 SS G_CDS: -1.69 Total: -6.25 kcal Atomic # 7 Polarization: -24.00 SS G_CDS: 0.76 Total: -23.24 kcal Atomic # 8 Polarization: -19.59 SS G_CDS: -0.45 Total: -20.04 kcal Atomic # 9 Polarization: -1.77 SS G_CDS: 0.04 Total: -1.73 kcal Atomic # 14 Polarization: 20.66 SS G_CDS: -5.02 Total: 15.63 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -1.35 Total: -1.80 kcal Total LS contribution 3.93 Total: 3.93 kcal Total: -30.28 -5.34 -35.62 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000759989581.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.876 kcal (2) G-P(sol) polarization free energy of solvation -30.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.156 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.616 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.492 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds