Wall clock time and date at job start Mon Mar 30 2020 06:56:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35975 * 116.99960 * 2 1 4 4 C 1.38833 * 120.02946 * 269.97666 * 3 2 1 5 5 Cl 1.73603 * 120.02961 * 359.97438 * 4 3 2 6 6 C 1.38221 * 119.94853 * 180.02562 * 4 3 2 7 7 C 1.38477 * 120.01464 * 359.97438 * 6 4 3 8 8 F 1.35102 * 119.96410 * 179.97438 * 7 6 4 9 9 C 1.38432 * 120.06979 * 359.75241 * 7 6 4 10 10 C 1.38200 * 120.04628 * 0.50096 * 9 7 6 11 11 C 1.50696 * 120.00526 * 179.77304 * 10 9 7 12 12 H 1.09001 * 109.47545 * 144.72737 * 11 10 9 13 13 N 1.46900 * 109.47209 * 24.72435 * 11 10 9 14 14 C 1.50706 * 109.47259 * 264.72397 * 11 10 9 15 15 H 1.08005 * 119.99758 * 0.02562 * 14 11 10 16 16 C 1.37871 * 120.00102 * 180.02562 * 14 11 10 17 17 N 1.31516 * 120.00217 * 0.02562 * 16 14 11 18 18 Si 1.86800 * 119.99766 * 179.97438 * 16 14 11 19 19 H 1.48501 * 109.47483 * 269.99808 * 18 16 14 20 20 H 1.48499 * 109.47134 * 30.00322 * 18 16 14 21 21 H 1.48507 * 109.46904 * 150.00145 * 18 16 14 22 22 H 1.09001 * 109.47113 * 180.02562 * 1 2 3 23 23 H 1.09002 * 109.47507 * 300.00167 * 1 2 3 24 24 H 1.08998 * 109.47284 * 60.00391 * 1 2 3 25 25 H 1.07992 * 119.99551 * 179.97438 * 6 4 3 26 26 H 1.07994 * 119.97288 * 180.25207 * 9 7 6 27 27 H 1.00900 * 111.00100 * 299.99420 * 13 11 10 28 28 H 1.00898 * 111.00378 * 63.95632 * 13 11 10 29 29 H 0.97001 * 119.99646 * 359.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0462 1.2116 0.0000 4 6 2.3621 1.8304 -1.2020 5 17 1.9699 1.0578 -2.7063 6 6 2.9901 3.0617 -1.2000 7 6 3.3033 3.6776 0.0000 8 9 3.9176 4.8809 0.0007 9 6 2.9836 3.0638 1.1989 10 6 2.3604 1.8303 1.2002 11 6 2.0174 1.1606 2.5058 12 1 1.0785 0.6172 2.3999 13 7 1.8786 2.1779 3.5564 14 6 3.1151 0.1982 2.8804 15 1 3.9752 0.0834 2.2374 16 6 3.0212 -0.5356 4.0438 17 7 1.9735 -0.3962 4.8265 18 14 4.3814 -1.7290 4.5076 19 1 4.0840 -3.0660 3.9337 20 1 5.6758 -1.2369 3.9715 21 1 4.4656 -1.8329 5.9867 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3634 0.5139 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 3.2365 3.5436 -2.1345 26 1 3.2250 3.5474 2.1339 27 1 2.7367 2.6956 3.6740 28 1 1.1066 2.7972 3.3603 29 1 1.2670 0.2232 4.5854 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260033516.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:56:20 Heat of formation + Delta-G solvation = -63.184992 kcal Electronic energy + Delta-G solvation = -17423.197821 eV Core-core repulsion = 14287.106994 eV Total energy + Delta-G solvation = -3136.090827 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.80212 -39.85733 -36.93032 -36.52419 -34.89161 -31.69161 -29.64456 -29.55656 -26.63207 -25.76676 -23.36218 -22.08506 -20.69983 -17.72792 -17.26504 -16.99299 -16.63671 -15.61013 -15.10544 -14.86770 -14.47016 -14.29543 -13.89349 -13.61600 -13.56353 -13.04248 -12.74824 -12.14555 -11.95791 -11.44880 -11.32773 -10.97457 -10.86860 -10.71191 -10.36894 -10.06756 -9.65614 -9.10706 -8.44696 -8.36702 -8.08292 -7.70896 -6.23168 -4.05664 1.09161 1.29206 2.13015 3.45777 3.49406 3.51362 3.66744 4.06112 4.40087 4.58790 4.86910 5.11128 5.33444 5.38263 5.51409 5.55198 5.62576 5.83828 5.87182 5.92054 6.09061 6.32207 6.45490 6.79053 7.02863 7.75072 7.86855 8.15557 8.55523 8.60334 8.98983 9.75717 11.17232 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.019935 B = 0.007859 C = 0.006669 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1404.197189 B = 3561.930091 C = 4197.611153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.308 6.308 3 C 0.099 3.901 4 C -0.029 4.029 5 Cl -0.060 7.060 6 C -0.162 4.162 7 C 0.105 3.895 8 F -0.138 7.138 9 C -0.150 4.150 10 C -0.045 4.045 11 C 0.244 3.756 12 H 0.051 0.949 13 N -0.830 5.830 14 C -0.600 4.600 15 H 0.048 0.952 16 C 0.041 3.959 17 N -0.890 5.890 18 Si 1.067 2.933 19 H -0.288 1.288 20 H -0.290 1.290 21 H -0.285 1.285 22 H 0.094 0.906 23 H 0.047 0.953 24 H 0.040 0.960 25 H 0.142 0.858 26 H 0.140 0.860 27 H 0.328 0.672 28 H 0.303 0.697 29 H 0.288 0.712 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.916 5.867 -11.104 12.704 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.224 6.224 3 C 0.053 3.947 4 C -0.056 4.056 5 Cl -0.031 7.031 6 C -0.182 4.182 7 C 0.086 3.914 8 F -0.117 7.117 9 C -0.169 4.169 10 C -0.048 4.048 11 C 0.135 3.865 12 H 0.068 0.932 13 N -0.358 5.358 14 C -0.639 4.639 15 H 0.066 0.934 16 C -0.169 4.169 17 N -0.523 5.523 18 Si 0.896 3.104 19 H -0.215 1.215 20 H -0.217 1.217 21 H -0.211 1.211 22 H 0.113 0.887 23 H 0.066 0.934 24 H 0.058 0.942 25 H 0.159 0.841 26 H 0.158 0.842 27 H 0.142 0.858 28 H 0.114 0.886 29 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.541 3.961 -9.563 10.465 hybrid contribution -0.192 2.188 -2.255 3.148 sum -1.733 6.149 -11.818 13.435 Atomic orbital electron populations 1.22952 0.79391 1.03327 1.00063 1.86166 1.19261 1.23052 1.93898 1.18272 0.99211 0.87394 0.89810 1.21079 1.03468 0.94121 0.86954 1.98345 1.92695 1.80975 1.31090 1.20614 1.04329 0.95285 0.97951 1.17404 0.97876 0.82282 0.93887 1.91484 1.80523 1.42310 1.97392 1.21009 1.02024 0.96636 0.97215 1.21823 0.92736 0.91655 0.98622 1.18384 0.98616 0.89647 0.79823 0.93173 1.59446 1.07642 1.19019 1.49716 1.21562 1.06475 1.25362 1.10467 0.93394 1.25610 1.00679 0.97862 0.92707 1.70544 1.08545 1.35379 1.37880 0.83589 0.74885 0.75794 0.76113 1.21506 1.21666 1.21116 0.88715 0.93423 0.94160 0.84059 0.84230 0.85773 0.88564 0.89896 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.57 10.80 101.05 1.09 1.66 15 2 O -0.31 -6.04 9.15 -19.66 -0.18 -6.22 15 3 C 0.10 1.90 5.69 -39.22 -0.22 1.68 15 4 C -0.03 -0.48 6.33 -39.37 -0.25 -0.73 15 5 Cl -0.06 -0.88 28.50 -51.86 -1.48 -2.36 15 6 C -0.16 -2.49 9.80 -39.50 -0.39 -2.88 15 7 C 0.11 1.71 7.30 -39.42 -0.29 1.43 15 8 F -0.14 -2.16 17.27 2.25 0.04 -2.12 15 9 C -0.15 -2.67 9.24 -39.52 -0.37 -3.04 15 10 C -0.04 -0.91 5.00 -104.49 -0.52 -1.43 15 11 C 0.24 5.68 2.19 -70.02 -0.15 5.53 15 12 H 0.05 1.26 6.28 -51.93 -0.33 0.93 15 13 N -0.83 -17.73 7.39 -6.65 -0.05 -17.78 15 14 C -0.60 -16.25 8.71 -34.44 -0.30 -16.55 15 15 H 0.05 1.35 7.74 -52.48 -0.41 0.94 15 16 C 0.04 1.15 5.39 -17.82 -0.10 1.05 15 17 N -0.89 -26.01 13.51 55.43 0.75 -25.26 15 18 Si 1.07 25.12 29.90 -169.99 -5.08 20.04 15 19 H -0.29 -6.61 7.11 56.52 0.40 -6.21 15 20 H -0.29 -6.61 7.11 56.52 0.40 -6.21 15 21 H -0.29 -6.70 7.11 56.52 0.40 -6.29 15 22 H 0.09 1.28 8.14 -51.93 -0.42 0.86 15 23 H 0.05 0.75 7.17 -51.93 -0.37 0.38 15 24 H 0.04 0.54 8.14 -51.93 -0.42 0.12 15 25 H 0.14 1.81 8.06 -52.49 -0.42 1.38 15 26 H 0.14 2.35 6.28 -52.49 -0.33 2.02 15 27 H 0.33 6.74 7.21 -39.29 -0.28 6.46 15 28 H 0.30 5.59 9.06 -39.29 -0.36 5.24 15 29 H 0.29 8.36 6.40 -40.82 -0.26 8.10 15 LS Contribution 271.95 15.07 4.10 4.10 Total: -1.00 -29.35 271.95 -5.80 -35.15 By element: Atomic # 1 Polarization: 10.12 SS G_CDS: -2.40 Total: 7.73 kcal Atomic # 6 Polarization: -11.79 SS G_CDS: -1.49 Total: -13.29 kcal Atomic # 7 Polarization: -43.73 SS G_CDS: 0.70 Total: -43.03 kcal Atomic # 8 Polarization: -6.04 SS G_CDS: -0.18 Total: -6.22 kcal Atomic # 9 Polarization: -2.16 SS G_CDS: 0.04 Total: -2.12 kcal Atomic # 14 Polarization: 25.12 SS G_CDS: -5.08 Total: 20.04 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.48 Total: -2.36 kcal Total LS contribution 4.10 Total: 4.10 kcal Total: -29.35 -5.80 -35.15 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260033516.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.036 kcal (2) G-P(sol) polarization free energy of solvation -29.354 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.389 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.795 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.149 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.185 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds