Wall clock time and date at job start Mon Mar 30 2020 06:54:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35916 * 117.00002 * 2 1 4 4 C 1.38748 * 120.03284 * 0.02562 * 3 2 1 5 5 C 1.38145 * 120.00408 * 179.97438 * 4 3 2 6 6 C 1.38332 * 120.06822 * 0.02562 * 5 4 3 7 7 Cl 1.73601 * 119.97062 * 180.02562 * 6 5 4 8 8 C 1.38565 * 120.06232 * 359.74519 * 6 5 4 9 9 F 1.35104 * 120.00595 * 180.27805 * 8 6 5 10 10 C 1.38369 * 119.99502 * 0.50624 * 8 6 5 11 11 C 1.50703 * 120.03685 * 179.76710 * 10 8 6 12 12 H 1.08994 * 109.47275 * 164.72947 * 11 10 8 13 13 N 1.46898 * 109.46797 * 44.72463 * 11 10 8 14 14 C 1.50700 * 109.47148 * 284.72724 * 11 10 8 15 15 H 1.08002 * 119.99770 * 0.02562 * 14 11 10 16 16 C 1.37871 * 120.00083 * 179.97438 * 14 11 10 17 17 N 1.31514 * 120.00147 * 0.02562 * 16 14 11 18 18 Si 1.86803 * 120.00278 * 180.02562 * 16 14 11 19 19 H 1.48494 * 109.47228 * 179.97438 * 18 16 14 20 20 H 1.48501 * 109.46793 * 300.00001 * 18 16 14 21 21 H 1.48500 * 109.47000 * 60.00094 * 18 16 14 22 22 H 1.08997 * 109.47219 * 180.02562 * 1 2 3 23 23 H 1.08997 * 109.46956 * 300.00094 * 1 2 3 24 24 H 1.09002 * 109.46832 * 59.99733 * 1 2 3 25 25 H 1.07995 * 119.99714 * 359.95697 * 4 3 2 26 26 H 1.07999 * 119.96561 * 180.02562 * 5 4 3 27 27 H 1.00892 * 111.00332 * 300.00256 * 13 11 10 28 28 H 1.00905 * 110.99665 * 63.96030 * 13 11 10 29 29 H 0.97005 * 119.99661 * 359.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0461 1.2110 0.0000 4 6 1.2911 2.3751 0.0005 5 6 1.9189 3.6057 0.0011 6 6 3.3003 3.6790 0.0005 7 17 4.0865 5.2267 0.0019 8 6 4.0570 2.5183 0.0048 9 9 5.4061 2.5912 0.0099 10 6 3.4309 1.2843 -0.0010 11 6 4.2531 0.0213 -0.0017 12 1 3.6195 -0.8248 0.2643 13 7 5.3414 0.1450 0.9772 14 6 4.8348 -0.1987 -1.3744 15 1 4.6300 0.5058 -2.1669 16 6 5.6292 -1.2988 -1.6182 17 7 5.8790 -2.1565 -0.6530 18 14 6.3509 -1.5712 -3.3196 19 1 7.1619 -2.8151 -3.3199 20 1 5.2510 -1.6965 -4.3094 21 1 7.2138 -0.4182 -3.6816 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 0.2126 2.3191 0.0003 26 1 1.3306 4.5114 0.0019 27 1 5.9432 0.9229 0.7525 28 1 4.9769 0.2287 1.9144 29 1 5.5046 -2.0149 0.2306 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259990865.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:54:26 Heat of formation + Delta-G solvation = -61.265856 kcal Electronic energy + Delta-G solvation = -17569.388156 eV Core-core repulsion = 14433.380549 eV Total energy + Delta-G solvation = -3136.007607 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.54469 -39.97768 -37.33866 -36.18588 -34.84422 -31.53990 -29.74641 -29.50395 -27.12964 -25.58315 -23.07184 -22.02807 -20.74920 -18.17782 -17.20647 -16.68022 -15.86333 -15.79348 -15.64316 -15.09797 -14.61123 -14.12894 -13.81076 -13.50448 -12.86618 -12.75769 -12.53704 -12.50319 -11.96250 -11.64758 -11.38569 -11.12473 -10.85485 -10.66673 -10.47768 -10.16671 -9.98628 -8.95520 -8.29950 -8.23163 -7.83956 -7.45409 -6.13076 -3.95105 1.27921 1.39290 2.24542 3.37776 3.51499 3.54371 3.70708 3.72866 4.49476 4.65418 4.81539 4.99458 5.18145 5.21624 5.41232 5.51088 5.53184 5.62467 5.95547 6.04774 6.15063 6.27756 6.40648 6.85254 7.23135 7.53625 8.00409 8.32609 8.69314 8.82525 9.09795 9.87437 11.27298 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.018124 B = 0.008766 C = 0.006808 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1544.530671 B = 3193.418940 C = 4111.789477 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.293 6.293 3 C 0.157 3.843 4 C -0.213 4.213 5 C -0.067 4.067 6 C -0.111 4.111 7 Cl -0.067 7.067 8 C 0.146 3.854 9 F -0.112 7.112 10 C -0.126 4.126 11 C 0.249 3.751 12 H 0.054 0.946 13 N -0.836 5.836 14 C -0.605 4.605 15 H 0.044 0.956 16 C 0.041 3.959 17 N -0.889 5.889 18 Si 1.063 2.937 19 H -0.283 1.283 20 H -0.290 1.290 21 H -0.289 1.289 22 H 0.100 0.900 23 H 0.052 0.948 24 H 0.054 0.946 25 H 0.136 0.864 26 H 0.137 0.863 27 H 0.335 0.665 28 H 0.299 0.701 29 H 0.290 0.710 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.877 10.047 2.619 15.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.206 6.206 3 C 0.110 3.890 4 C -0.233 4.233 5 C -0.086 4.086 6 C -0.139 4.139 7 Cl -0.039 7.039 8 C 0.126 3.874 9 F -0.090 7.090 10 C -0.131 4.131 11 C 0.140 3.860 12 H 0.072 0.928 13 N -0.367 5.367 14 C -0.644 4.644 15 H 0.062 0.938 16 C -0.169 4.169 17 N -0.523 5.523 18 Si 0.892 3.108 19 H -0.208 1.208 20 H -0.217 1.217 21 H -0.216 1.216 22 H 0.118 0.882 23 H 0.071 0.929 24 H 0.073 0.927 25 H 0.154 0.846 26 H 0.155 0.845 27 H 0.152 0.848 28 H 0.110 0.890 29 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -9.465 8.214 1.505 12.622 hybrid contribution -1.440 2.493 1.011 3.052 sum -10.905 10.707 2.515 15.489 Atomic orbital electron populations 1.23084 0.78952 1.04021 1.00914 1.86254 1.20628 1.25888 1.87783 1.18627 0.91294 0.84377 0.94734 1.21139 1.00174 0.91515 1.10425 1.20451 0.91199 0.98023 0.98942 1.20804 0.93317 0.85605 1.14155 1.98337 1.80873 1.27306 1.97365 1.16869 0.77473 0.91478 1.01607 1.91413 1.27937 1.96408 1.93243 1.21038 0.92494 0.97916 1.01606 1.18256 0.87299 0.86781 0.93698 0.92821 1.59501 1.22269 1.51679 1.03219 1.21599 1.36715 1.12674 0.93394 0.93815 1.25580 0.94463 0.92410 1.04474 1.70541 1.41139 1.36069 1.04550 0.83660 0.76310 0.76154 0.74656 1.20823 1.21697 1.21584 0.88152 0.92941 0.92701 0.84625 0.84507 0.84796 0.89023 0.89753 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.30 9.81 101.05 0.99 1.29 15 2 O -0.29 -5.29 9.33 -19.48 -0.18 -5.47 15 3 C 0.16 2.90 6.66 -39.23 -0.26 2.64 15 4 C -0.21 -3.12 9.04 -39.43 -0.36 -3.47 15 5 C -0.07 -0.97 9.82 -39.58 -0.39 -1.36 15 6 C -0.11 -1.89 6.33 -39.43 -0.25 -2.14 15 7 Cl -0.07 -1.03 28.61 -51.86 -1.48 -2.51 15 8 C 0.15 2.97 6.99 -39.41 -0.28 2.69 15 9 F -0.11 -2.42 13.88 2.25 0.03 -2.39 15 10 C -0.13 -2.73 4.89 -104.41 -0.51 -3.24 15 11 C 0.25 6.32 2.28 -70.02 -0.16 6.16 15 12 H 0.05 1.47 7.01 -51.93 -0.36 1.11 15 13 N -0.84 -20.25 7.67 -6.65 -0.05 -20.30 15 14 C -0.61 -17.33 8.65 -34.44 -0.30 -17.62 15 15 H 0.04 1.28 7.74 -52.49 -0.41 0.87 15 16 C 0.04 1.19 5.39 -17.82 -0.10 1.09 15 17 N -0.89 -27.28 13.51 55.43 0.75 -26.53 15 18 Si 1.06 25.91 29.90 -169.99 -5.08 20.83 15 19 H -0.28 -6.87 7.11 56.52 0.40 -6.46 15 20 H -0.29 -6.76 7.11 56.52 0.40 -6.36 15 21 H -0.29 -6.85 7.11 56.52 0.40 -6.45 15 22 H 0.10 0.99 8.14 -51.93 -0.42 0.56 15 23 H 0.05 0.50 7.66 -51.93 -0.40 0.10 15 24 H 0.05 0.56 7.66 -51.93 -0.40 0.16 15 25 H 0.14 1.49 6.30 -52.49 -0.33 1.16 15 26 H 0.14 1.52 8.06 -52.49 -0.42 1.09 15 27 H 0.33 8.08 6.11 -39.30 -0.24 7.84 15 28 H 0.30 6.42 9.06 -39.29 -0.36 6.06 15 29 H 0.29 8.90 6.39 -40.82 -0.26 8.64 15 LS Contribution 268.20 15.07 4.04 4.04 Total: -1.00 -31.97 268.20 -5.98 -37.94 By element: Atomic # 1 Polarization: 10.74 SS G_CDS: -2.39 Total: 8.34 kcal Atomic # 6 Polarization: -12.36 SS G_CDS: -1.60 Total: -13.96 kcal Atomic # 7 Polarization: -47.52 SS G_CDS: 0.70 Total: -46.82 kcal Atomic # 8 Polarization: -5.29 SS G_CDS: -0.18 Total: -5.47 kcal Atomic # 9 Polarization: -2.42 SS G_CDS: 0.03 Total: -2.39 kcal Atomic # 14 Polarization: 25.91 SS G_CDS: -5.08 Total: 20.83 kcal Atomic # 17 Polarization: -1.03 SS G_CDS: -1.48 Total: -2.51 kcal Total LS contribution 4.04 Total: 4.04 kcal Total: -31.97 -5.98 -37.94 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259990865.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.323 kcal (2) G-P(sol) polarization free energy of solvation -31.966 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.289 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.977 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.943 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.266 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds