Wall clock time and date at job start Mon Mar 30 2020 07:07:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35992 * 116.99843 * 2 1 4 4 C 1.38564 * 120.06461 * 359.97438 * 3 2 1 5 5 C 1.38342 * 119.98202 * 180.02562 * 4 3 2 6 6 Cl 1.73604 * 119.93541 * 180.02562 * 5 4 3 7 7 C 1.38356 * 120.12380 * 359.97438 * 5 4 3 8 8 C 1.38240 * 120.13023 * 0.02562 * 7 5 4 9 9 C 1.50706 * 119.99057 * 180.02562 * 8 7 5 10 10 H 1.08998 * 109.46776 * 144.99742 * 9 8 7 11 11 O 1.42896 * 109.47269 * 24.99832 * 9 8 7 12 12 C 1.50696 * 109.47051 * 265.00157 * 9 8 7 13 13 H 1.08002 * 119.99739 * 359.97438 * 12 9 8 14 14 C 1.37871 * 120.00330 * 180.02562 * 12 9 8 15 15 N 1.31522 * 119.99858 * 0.02562 * 14 12 9 16 16 Si 1.86795 * 120.00575 * 179.97438 * 14 12 9 17 17 H 1.48501 * 109.46887 * 60.00036 * 16 14 12 18 18 H 1.48502 * 109.47484 * 180.02562 * 16 14 12 19 19 H 1.48506 * 109.47342 * 300.00212 * 16 14 12 20 20 C 1.38549 * 120.01217 * 359.72419 * 8 7 5 21 21 O 1.36024 * 120.05906 * 180.27382 * 20 8 7 22 22 H 1.09001 * 109.47103 * 60.00803 * 1 2 3 23 23 H 1.09004 * 109.47054 * 180.02562 * 1 2 3 24 24 H 1.09000 * 109.47187 * 300.00363 * 1 2 3 25 25 H 1.07994 * 120.01211 * 359.97438 * 4 3 2 26 26 H 1.08000 * 119.92949 * 180.02562 * 7 5 4 27 27 H 0.96700 * 114.00271 * 300.00652 * 11 9 8 28 28 H 0.96993 * 120.00127 * 180.02562 * 15 14 12 29 29 H 0.96697 * 113.99860 * 270.27735 * 21 20 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2930 2.3746 -0.0005 5 6 1.9228 3.6064 -0.0011 6 17 0.9777 5.0626 -0.0011 7 6 3.3044 3.6798 -0.0005 8 6 4.0608 2.5227 0.0000 9 6 5.5656 2.6064 0.0012 10 1 5.9745 1.7860 0.5909 11 8 5.9730 3.8519 0.5709 12 6 6.0751 2.5107 -1.4138 13 1 5.3789 2.4000 -2.2321 14 6 7.4299 2.5635 -1.6638 15 7 8.2777 2.6969 -0.6672 16 14 8.0615 2.4443 -3.4177 17 1 7.5047 3.5619 -4.2214 18 1 9.5443 2.5256 -3.4165 19 1 7.6378 1.1498 -4.0095 20 6 3.4358 1.2862 0.0058 21 8 4.1792 0.1471 0.0119 22 1 -0.3633 0.5137 -0.8901 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5139 0.8899 25 1 0.2145 2.3195 -0.0014 26 1 3.7928 4.6431 -0.0005 27 1 5.6444 4.6278 0.0963 28 1 9.2309 2.7344 -0.8431 29 1 4.3983 -0.1843 -0.8697 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001536166463.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:07:04 Heat of formation + Delta-G solvation = -113.463659 kcal Electronic energy + Delta-G solvation = -17170.448175 eV Core-core repulsion = 14085.230223 eV Total energy + Delta-G solvation = -3085.217952 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 258.049 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -40.17034 -37.89642 -36.73078 -35.89503 -34.96554 -32.25429 -30.29628 -29.29976 -27.41620 -26.43939 -23.34179 -22.11723 -20.58473 -18.15308 -17.33943 -17.04486 -16.42447 -15.72756 -15.32766 -14.78327 -14.63493 -14.37484 -13.95611 -13.22905 -13.02267 -12.65811 -12.33763 -12.07990 -11.62856 -11.45856 -11.21690 -11.14679 -10.95894 -10.78087 -10.47211 -10.24004 -10.12967 -9.33056 -8.77872 -8.50593 -8.03833 -7.78767 -6.10413 -4.31577 1.43114 1.67575 2.31948 3.24024 3.30176 3.31331 3.36360 3.87223 4.32608 4.69114 5.00418 5.13541 5.15025 5.16548 5.37351 5.45522 5.53207 5.91068 6.02534 6.20427 6.23476 6.55841 6.72943 6.94405 7.40680 7.61819 7.73107 7.98837 8.27474 8.69950 9.21113 9.44545 10.92934 Molecular weight = 258.05amu Principal moments of inertia in cm(-1) A = 0.020552 B = 0.007190 C = 0.006039 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1362.057101 B = 3893.176668 C = 4635.678541 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.305 6.305 3 C 0.107 3.893 4 C -0.212 4.212 5 C -0.004 4.004 6 Cl -0.082 7.082 7 C -0.130 4.130 8 C -0.046 4.046 9 C 0.263 3.737 10 H 0.084 0.916 11 O -0.557 6.557 12 C -0.568 4.568 13 H 0.057 0.943 14 C 0.083 3.917 15 N -0.854 5.854 16 Si 0.894 3.106 17 H -0.275 1.275 18 H -0.285 1.285 19 H -0.275 1.275 20 C 0.085 3.915 21 O -0.478 6.478 22 H 0.053 0.947 23 H 0.097 0.903 24 H 0.053 0.947 25 H 0.133 0.867 26 H 0.136 0.864 27 H 0.346 0.654 28 H 0.264 0.736 29 H 0.389 0.611 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.062 -1.166 -0.388 14.116 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.219 6.219 3 C 0.061 3.939 4 C -0.232 4.232 5 C -0.031 4.031 6 Cl -0.053 7.053 7 C -0.149 4.149 8 C -0.047 4.047 9 C 0.206 3.794 10 H 0.102 0.898 11 O -0.360 6.360 12 C -0.606 4.606 13 H 0.075 0.925 14 C -0.124 4.124 15 N -0.488 5.488 16 Si 0.721 3.279 17 H -0.201 1.201 18 H -0.211 1.211 19 H -0.200 1.200 20 C 0.039 3.961 21 O -0.287 6.287 22 H 0.072 0.928 23 H 0.116 0.884 24 H 0.072 0.928 25 H 0.151 0.849 26 H 0.154 0.846 27 H 0.191 0.809 28 H 0.074 0.926 29 H 0.245 0.755 Dipole moment (debyes) X Y Z Total from point charges -13.601 -1.576 0.727 13.711 hybrid contribution -0.345 0.484 -1.964 2.052 sum -13.946 -1.092 -1.236 14.043 Atomic orbital electron populations 1.23042 0.79119 1.03622 1.01187 1.86167 1.20692 1.26091 1.88914 1.19280 0.91611 0.84142 0.98860 1.20698 0.99865 0.90324 1.12282 1.20536 0.91636 0.86410 1.04476 1.98333 1.72905 1.37018 1.97034 1.20672 0.90536 0.99713 1.03933 1.21668 1.01136 0.90282 0.91647 1.18497 0.80799 0.85251 0.94862 0.89847 1.86655 1.77595 1.15293 1.56482 1.21370 0.92131 1.55334 0.91747 0.92520 1.25020 0.96774 0.93548 0.97067 1.70059 1.02524 1.45495 1.30766 0.86653 0.77804 0.78827 0.84633 1.20063 1.21085 1.20021 1.17579 0.85429 0.87015 1.06085 1.84785 1.71664 1.38790 1.33482 0.92843 0.88419 0.92823 0.84903 0.84584 0.80904 0.92614 0.75529 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.27 9.81 101.05 0.99 1.26 15 2 O -0.31 -4.76 10.28 -34.24 -0.35 -5.12 15 3 C 0.11 1.86 6.70 -39.13 -0.26 1.60 15 4 C -0.21 -3.33 8.82 -39.42 -0.35 -3.67 15 5 C 0.00 -0.07 6.32 -39.50 -0.25 -0.32 15 6 Cl -0.08 -1.16 28.95 -51.86 -1.50 -2.66 15 7 C -0.13 -2.43 9.08 -39.54 -0.36 -2.79 15 8 C -0.05 -0.97 5.01 -104.50 -0.52 -1.50 15 9 C 0.26 6.54 2.79 -29.03 -0.08 6.46 15 10 H 0.08 2.32 7.68 -51.93 -0.40 1.92 15 11 O -0.56 -13.99 12.38 -35.23 -0.44 -14.43 15 12 C -0.57 -14.81 8.74 -34.44 -0.30 -15.11 15 13 H 0.06 1.45 7.74 -52.49 -0.41 1.04 15 14 C 0.08 2.23 5.40 -17.82 -0.10 2.13 15 15 N -0.85 -24.34 12.84 55.43 0.71 -23.62 15 16 Si 0.89 20.38 29.54 -169.99 -5.02 15.36 15 17 H -0.28 -6.22 7.11 56.52 0.40 -5.82 15 18 H -0.29 -6.50 7.11 56.52 0.40 -6.10 15 19 H -0.27 -6.14 7.11 56.52 0.40 -5.74 15 20 C 0.08 1.69 6.69 -39.13 -0.26 1.43 15 21 O -0.48 -9.45 12.42 -34.34 -0.43 -9.88 15 22 H 0.05 0.50 7.66 -51.93 -0.40 0.10 15 23 H 0.10 0.78 8.14 -51.93 -0.42 0.36 15 24 H 0.05 0.51 7.66 -51.93 -0.40 0.11 15 25 H 0.13 1.70 6.30 -52.49 -0.33 1.37 15 26 H 0.14 2.42 6.40 -52.49 -0.34 2.08 15 27 H 0.35 7.57 7.32 45.56 0.33 7.91 15 28 H 0.26 7.15 8.31 -40.82 -0.34 6.81 15 29 H 0.39 6.41 9.06 45.56 0.41 6.82 15 LS Contribution 273.37 15.07 4.12 4.12 Total: -1.00 -30.41 273.37 -5.47 -35.88 By element: Atomic # 1 Polarization: 11.93 SS G_CDS: -1.08 Total: 10.85 kcal Atomic # 6 Polarization: -9.01 SS G_CDS: -1.49 Total: -10.50 kcal Atomic # 7 Polarization: -24.34 SS G_CDS: 0.71 Total: -23.62 kcal Atomic # 8 Polarization: -28.20 SS G_CDS: -1.21 Total: -29.42 kcal Atomic # 14 Polarization: 20.38 SS G_CDS: -5.02 Total: 15.36 kcal Atomic # 17 Polarization: -1.16 SS G_CDS: -1.50 Total: -2.66 kcal Total LS contribution 4.12 Total: 4.12 kcal Total: -30.41 -5.47 -35.88 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001536166463.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.580 kcal (2) G-P(sol) polarization free energy of solvation -30.409 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.474 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.883 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.464 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds