Wall clock time and date at job start Mon Mar 30 2020 06:57:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35956 * 117.00090 * 2 1 4 4 C 1.38917 * 120.05668 * 269.98297 * 3 2 1 5 5 F 1.35097 * 120.04963 * 0.03189 * 4 3 2 6 6 C 1.38392 * 119.89352 * 180.02562 * 4 3 2 7 7 Cl 1.73601 * 119.99474 * 179.97438 * 6 4 3 8 8 C 1.38399 * 120.01091 * 359.96915 * 6 4 3 9 9 C 1.38217 * 120.11363 * 359.79538 * 8 6 4 10 10 C 1.38229 * 120.09761 * 0.46094 * 9 8 6 11 11 C 1.50693 * 119.99699 * 179.79114 * 10 9 8 12 12 H 1.09004 * 109.47118 * 219.72271 * 11 10 9 13 13 N 1.46897 * 109.47821 * 339.72380 * 11 10 9 14 14 C 1.50706 * 109.47314 * 99.72826 * 11 10 9 15 15 H 1.08002 * 119.99604 * 335.24831 * 14 11 10 16 16 C 1.37879 * 120.00014 * 155.25057 * 14 11 10 17 17 N 1.31507 * 120.00312 * 6.88977 * 16 14 11 18 18 Si 1.86802 * 119.99475 * 186.89131 * 16 14 11 19 19 H 1.48498 * 109.46756 * 180.02562 * 18 16 14 20 20 H 1.48498 * 109.47026 * 299.99795 * 18 16 14 21 21 H 1.48500 * 109.47347 * 59.99860 * 18 16 14 22 22 H 1.08998 * 109.47317 * 299.99914 * 1 2 3 23 23 H 1.08995 * 109.47091 * 60.00527 * 1 2 3 24 24 H 1.09001 * 109.46620 * 179.97438 * 1 2 3 25 25 H 1.08000 * 119.94695 * 180.02562 * 8 6 4 26 26 H 1.07997 * 119.94915 * 180.25326 * 9 8 6 27 27 H 1.00905 * 110.99840 * 66.71382 * 13 11 10 28 28 H 1.00899 * 111.00679 * 190.66850 * 13 11 10 29 29 H 0.97009 * 119.99907 * 355.33346 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 2.3624 1.8311 -1.2024 5 9 2.0565 1.2314 -2.3736 6 6 2.9912 3.0640 -1.1984 7 17 3.3882 3.8405 -2.6995 8 6 3.3035 3.6779 0.0020 9 6 2.9847 3.0638 1.1985 10 6 2.3614 1.8300 1.2000 11 6 2.0191 1.1604 2.5058 12 1 2.2149 0.0910 2.4281 13 7 2.8422 1.7320 3.5799 14 6 0.5615 1.3828 2.8175 15 1 0.0447 2.2358 2.4030 16 6 -0.1122 0.4974 3.6319 17 7 0.5449 -0.4626 4.2451 18 14 -1.9585 0.6614 3.8639 19 1 -2.4387 -0.4039 4.7803 20 1 -2.2679 1.9917 4.4469 21 1 -2.6365 0.5272 2.5495 22 1 -0.3634 0.5138 0.8900 23 1 -0.3633 0.5137 -0.8900 24 1 -0.3632 -1.0277 -0.0005 25 1 3.7938 4.6402 0.0038 26 1 3.2260 3.5472 2.1337 27 1 2.6007 2.6976 3.7457 28 1 2.7608 1.1885 4.4261 29 1 1.4909 -0.5899 4.0723 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260163355.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:57:54 Heat of formation + Delta-G solvation = -69.569652 kcal Electronic energy + Delta-G solvation = -17601.272539 eV Core-core repulsion = 14464.904852 eV Total energy + Delta-G solvation = -3136.367687 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -48.58949 -39.53537 -37.14198 -36.21547 -34.96572 -31.74518 -29.82404 -29.30626 -26.61327 -25.48961 -23.35092 -22.13297 -20.60743 -17.75736 -17.24729 -16.79832 -16.44547 -15.70914 -15.11648 -14.88246 -14.43507 -13.99811 -13.91461 -13.25963 -12.90697 -12.79719 -12.59479 -12.53950 -11.88670 -11.66057 -11.33506 -10.98159 -10.85881 -10.70417 -10.34420 -9.97607 -9.61103 -9.39272 -8.83866 -8.33250 -8.19100 -7.49060 -6.61699 -4.41926 1.34101 1.37902 2.19493 3.24317 3.26860 3.45258 3.67112 4.22651 4.28542 4.52331 5.02746 5.12147 5.25983 5.52149 5.78877 5.85579 5.97683 6.05856 6.18241 6.19584 6.52773 6.55248 6.64995 6.94436 7.17435 7.68373 7.95544 8.03713 8.28288 8.47635 8.56195 9.29379 10.70693 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.028573 B = 0.007105 C = 0.006392 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 979.722627 B = 3939.759919 C = 4379.229127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.321 6.321 3 C 0.075 3.925 4 C 0.082 3.918 5 F -0.129 7.129 6 C -0.086 4.086 7 Cl -0.069 7.069 8 C -0.094 4.094 9 C -0.102 4.102 10 C -0.009 4.009 11 C 0.224 3.776 12 H 0.065 0.935 13 N -0.854 5.854 14 C -0.625 4.625 15 H 0.051 0.949 16 C 0.034 3.966 17 N -0.894 5.894 18 Si 1.060 2.940 19 H -0.280 1.280 20 H -0.286 1.286 21 H -0.284 1.284 22 H 0.087 0.913 23 H 0.030 0.970 24 H 0.086 0.914 25 H 0.136 0.864 26 H 0.143 0.857 27 H 0.323 0.677 28 H 0.336 0.664 29 H 0.273 0.727 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.246 6.220 -7.301 9.851 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.237 6.237 3 C 0.030 3.970 4 C 0.062 3.938 5 F -0.108 7.108 6 C -0.114 4.114 7 Cl -0.040 7.040 8 C -0.113 4.113 9 C -0.121 4.121 10 C -0.011 4.011 11 C 0.115 3.885 12 H 0.083 0.917 13 N -0.382 5.382 14 C -0.664 4.664 15 H 0.069 0.931 16 C -0.173 4.173 17 N -0.529 5.529 18 Si 0.888 3.112 19 H -0.205 1.205 20 H -0.212 1.212 21 H -0.211 1.211 22 H 0.106 0.894 23 H 0.049 0.951 24 H 0.104 0.896 25 H 0.154 0.846 26 H 0.160 0.840 27 H 0.134 0.866 28 H 0.148 0.852 29 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 1.689 5.264 -7.146 9.035 hybrid contribution 0.154 0.917 -0.853 1.262 sum 1.843 6.181 -8.000 10.276 Atomic orbital electron populations 1.23268 0.78230 1.03172 1.02113 1.85961 1.20699 1.23014 1.94017 1.18334 1.00522 0.88350 0.89828 1.17790 1.02920 0.91507 0.81599 1.91468 1.91153 1.82980 1.45177 1.20629 1.07841 0.94481 0.88404 1.98336 1.92890 1.80336 1.32432 1.20919 1.00170 1.00241 0.89923 1.20964 0.98588 0.95001 0.97539 1.20752 0.91420 0.93052 0.95868 1.18102 0.91486 0.94909 0.84010 0.91685 1.59528 1.60402 1.06457 1.11785 1.22361 0.95492 1.13115 1.35447 0.93084 1.25836 1.06233 0.92898 0.92363 1.70829 1.12055 1.32436 1.37578 0.83665 0.74337 0.76433 0.76794 1.20481 1.21244 1.21074 0.89446 0.95121 0.89571 0.84578 0.83956 0.86603 0.85236 0.91481 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.50 11.02 101.05 1.11 1.62 15 2 O -0.32 -6.96 9.51 -19.60 -0.19 -7.15 15 3 C 0.08 1.57 5.69 -39.18 -0.22 1.35 15 4 C 0.08 1.57 7.28 -39.27 -0.29 1.29 15 5 F -0.13 -2.46 16.68 2.25 0.04 -2.43 15 6 C -0.09 -1.45 6.32 -39.47 -0.25 -1.70 15 7 Cl -0.07 -1.01 28.61 -51.86 -1.48 -2.49 15 8 C -0.09 -1.46 9.83 -39.53 -0.39 -1.85 15 9 C -0.10 -1.79 9.27 -39.59 -0.37 -2.16 15 10 C -0.01 -0.19 5.08 -104.48 -0.53 -0.72 15 11 C 0.22 5.09 2.22 -70.02 -0.16 4.93 15 12 H 0.07 1.68 6.73 -51.93 -0.35 1.33 15 13 N -0.85 -17.47 8.53 -6.65 -0.06 -17.53 15 14 C -0.62 -15.14 6.01 -34.44 -0.21 -15.35 15 15 H 0.05 1.27 7.81 -52.49 -0.41 0.86 15 16 C 0.03 0.87 5.35 -17.82 -0.10 0.77 15 17 N -0.89 -24.02 13.63 55.43 0.76 -23.26 15 18 Si 1.06 22.66 29.91 -169.99 -5.08 17.58 15 19 H -0.28 -6.11 7.11 56.52 0.40 -5.71 15 20 H -0.29 -5.93 7.11 56.52 0.40 -5.53 15 21 H -0.28 -5.77 7.11 56.52 0.40 -5.37 15 22 H 0.09 1.88 5.42 -51.93 -0.28 1.59 15 23 H 0.03 0.53 8.14 -51.93 -0.42 0.11 15 24 H 0.09 1.50 8.14 -51.93 -0.42 1.08 15 25 H 0.14 1.69 8.06 -52.49 -0.42 1.26 15 26 H 0.14 2.28 6.42 -52.49 -0.34 1.94 15 27 H 0.32 6.17 7.62 -39.29 -0.30 5.87 15 28 H 0.34 7.15 8.48 -39.29 -0.33 6.82 15 29 H 0.27 7.35 6.24 -40.82 -0.25 7.09 15 LS Contribution 269.33 15.07 4.06 4.06 Total: -1.00 -26.01 269.33 -5.68 -31.69 By element: Atomic # 1 Polarization: 13.68 SS G_CDS: -2.33 Total: 11.35 kcal Atomic # 6 Polarization: -10.43 SS G_CDS: -1.39 Total: -11.82 kcal Atomic # 7 Polarization: -41.49 SS G_CDS: 0.70 Total: -40.79 kcal Atomic # 8 Polarization: -6.96 SS G_CDS: -0.19 Total: -7.15 kcal Atomic # 9 Polarization: -2.46 SS G_CDS: 0.04 Total: -2.43 kcal Atomic # 14 Polarization: 22.66 SS G_CDS: -5.08 Total: 17.58 kcal Atomic # 17 Polarization: -1.01 SS G_CDS: -1.48 Total: -2.49 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -26.01 -5.68 -31.69 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260163355.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.879 kcal (2) G-P(sol) polarization free energy of solvation -26.013 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.893 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.677 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.690 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.570 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds