Wall clock time and date at job start Mon Mar 30 2020 06:56:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35974 * 117.00197 * 2 1 4 4 C 1.38834 * 120.03303 * 89.99797 * 3 2 1 5 5 Cl 1.73597 * 120.02483 * 0.04907 * 4 3 2 6 6 C 1.38223 * 119.94592 * 180.02562 * 4 3 2 7 7 C 1.38470 * 120.01973 * 359.97438 * 6 4 3 8 8 F 1.35098 * 119.96799 * 180.02562 * 7 6 4 9 9 C 1.38425 * 120.06981 * 359.97438 * 7 6 4 10 10 C 1.38203 * 120.05036 * 0.02562 * 9 7 6 11 11 C 1.50698 * 120.00741 * 179.97438 * 10 9 7 12 12 H 1.09009 * 109.47011 * 219.99962 * 11 10 9 13 13 N 1.46903 * 109.47434 * 339.99581 * 11 10 9 14 14 C 1.50694 * 109.47289 * 100.00486 * 11 10 9 15 15 H 1.07994 * 120.00379 * 359.97438 * 14 11 10 16 16 C 1.37881 * 120.00109 * 180.02562 * 14 11 10 17 17 N 1.31512 * 119.99836 * 359.97438 * 16 14 11 18 18 Si 1.86801 * 120.00149 * 179.97438 * 16 14 11 19 19 H 1.48499 * 109.47113 * 89.99383 * 18 16 14 20 20 H 1.48499 * 109.46793 * 209.99746 * 18 16 14 21 21 H 1.48498 * 109.46847 * 329.99085 * 18 16 14 22 22 H 1.09011 * 109.47133 * 59.99839 * 1 2 3 23 23 H 1.09001 * 109.47052 * 179.97438 * 1 2 3 24 24 H 1.09001 * 109.46989 * 300.00066 * 1 2 3 25 25 H 1.08000 * 119.98849 * 179.97438 * 6 4 3 26 26 H 1.08002 * 119.97417 * 179.75103 * 9 7 6 27 27 H 1.00902 * 110.99713 * 296.05250 * 13 11 10 28 28 H 1.00893 * 110.99456 * 60.00514 * 13 11 10 29 29 H 0.97008 * 120.00146 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 2.3618 1.8306 1.2019 5 17 1.9695 1.0581 2.7062 6 6 2.9888 3.0624 1.1998 7 6 3.3026 3.6780 -0.0002 8 9 3.9159 4.8817 -0.0010 9 6 2.9894 3.0609 -1.1990 10 6 2.3624 1.8293 -1.2003 11 6 2.0213 1.1586 -2.5059 12 1 1.0408 0.6887 -2.4278 13 7 1.9999 2.1603 -3.5802 14 6 3.0574 0.1097 -2.8176 15 1 3.8808 -0.0546 -2.1384 16 6 2.9548 -0.6397 -3.9704 17 7 1.9524 -0.4393 -4.7978 18 14 4.2396 -1.9394 -4.3571 19 1 3.8214 -3.2384 -3.7715 20 1 4.3735 -2.0803 -5.8293 21 1 5.5450 -1.5326 -3.7780 22 1 -0.3634 0.5139 -0.8901 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5139 0.8900 25 1 3.2342 3.5449 2.1344 26 1 3.2311 3.5443 -2.1340 27 1 1.2693 2.8392 -3.4270 28 1 2.8982 2.6104 -3.6727 29 1 1.8799 -0.9667 -5.6088 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260033535.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:56:23 Heat of formation + Delta-G solvation = -57.104614 kcal Electronic energy + Delta-G solvation = -17388.506470 eV Core-core repulsion = 14252.679308 eV Total energy + Delta-G solvation = -3135.827162 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -48.73856 -39.74987 -36.82766 -36.43236 -34.57573 -31.77842 -29.57974 -29.42837 -26.58002 -26.01776 -23.49562 -21.99559 -20.46297 -17.57188 -17.01024 -16.86198 -16.49240 -15.50349 -15.00279 -14.73879 -14.52972 -14.16691 -14.13803 -13.55241 -13.25250 -12.96108 -12.66900 -12.26276 -11.51878 -11.39860 -11.31489 -10.96315 -10.87115 -10.73158 -10.62798 -9.92316 -9.53359 -9.39823 -8.51343 -8.40443 -8.07457 -7.29876 -5.92292 -4.06020 1.17257 1.37482 2.20051 3.34339 3.40590 3.43686 3.56908 4.16045 4.46788 4.49273 4.94957 5.19667 5.31586 5.44453 5.60598 5.63140 5.74420 5.93056 6.00842 6.06521 6.18936 6.44858 6.58872 6.88197 7.28128 7.85241 7.87903 8.08258 8.48590 8.84706 9.04756 9.61769 11.12322 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.019932 B = 0.007903 C = 0.006648 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1404.419606 B = 3541.954889 C = 4210.976740 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.307 6.307 3 C 0.100 3.900 4 C -0.030 4.030 5 Cl -0.062 7.062 6 C -0.164 4.164 7 C 0.104 3.896 8 F -0.140 7.140 9 C -0.152 4.152 10 C -0.051 4.051 11 C 0.261 3.739 12 H 0.059 0.941 13 N -0.810 5.810 14 C -0.521 4.521 15 H 0.055 0.945 16 C 0.085 3.915 17 N -0.848 5.848 18 Si 0.887 3.113 19 H -0.280 1.280 20 H -0.287 1.287 21 H -0.275 1.275 22 H 0.050 0.950 23 H 0.093 0.907 24 H 0.038 0.962 25 H 0.140 0.860 26 H 0.140 0.860 27 H 0.300 0.700 28 H 0.320 0.680 29 H 0.256 0.744 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.029 5.729 10.414 12.058 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 O -0.223 6.223 3 C 0.055 3.945 4 C -0.057 4.057 5 Cl -0.033 7.033 6 C -0.183 4.183 7 C 0.084 3.916 8 F -0.118 7.118 9 C -0.171 4.171 10 C -0.055 4.055 11 C 0.151 3.849 12 H 0.077 0.923 13 N -0.337 5.337 14 C -0.560 4.560 15 H 0.073 0.927 16 C -0.121 4.121 17 N -0.483 5.483 18 Si 0.715 3.285 19 H -0.206 1.206 20 H -0.213 1.213 21 H -0.200 1.200 22 H 0.068 0.932 23 H 0.112 0.888 24 H 0.056 0.944 25 H 0.158 0.842 26 H 0.158 0.842 27 H 0.111 0.889 28 H 0.134 0.866 29 H 0.066 0.934 Dipole moment (debyes) X Y Z Total from point charges -2.226 4.852 9.851 11.204 hybrid contribution 0.954 0.325 0.759 1.262 sum -1.272 5.176 10.610 11.874 Atomic orbital electron populations 1.22939 0.79389 1.03244 1.00070 1.86159 1.19256 1.22975 1.93888 1.18286 0.99102 0.87389 0.89748 1.21103 1.03580 0.94138 0.86916 1.98341 1.92722 1.81009 1.31256 1.20594 1.04527 0.95311 0.97901 1.17416 0.98015 0.82220 0.93944 1.91477 1.80600 1.42355 1.97402 1.21052 1.02157 0.96709 0.97190 1.22160 0.92373 0.91713 0.99239 1.18229 0.98645 0.89506 0.78490 0.92338 1.59169 1.06831 1.18076 1.49597 1.20657 1.10223 1.18121 1.07011 0.92714 1.24891 0.95233 0.96156 0.95858 1.70091 1.29181 1.38119 1.10872 0.86696 0.82271 0.82254 0.77285 1.20629 1.21286 1.19984 0.93173 0.88846 0.94358 0.84204 0.84192 0.88940 0.86635 0.93375 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.59 10.84 101.05 1.10 1.69 15 2 O -0.31 -6.02 9.20 -19.66 -0.18 -6.20 15 3 C 0.10 1.92 5.68 -39.21 -0.22 1.70 15 4 C -0.03 -0.50 6.33 -39.37 -0.25 -0.75 15 5 Cl -0.06 -0.92 28.50 -51.86 -1.48 -2.39 15 6 C -0.16 -2.52 9.80 -39.50 -0.39 -2.91 15 7 C 0.10 1.69 7.30 -39.43 -0.29 1.40 15 8 F -0.14 -2.18 17.27 2.25 0.04 -2.14 15 9 C -0.15 -2.69 9.22 -39.53 -0.36 -3.06 15 10 C -0.05 -1.03 5.03 -104.49 -0.53 -1.55 15 11 C 0.26 6.08 2.51 -70.02 -0.18 5.91 15 12 H 0.06 1.49 6.56 -51.92 -0.34 1.15 15 13 N -0.81 -17.70 8.01 -6.65 -0.05 -17.76 15 14 C -0.52 -13.90 8.71 -34.44 -0.30 -14.20 15 15 H 0.05 1.50 7.74 -52.49 -0.41 1.10 15 16 C 0.09 2.32 5.39 -17.82 -0.10 2.23 15 17 N -0.85 -23.85 12.77 55.43 0.71 -23.14 15 18 Si 0.89 21.18 29.54 -169.99 -5.02 16.16 15 19 H -0.28 -6.67 7.11 56.52 0.40 -6.27 15 20 H -0.29 -6.81 7.11 56.52 0.40 -6.41 15 21 H -0.27 -6.55 7.11 56.52 0.40 -6.15 15 22 H 0.05 0.80 7.12 -51.92 -0.37 0.43 15 23 H 0.09 1.28 8.14 -51.93 -0.42 0.86 15 24 H 0.04 0.52 8.14 -51.93 -0.42 0.10 15 25 H 0.14 1.80 8.06 -52.49 -0.42 1.38 15 26 H 0.14 2.33 6.25 -52.49 -0.33 2.00 15 27 H 0.30 5.73 9.06 -39.29 -0.36 5.38 15 28 H 0.32 6.65 7.28 -39.30 -0.29 6.36 15 29 H 0.26 6.94 8.31 -40.82 -0.34 6.60 15 LS Contribution 274.07 15.07 4.13 4.13 Total: -1.00 -28.49 274.07 -5.86 -34.34 By element: Atomic # 1 Polarization: 9.03 SS G_CDS: -2.49 Total: 6.54 kcal Atomic # 6 Polarization: -8.03 SS G_CDS: -1.51 Total: -9.55 kcal Atomic # 7 Polarization: -41.55 SS G_CDS: 0.65 Total: -40.90 kcal Atomic # 8 Polarization: -6.02 SS G_CDS: -0.18 Total: -6.20 kcal Atomic # 9 Polarization: -2.18 SS G_CDS: 0.04 Total: -2.14 kcal Atomic # 14 Polarization: 21.18 SS G_CDS: -5.02 Total: 16.16 kcal Atomic # 17 Polarization: -0.92 SS G_CDS: -1.48 Total: -2.39 kcal Total LS contribution 4.13 Total: 4.13 kcal Total: -28.49 -5.86 -34.34 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260033535.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.760 kcal (2) G-P(sol) polarization free energy of solvation -28.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.858 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.345 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.105 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds