Wall clock time and date at job start Mon Mar 30 2020 06:55:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35920 * 116.99969 * 2 1 4 4 C 1.38682 * 120.04406 * 359.97352 * 3 2 1 5 5 C 1.38370 * 119.92784 * 179.72964 * 4 3 2 6 6 F 1.35106 * 119.98371 * 180.31715 * 5 4 3 7 7 C 1.38497 * 120.02614 * 0.56717 * 5 4 3 8 8 C 1.50700 * 119.95036 * 179.73030 * 7 5 4 9 9 H 1.08994 * 109.47551 * 39.72328 * 8 7 5 10 10 N 1.46900 * 109.47395 * 159.72790 * 8 7 5 11 11 C 1.50702 * 109.46869 * 279.72382 * 8 7 5 12 12 H 1.08002 * 120.00299 * 0.02562 * 11 8 7 13 13 C 1.37884 * 119.99942 * 179.72213 * 11 8 7 14 14 N 1.31514 * 119.99698 * 0.28408 * 13 11 8 15 15 Si 1.86794 * 119.99837 * 180.27476 * 13 11 8 16 16 H 1.48501 * 109.47188 * 90.00793 * 15 13 11 17 17 H 1.48501 * 109.47085 * 210.00372 * 15 13 11 18 18 H 1.48498 * 109.47634 * 330.00608 * 15 13 11 19 19 C 1.38216 * 120.09465 * 359.45202 * 7 5 4 20 20 C 1.38257 * 120.06763 * 0.25123 * 19 7 5 21 21 Cl 1.73598 * 120.01441 * 180.02562 * 20 19 7 22 22 H 1.08997 * 109.47062 * 300.00666 * 1 2 3 23 23 H 1.09003 * 109.46695 * 60.00052 * 1 2 3 24 24 H 1.08999 * 109.46783 * 179.97438 * 1 2 3 25 25 H 1.07992 * 120.03591 * 0.02562 * 4 3 2 26 26 H 1.00903 * 111.00086 * 59.99217 * 10 8 7 27 27 H 1.00902 * 111.00206 * 183.95155 * 10 8 7 28 28 H 0.97005 * 119.99651 * 179.97438 * 14 13 11 29 29 H 1.07999 * 119.96530 * 180.27160 * 19 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0461 1.2111 0.0000 4 6 1.2917 2.3747 -0.0006 5 6 1.9223 3.6063 0.0051 6 9 1.1885 4.7407 0.0110 7 6 3.3055 3.6767 -0.0006 8 6 3.9906 5.0190 -0.0005 9 1 3.4546 5.7005 0.6599 10 7 5.3724 4.8636 0.4732 11 6 3.9993 5.5785 -1.3998 12 1 3.5530 5.0183 -2.2082 13 6 4.5715 6.8084 -1.6469 14 7 5.1146 7.4907 -0.6625 15 14 4.5754 7.5053 -3.3800 16 1 3.3468 8.3120 -3.5920 17 1 5.7710 8.3667 -3.5644 18 1 4.6117 6.3915 -4.3615 19 6 4.0584 2.5176 -0.0004 20 6 3.4324 1.2849 0.0001 21 17 4.3794 -0.1700 0.0010 22 1 -0.3633 0.5139 0.8899 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 0.2132 2.3197 -0.0006 26 1 5.8906 4.2358 -0.1230 27 1 5.8333 5.7584 0.5437 28 1 5.5175 8.3558 -0.8365 29 1 5.1369 2.5749 -0.0004 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259996122.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:55:12 Heat of formation + Delta-G solvation = -67.633984 kcal Electronic energy + Delta-G solvation = -17142.400325 eV Core-core repulsion = 14006.116575 eV Total energy + Delta-G solvation = -3136.283750 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.28045 -39.86915 -37.49187 -36.10461 -34.43280 -31.58863 -30.13209 -29.09425 -27.39407 -25.83280 -23.05789 -22.26858 -20.26170 -18.28193 -16.81157 -16.66596 -15.86515 -15.77403 -15.61989 -14.81787 -14.48729 -14.35510 -14.03724 -13.18303 -12.93558 -12.71633 -12.70118 -12.39267 -11.53156 -11.37206 -11.33011 -11.11382 -10.90785 -10.84179 -10.57748 -10.45415 -9.97469 -9.78478 -8.73071 -8.43921 -7.69955 -7.28808 -6.15593 -4.32118 1.40097 1.65572 2.48828 3.20541 3.27670 3.28521 3.31319 3.89681 4.30447 4.68361 4.93752 5.06223 5.07395 5.12880 5.36088 5.41173 5.56179 5.77988 6.03838 6.27378 6.36304 6.67638 6.78429 7.01793 7.39961 7.51861 7.68036 7.97037 8.56398 8.82052 9.00232 9.39399 10.82861 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.025210 B = 0.006541 C = 0.005865 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1110.413436 B = 4279.701082 C = 4773.237733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.306 6.306 3 C 0.135 3.865 4 C -0.240 4.240 5 C 0.141 3.859 6 F -0.126 7.126 7 C -0.084 4.084 8 C 0.246 3.754 9 H 0.056 0.944 10 N -0.850 5.850 11 C -0.545 4.545 12 H 0.056 0.944 13 C 0.069 3.931 14 N -0.892 5.892 15 Si 0.899 3.101 16 H -0.279 1.279 17 H -0.285 1.285 18 H -0.273 1.273 19 C -0.040 4.040 20 C -0.078 4.078 21 Cl -0.069 7.069 22 H 0.055 0.945 23 H 0.055 0.945 24 H 0.098 0.902 25 H 0.140 0.860 26 H 0.312 0.688 27 H 0.359 0.641 28 H 0.267 0.733 29 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.985 -11.717 1.367 13.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.220 6.220 3 C 0.089 3.911 4 C -0.259 4.259 5 C 0.121 3.879 6 F -0.105 7.105 7 C -0.086 4.086 8 C 0.136 3.864 9 H 0.073 0.927 10 N -0.381 5.381 11 C -0.584 4.584 12 H 0.074 0.926 13 C -0.134 4.134 14 N -0.530 5.530 15 Si 0.726 3.274 16 H -0.204 1.204 17 H -0.211 1.211 18 H -0.198 1.198 19 C -0.058 4.058 20 C -0.106 4.106 21 Cl -0.040 7.040 22 H 0.074 0.926 23 H 0.074 0.926 24 H 0.117 0.883 25 H 0.158 0.842 26 H 0.122 0.878 27 H 0.176 0.824 28 H 0.077 0.923 29 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -6.083 -12.102 2.093 13.706 hybrid contribution -0.173 1.140 -1.940 2.257 sum -6.256 -10.962 0.153 12.623 Atomic orbital electron populations 1.23055 0.78618 1.03719 1.01481 1.86132 1.21101 1.25815 1.88903 1.18139 0.90124 0.84257 0.98535 1.20924 1.00495 0.90750 1.13773 1.17281 0.89044 0.81343 1.00251 1.91506 1.76735 1.48967 1.93262 1.20518 0.91192 0.98496 0.98423 1.17864 0.87716 0.85854 0.94947 0.92655 1.59556 1.04767 1.18964 1.54775 1.21726 1.38765 1.03807 0.94121 0.92572 1.24994 0.94687 0.96206 0.97538 1.69733 1.38080 1.14041 1.31192 0.86476 0.77682 0.79025 0.84179 1.20448 1.21053 1.19796 1.20661 1.01261 0.87934 0.95993 1.20149 0.88268 0.88546 1.13618 1.98322 1.71916 1.36489 1.97319 0.92623 0.92619 0.88314 0.84237 0.87781 0.82369 0.92317 0.83207 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.26 9.81 101.05 0.99 1.25 15 2 O -0.31 -4.40 9.95 -19.49 -0.19 -4.60 15 3 C 0.14 2.23 6.68 -39.20 -0.26 1.97 15 4 C -0.24 -3.96 9.02 -39.37 -0.35 -4.32 15 5 C 0.14 2.80 7.23 -39.44 -0.29 2.52 15 6 F -0.13 -2.66 16.65 2.25 0.04 -2.63 15 7 C -0.08 -1.79 5.03 -104.53 -0.53 -2.32 15 8 C 0.25 6.02 2.66 -70.02 -0.19 5.83 15 9 H 0.06 1.51 7.93 -51.93 -0.41 1.10 15 10 N -0.85 -19.46 8.67 -6.65 -0.06 -19.52 15 11 C -0.54 -14.41 8.70 -34.44 -0.30 -14.71 15 12 H 0.06 1.51 7.74 -52.49 -0.41 1.11 15 13 C 0.07 1.82 5.38 -17.82 -0.10 1.72 15 14 N -0.89 -24.12 11.55 55.43 0.64 -23.48 15 15 Si 0.90 20.77 29.54 -169.99 -5.02 15.75 15 16 H -0.28 -6.46 7.11 56.52 0.40 -6.06 15 17 H -0.28 -6.50 7.11 56.52 0.40 -6.10 15 18 H -0.27 -6.29 7.11 56.52 0.40 -5.89 15 19 C -0.04 -0.75 9.03 -39.58 -0.36 -1.11 15 20 C -0.08 -1.36 6.33 -39.36 -0.25 -1.61 15 21 Cl -0.07 -1.07 28.50 -51.86 -1.48 -2.55 15 22 H 0.06 0.50 7.66 -51.93 -0.40 0.10 15 23 H 0.06 0.51 7.66 -51.93 -0.40 0.11 15 24 H 0.10 0.72 8.14 -51.93 -0.42 0.29 15 25 H 0.14 1.89 6.30 -52.49 -0.33 1.56 15 26 H 0.31 6.69 7.28 -39.29 -0.29 6.40 15 27 H 0.36 8.85 7.09 -39.29 -0.28 8.57 15 28 H 0.27 6.90 8.31 -40.82 -0.34 6.57 15 29 H 0.15 2.73 6.24 -52.49 -0.33 2.40 15 LS Contribution 270.41 15.07 4.07 4.07 Total: -1.00 -27.56 270.41 -6.02 -33.57 By element: Atomic # 1 Polarization: 12.55 SS G_CDS: -2.39 Total: 10.15 kcal Atomic # 6 Polarization: -9.15 SS G_CDS: -1.63 Total: -10.77 kcal Atomic # 7 Polarization: -43.58 SS G_CDS: 0.58 Total: -43.00 kcal Atomic # 8 Polarization: -4.40 SS G_CDS: -0.19 Total: -4.60 kcal Atomic # 9 Polarization: -2.66 SS G_CDS: 0.04 Total: -2.63 kcal Atomic # 14 Polarization: 20.77 SS G_CDS: -5.02 Total: 15.75 kcal Atomic # 17 Polarization: -1.07 SS G_CDS: -1.48 Total: -2.55 kcal Total LS contribution 4.07 Total: 4.07 kcal Total: -27.56 -6.02 -33.57 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259996122.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.062 kcal (2) G-P(sol) polarization free energy of solvation -27.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.617 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.017 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.572 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.634 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds