Wall clock time and date at job start Mon Mar 30 2020 06:26:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35952 * 117.00263 * 2 1 4 4 C 1.38961 * 120.05262 * 275.78798 * 3 2 1 5 5 F 1.35093 * 120.03496 * 0.02562 * 4 3 2 6 6 C 1.38292 * 119.92861 * 180.26921 * 4 3 2 7 7 C 1.38300 * 120.04139 * 359.77315 * 6 4 3 8 8 C 1.38330 * 120.10967 * 359.97390 * 7 6 4 9 9 Cl 1.73606 * 119.96188 * 179.97438 * 8 7 6 10 10 C 1.38322 * 120.07118 * 0.02562 * 8 7 6 11 11 C 1.50704 * 120.01962 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47656 * 274.19787 * 11 10 8 13 13 C 1.50693 * 109.47296 * 175.15655 * 12 11 10 14 14 H 1.08007 * 120.00143 * 0.02562 * 13 12 11 15 15 C 1.37880 * 120.00217 * 180.02562 * 13 12 11 16 16 N 1.31514 * 119.99616 * 0.02562 * 15 13 12 17 17 Si 1.86795 * 120.00466 * 180.02562 * 15 13 12 18 18 H 1.48503 * 109.46916 * 59.99725 * 17 15 13 19 19 H 1.48490 * 109.47501 * 180.02562 * 17 15 13 20 20 H 1.48505 * 109.46892 * 300.00277 * 17 15 13 21 21 H 1.08999 * 109.46791 * 55.15311 * 1 2 3 22 22 H 1.09002 * 109.47238 * 175.14523 * 1 2 3 23 23 H 1.08992 * 109.47408 * 295.14477 * 1 2 3 24 24 H 1.07995 * 119.97913 * 179.74476 * 6 4 3 25 25 H 1.07999 * 119.93995 * 179.97438 * 7 6 4 26 26 H 1.09005 * 109.47064 * 154.19604 * 11 10 8 27 27 H 1.09006 * 109.47099 * 34.20511 * 11 10 8 28 28 H 1.09003 * 109.46538 * 55.15916 * 12 11 10 29 29 H 1.08997 * 109.46916 * 295.16114 * 12 11 10 30 30 H 0.97001 * 120.00030 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0462 1.2113 0.0000 4 6 2.2541 1.8864 -1.1967 5 9 1.8425 1.3400 -2.3616 6 6 2.8872 3.1159 -1.1943 7 6 3.3089 3.6752 -0.0018 8 6 3.0981 3.0070 1.1910 9 17 3.6296 3.7123 2.6856 10 6 2.4653 1.7770 1.1939 11 6 2.2368 1.0498 2.4939 12 6 3.4787 0.2275 2.8436 13 6 3.2973 -0.4045 4.1995 14 1 2.3871 -0.2369 4.7561 15 6 4.2934 -1.1969 4.7296 16 7 5.4020 -1.4007 4.0521 17 14 4.0684 -1.9809 6.4101 18 1 2.8781 -2.8686 6.3867 19 1 5.2743 -2.7779 6.7500 20 1 3.8739 -0.9189 7.4297 21 1 -0.3633 0.5872 -0.8434 22 1 -0.3634 -1.0240 -0.0870 23 1 -0.3634 0.4366 0.9302 24 1 3.0529 3.6394 -2.1242 25 1 3.8036 4.6352 -0.0018 26 1 1.3781 0.3860 2.3929 27 1 2.0452 1.7735 3.2863 28 1 4.3527 0.8786 2.8602 29 1 3.6207 -0.5522 2.0953 30 1 6.1027 -1.9584 4.4248 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260926604.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:26:59 Heat of formation + Delta-G solvation = -77.709408 kcal Electronic energy + Delta-G solvation = -16959.345494 eV Core-core repulsion = 13888.050752 eV Total energy + Delta-G solvation = -3071.294742 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 258.056 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -48.83638 -39.83305 -37.43593 -35.94594 -34.08893 -32.08160 -29.84064 -29.01091 -26.83167 -25.15871 -22.40457 -22.36224 -20.39112 -17.85066 -17.18412 -16.82727 -16.21027 -15.92547 -15.25862 -14.79591 -14.45874 -14.42497 -13.75461 -13.33076 -12.99521 -12.66070 -12.40861 -12.24960 -11.89308 -11.41800 -11.18995 -10.96179 -10.85438 -10.65207 -10.43796 -9.96168 -9.80861 -9.65178 -9.08600 -8.49709 -8.30206 -8.29967 -5.95360 -3.97937 0.98059 1.17522 2.37378 3.32438 3.35839 3.40245 3.42544 3.85538 4.24945 4.48898 4.72973 4.99441 5.20233 5.32600 5.39772 5.40549 5.48940 5.69014 5.79996 5.93075 6.02835 6.19236 6.49010 6.60390 6.62303 7.00675 7.56275 7.71410 7.85405 8.03790 8.43259 9.07570 9.65031 11.15825 Molecular weight = 258.06amu Principal moments of inertia in cm(-1) A = 0.021657 B = 0.006764 C = 0.005671 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1292.575387 B = 4138.612571 C = 4935.798164 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.314 6.314 3 C 0.071 3.929 4 C 0.080 3.920 5 F -0.134 7.134 6 C -0.150 4.150 7 C -0.088 4.088 8 C -0.037 4.037 9 Cl -0.048 7.048 10 C -0.039 4.039 11 C -0.079 4.079 12 C 0.036 3.964 13 C -0.519 4.519 14 H 0.055 0.945 15 C 0.059 3.941 16 N -0.893 5.893 17 Si 0.891 3.109 18 H -0.277 1.277 19 H -0.287 1.287 20 H -0.277 1.277 21 H 0.043 0.957 22 H 0.097 0.903 23 H 0.051 0.949 24 H 0.143 0.857 25 H 0.142 0.858 26 H 0.066 0.934 27 H 0.072 0.928 28 H 0.022 0.978 29 H 0.020 0.980 30 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.542 9.902 -9.422 15.611 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.230 6.230 3 C 0.026 3.974 4 C 0.060 3.940 5 F -0.112 7.112 6 C -0.169 4.169 7 C -0.106 4.106 8 C -0.064 4.064 9 Cl -0.018 7.018 10 C -0.040 4.040 11 C -0.117 4.117 12 C -0.001 4.001 13 C -0.557 4.557 14 H 0.073 0.927 15 C -0.143 4.143 16 N -0.532 5.532 17 Si 0.719 3.281 18 H -0.203 1.203 19 H -0.213 1.213 20 H -0.203 1.203 21 H 0.061 0.939 22 H 0.115 0.885 23 H 0.069 0.931 24 H 0.161 0.839 25 H 0.160 0.840 26 H 0.085 0.915 27 H 0.090 0.910 28 H 0.041 0.959 29 H 0.038 0.962 30 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -7.261 9.663 -9.319 15.263 hybrid contribution -0.147 -0.383 0.725 0.833 sum -7.408 9.280 -8.594 14.658 Atomic orbital electron populations 1.23040 0.79001 1.03489 1.00555 1.86182 1.19778 1.23140 1.93884 1.18326 1.00973 0.87801 0.90287 1.18156 1.01220 0.93408 0.81202 1.91474 1.88328 1.85565 1.45876 1.20838 1.01960 0.94729 0.99355 1.20867 0.99531 1.00429 0.89813 1.20697 1.02323 0.95051 0.88331 1.98384 1.88422 1.82919 1.32125 1.20458 0.94591 0.91955 0.96997 1.20911 1.02621 0.98485 0.89637 1.19020 0.90542 0.94104 0.96453 1.21132 1.02369 1.29704 1.02490 0.92718 1.24989 0.95267 0.96522 0.97485 1.69962 1.06606 1.38744 1.37886 0.86675 0.77448 0.79410 0.84564 1.20261 1.21306 1.20268 0.93878 0.88483 0.93074 0.83887 0.84024 0.91547 0.90980 0.95936 0.96192 0.92960 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.45 10.90 101.05 1.10 1.55 16 2 O -0.31 -5.68 9.33 -19.59 -0.18 -5.86 16 3 C 0.07 1.26 5.70 -39.18 -0.22 1.04 16 4 C 0.08 1.24 7.31 -39.29 -0.29 0.95 16 5 F -0.13 -2.05 17.11 2.25 0.04 -2.01 16 6 C -0.15 -1.92 10.02 -39.54 -0.40 -2.32 16 7 C -0.09 -1.16 9.82 -39.52 -0.39 -1.55 16 8 C -0.04 -0.61 6.31 -39.52 -0.25 -0.86 16 9 Cl -0.05 -0.79 27.29 -51.86 -1.41 -2.21 16 10 C -0.04 -0.72 5.15 -104.45 -0.54 -1.25 16 11 C -0.08 -1.67 4.63 -27.88 -0.13 -1.80 16 12 C 0.04 0.94 4.95 -27.89 -0.14 0.80 16 13 C -0.52 -14.73 9.11 -34.44 -0.31 -15.04 16 14 H 0.05 1.49 7.74 -52.48 -0.41 1.09 16 15 C 0.06 1.70 5.46 -17.82 -0.10 1.60 16 16 N -0.89 -27.17 13.29 55.43 0.74 -26.43 16 17 Si 0.89 21.81 29.54 -169.99 -5.02 16.79 16 18 H -0.28 -6.65 7.11 56.52 0.40 -6.24 16 19 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 20 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 21 H 0.04 0.50 8.14 -51.93 -0.42 0.08 16 22 H 0.10 1.10 8.14 -51.93 -0.42 0.67 16 23 H 0.05 0.65 7.74 -51.93 -0.40 0.24 16 24 H 0.14 1.38 8.06 -52.49 -0.42 0.95 16 25 H 0.14 1.45 8.06 -52.49 -0.42 1.02 16 26 H 0.07 1.36 6.80 -51.93 -0.35 1.01 16 27 H 0.07 1.47 7.09 -51.93 -0.37 1.10 16 28 H 0.02 0.62 8.05 -51.93 -0.42 0.20 16 29 H 0.02 0.57 8.14 -51.93 -0.42 0.15 16 30 H 0.26 7.50 8.31 -40.82 -0.34 7.17 16 LS Contribution 283.51 15.07 4.27 4.27 Total: -1.00 -31.27 283.51 -6.43 -37.69 By element: Atomic # 1 Polarization: -2.16 SS G_CDS: -3.20 Total: -5.36 kcal Atomic # 6 Polarization: -15.22 SS G_CDS: -1.66 Total: -16.88 kcal Atomic # 7 Polarization: -27.17 SS G_CDS: 0.74 Total: -26.43 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -0.18 Total: -5.86 kcal Atomic # 9 Polarization: -2.05 SS G_CDS: 0.04 Total: -2.01 kcal Atomic # 14 Polarization: 21.81 SS G_CDS: -5.02 Total: 16.79 kcal Atomic # 17 Polarization: -0.79 SS G_CDS: -1.41 Total: -2.21 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -31.27 -6.43 -37.69 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260926604.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.016 kcal (2) G-P(sol) polarization free energy of solvation -31.266 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.282 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.693 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds