Wall clock time and date at job start Mon Mar 30 2020 06:54:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35953 * 116.99735 * 2 1 4 4 C 1.38945 * 120.06041 * 270.23193 * 3 2 1 5 5 F 1.35102 * 120.03506 * 0.02562 * 4 3 2 6 6 C 1.38295 * 119.92966 * 180.27488 * 4 3 2 7 7 C 1.38287 * 120.04554 * 359.77294 * 6 4 3 8 8 C 1.38333 * 120.10985 * 359.97224 * 7 6 4 9 9 Cl 1.73597 * 119.96418 * 179.97438 * 8 7 6 10 10 C 1.38328 * 120.06832 * 0.02562 * 8 7 6 11 11 C 1.50706 * 120.02012 * 179.97438 * 10 8 7 12 12 H 1.09003 * 109.46792 * 343.97222 * 11 10 8 13 13 N 1.46900 * 109.46936 * 223.97607 * 11 10 8 14 14 C 1.50697 * 109.47204 * 103.97711 * 11 10 8 15 15 H 1.08000 * 120.00035 * 359.97438 * 14 11 10 16 16 C 1.37875 * 120.00057 * 180.02562 * 14 11 10 17 17 N 1.31515 * 119.99862 * 359.97438 * 16 14 11 18 18 Si 1.86805 * 119.99842 * 179.97438 * 16 14 11 19 19 H 1.48504 * 109.46614 * 179.97438 * 18 16 14 20 20 H 1.48495 * 109.46920 * 299.99595 * 18 16 14 21 21 H 1.48499 * 109.47307 * 59.99961 * 18 16 14 22 22 H 1.09000 * 109.47689 * 59.99568 * 1 2 3 23 23 H 1.09007 * 109.47161 * 179.97438 * 1 2 3 24 24 H 1.08997 * 109.47307 * 299.99083 * 1 2 3 25 25 H 1.08001 * 119.97310 * 179.74962 * 6 4 3 26 26 H 1.07998 * 119.94410 * 179.97438 * 7 6 4 27 27 H 1.00900 * 111.00069 * 291.61687 * 13 11 10 28 28 H 1.00898 * 111.00336 * 55.57752 * 13 11 10 29 29 H 0.96995 * 120.00120 * 359.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2114 0.0000 4 6 2.3577 1.8337 -1.2026 5 9 2.0473 1.2360 -2.3737 6 6 2.9906 3.0634 -1.1994 7 6 3.3089 3.6752 -0.0008 8 6 2.9948 3.0596 1.1975 9 17 3.3967 3.8308 2.6999 10 6 2.3617 1.8297 1.1998 11 6 2.0204 1.1598 2.5059 12 1 2.5834 1.6290 3.3128 13 7 2.3682 -0.2655 2.4306 14 6 0.5444 1.3032 2.7735 15 1 -0.0838 1.8275 2.0685 16 6 -0.0040 0.7661 3.9188 17 7 0.7610 0.1282 4.7775 18 14 -1.8337 0.9446 4.2507 19 1 -2.1698 0.2843 5.5377 20 1 -2.1847 2.3855 4.3265 21 1 -2.6009 0.3053 3.1517 22 1 -0.3634 0.5139 -0.8899 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3634 0.5137 0.8900 25 1 3.2368 3.5459 -2.1338 26 1 3.8036 4.6353 -0.0003 27 1 1.7640 -0.7515 1.7850 28 1 3.3380 -0.3884 2.1808 29 1 1.7109 0.0352 4.6049 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260079915.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:54:15 Heat of formation + Delta-G solvation = -61.862555 kcal Electronic energy + Delta-G solvation = -17871.148372 eV Core-core repulsion = 14735.114890 eV Total energy + Delta-G solvation = -3136.033482 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.69744 -39.74745 -37.19492 -35.82568 -34.80536 -31.54773 -29.64150 -29.51571 -26.73425 -25.29534 -23.18856 -22.15632 -20.75283 -17.71252 -17.29502 -16.95793 -16.16880 -15.76187 -15.12638 -14.64641 -14.39797 -14.07136 -13.77083 -13.60563 -13.24731 -12.84362 -12.43616 -12.15523 -12.06496 -11.45814 -11.05396 -10.84175 -10.77493 -10.70786 -10.16221 -10.04027 -9.48611 -8.98297 -8.39289 -8.30784 -8.12420 -7.41944 -6.24078 -4.08187 1.14073 1.35717 2.49955 3.40511 3.43163 3.50705 3.61328 4.15670 4.41113 4.53254 4.88353 5.15726 5.40737 5.42640 5.63883 5.76023 5.96961 6.00289 6.11750 6.20427 6.35968 6.43464 6.52204 6.73893 7.24033 7.80456 7.89107 8.23081 8.64149 8.85902 8.99675 9.73901 11.15539 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.019179 B = 0.010019 C = 0.007683 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1459.611039 B = 2793.914020 C = 3643.525925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.322 6.322 3 C 0.076 3.924 4 C 0.077 3.923 5 F -0.136 7.136 6 C -0.157 4.157 7 C -0.093 4.093 8 C -0.039 4.039 9 Cl -0.055 7.055 10 C -0.055 4.055 11 C 0.237 3.763 12 H 0.057 0.943 13 N -0.828 5.828 14 C -0.608 4.608 15 H 0.047 0.953 16 C 0.042 3.958 17 N -0.883 5.883 18 Si 1.057 2.943 19 H -0.282 1.282 20 H -0.289 1.289 21 H -0.289 1.289 22 H 0.030 0.970 23 H 0.088 0.912 24 H 0.095 0.905 25 H 0.140 0.860 26 H 0.138 0.862 27 H 0.342 0.658 28 H 0.299 0.701 29 H 0.294 0.706 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.200 5.190 -9.636 11.402 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.238 6.238 3 C 0.030 3.970 4 C 0.057 3.943 5 F -0.115 7.115 6 C -0.176 4.176 7 C -0.112 4.112 8 C -0.067 4.067 9 Cl -0.026 7.026 10 C -0.059 4.059 11 C 0.127 3.873 12 H 0.075 0.925 13 N -0.360 5.360 14 C -0.647 4.647 15 H 0.065 0.935 16 C -0.169 4.169 17 N -0.517 5.517 18 Si 0.886 3.114 19 H -0.207 1.207 20 H -0.216 1.216 21 H -0.216 1.216 22 H 0.048 0.952 23 H 0.107 0.893 24 H 0.113 0.887 25 H 0.158 0.842 26 H 0.155 0.845 27 H 0.160 0.840 28 H 0.109 0.891 29 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 1.913 4.605 -7.659 9.140 hybrid contribution 1.223 0.830 -2.461 2.871 sum 3.136 5.436 -10.120 11.908 Atomic orbital electron populations 1.23469 0.77954 1.03541 1.02619 1.85892 1.21067 1.23147 1.93660 1.18320 1.00308 0.88467 0.89866 1.18216 1.02284 0.92890 0.80918 1.91459 1.91161 1.83367 1.45519 1.20759 1.03148 0.94597 0.99103 1.20831 1.00184 1.00209 0.89935 1.20721 1.03378 0.95084 0.87471 1.98351 1.92177 1.79907 1.32207 1.21860 0.92181 0.92439 0.99397 1.18553 0.98110 0.84774 0.85856 0.92495 1.59547 1.05426 1.12580 1.58410 1.21516 0.90881 1.42415 1.09858 0.93501 1.25539 1.05756 0.93214 0.92359 1.70522 1.09595 1.35353 1.36185 0.83738 0.74963 0.76231 0.76454 1.20699 1.21561 1.21552 0.95172 0.89323 0.88674 0.84242 0.84453 0.84016 0.89070 0.89343 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.32 10.60 101.05 1.07 1.39 15 2 O -0.32 -6.42 7.31 -19.59 -0.14 -6.57 15 3 C 0.08 1.49 5.52 -39.18 -0.22 1.28 15 4 C 0.08 1.34 7.31 -39.30 -0.29 1.05 15 5 F -0.14 -2.35 17.11 2.25 0.04 -2.31 15 6 C -0.16 -2.30 10.02 -39.54 -0.40 -2.69 15 7 C -0.09 -1.39 9.82 -39.53 -0.39 -1.77 15 8 C -0.04 -0.71 6.31 -39.51 -0.25 -0.96 15 9 Cl -0.06 -0.99 27.08 -51.86 -1.40 -2.40 15 10 C -0.05 -1.14 4.82 -104.45 -0.50 -1.64 15 11 C 0.24 5.60 2.17 -70.01 -0.15 5.45 15 12 H 0.06 1.45 6.26 -51.93 -0.33 1.13 15 13 N -0.83 -19.17 7.57 -6.65 -0.05 -19.22 15 14 C -0.61 -15.69 6.49 -34.44 -0.22 -15.92 15 15 H 0.05 1.22 6.50 -52.49 -0.34 0.88 15 16 C 0.04 1.15 5.39 -17.82 -0.10 1.05 15 17 N -0.88 -25.64 13.51 55.43 0.75 -24.90 15 18 Si 1.06 24.04 29.90 -169.99 -5.08 18.96 15 19 H -0.28 -6.53 7.11 56.52 0.40 -6.12 15 20 H -0.29 -6.37 7.11 56.52 0.40 -5.97 15 21 H -0.29 -6.21 7.11 56.52 0.40 -5.81 15 22 H 0.03 0.50 8.14 -51.93 -0.42 0.07 15 23 H 0.09 1.42 8.14 -51.93 -0.42 1.00 15 24 H 0.10 1.99 4.57 -51.93 -0.24 1.75 15 25 H 0.14 1.58 8.06 -52.49 -0.42 1.16 15 26 H 0.14 1.62 8.06 -52.49 -0.42 1.20 15 27 H 0.34 7.92 5.95 -39.29 -0.23 7.69 15 28 H 0.30 6.35 8.98 -39.29 -0.35 6.00 15 29 H 0.29 8.61 6.39 -40.82 -0.26 8.35 15 LS Contribution 263.32 15.07 3.97 3.97 Total: -1.00 -28.30 263.32 -5.61 -33.90 By element: Atomic # 1 Polarization: 13.56 SS G_CDS: -2.24 Total: 11.32 kcal Atomic # 6 Polarization: -11.32 SS G_CDS: -1.44 Total: -12.76 kcal Atomic # 7 Polarization: -44.82 SS G_CDS: 0.70 Total: -44.12 kcal Atomic # 8 Polarization: -6.42 SS G_CDS: -0.14 Total: -6.57 kcal Atomic # 9 Polarization: -2.35 SS G_CDS: 0.04 Total: -2.31 kcal Atomic # 14 Polarization: 24.04 SS G_CDS: -5.08 Total: 18.96 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -1.40 Total: -2.40 kcal Total LS contribution 3.97 Total: 3.97 kcal Total: -28.30 -5.61 -33.90 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260079915.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.960 kcal (2) G-P(sol) polarization free energy of solvation -28.297 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.257 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.605 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.902 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.863 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds