Wall clock time and date at job start Mon Mar 30 2020 06:37:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38464 * 119.97507 * 2 1 4 4 F 1.35102 * 119.96570 * 359.97438 * 3 2 1 5 5 C 1.38434 * 120.06803 * 180.02562 * 3 2 1 6 6 C 1.38262 * 120.01775 * 0.02562 * 5 3 2 7 7 Cl 1.73601 * 120.02334 * 179.97438 * 6 5 3 8 8 C 1.38795 * 119.94557 * 359.68690 * 6 5 3 9 9 O 1.35967 * 120.03181 * 180.29767 * 8 6 5 10 10 C 1.38159 * 119.97489 * 179.97438 * 2 1 3 11 11 C 1.50708 * 120.00613 * 0.02562 * 10 2 1 12 12 H 1.08995 * 109.46906 * 344.99750 * 11 10 2 13 13 N 1.46900 * 109.46755 * 224.99957 * 11 10 2 14 14 C 1.50698 * 109.47084 * 105.00019 * 11 10 2 15 15 H 1.08000 * 120.00172 * 5.58189 * 14 11 10 16 16 C 1.37878 * 119.99917 * 185.58223 * 14 11 10 17 17 N 1.31506 * 120.00233 * 196.17345 * 16 14 11 18 18 Si 1.86805 * 119.99898 * 15.89744 * 16 14 11 19 19 H 1.48500 * 109.47074 * 180.27741 * 18 16 14 20 20 H 1.48501 * 109.47038 * 300.27521 * 18 16 14 21 21 H 1.48496 * 109.46999 * 60.27391 * 18 16 14 22 22 H 1.08997 * 109.46688 * 270.01741 * 1 2 3 23 23 H 1.08998 * 109.46902 * 30.01587 * 1 2 3 24 24 H 1.09001 * 109.46899 * 150.01719 * 1 2 3 25 25 H 1.07999 * 119.99213 * 179.97438 * 5 3 2 26 26 H 0.96701 * 114.00006 * 270.30988 * 9 8 6 27 27 H 1.00899 * 110.99755 * 171.51826 * 13 11 10 28 28 H 1.00895 * 111.00003 * 295.47083 * 13 11 10 29 29 H 0.97008 * 120.00072 * 354.66418 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1989 1.1994 0.0000 4 9 1.5221 2.3688 -0.0005 5 6 3.5832 1.2017 -0.0005 6 6 4.2768 0.0056 -0.0016 7 17 6.0128 0.0083 -0.0030 8 6 3.5840 -1.1970 0.0044 9 8 4.2644 -2.3742 0.0095 10 6 2.1973 -1.1968 0.0005 11 6 1.4434 -2.5017 0.0005 12 1 0.4021 -2.3196 0.2661 13 7 2.0460 -3.4154 0.9803 14 6 1.5110 -3.1209 -1.3717 15 1 2.1200 -2.6671 -2.1395 16 6 0.7953 -4.2668 -1.6469 17 7 1.0856 -4.9839 -2.7104 18 14 -0.5816 -4.8050 -0.5050 19 1 -1.1854 -6.0620 -1.0156 20 1 -0.0342 -5.0360 0.8559 21 1 -1.6198 -3.7448 -0.4475 22 1 -0.3632 0.0003 1.0277 23 1 -0.3633 0.8898 -0.5141 24 1 -0.3633 -0.8902 -0.5136 25 1 4.1215 2.1379 -0.0010 26 1 4.4648 -2.7165 -0.8724 27 1 1.4798 -4.2418 1.1000 28 1 2.9890 -3.6582 0.7159 29 1 1.7498 -4.6671 -3.3425 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260386152.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:37:15 Heat of formation + Delta-G solvation = -74.713644 kcal Electronic energy + Delta-G solvation = -17577.822507 eV Core-core repulsion = 14441.231761 eV Total energy + Delta-G solvation = -3136.590747 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -48.69954 -39.72964 -36.46575 -36.30664 -34.77151 -32.32706 -31.44137 -29.00676 -26.59788 -25.87264 -23.14690 -21.45377 -20.15336 -18.07501 -17.61838 -17.09511 -16.70865 -15.57236 -15.08618 -14.86346 -14.15681 -13.84270 -13.50989 -13.46810 -12.94734 -12.81810 -12.50056 -12.43945 -11.93609 -11.91248 -11.56636 -10.94779 -10.89251 -10.74975 -10.56238 -10.20094 -9.71598 -9.39306 -8.62209 -8.37489 -8.06374 -7.54248 -6.61770 -4.38542 1.23702 1.41911 2.24412 3.20067 3.27348 3.43678 3.64872 4.25248 4.45342 4.52774 4.94985 5.03498 5.11726 5.43310 5.71566 5.76833 5.94801 6.00297 6.05760 6.23908 6.41198 6.45379 6.54329 6.92545 7.12002 7.65060 8.03275 8.07768 8.37373 8.53836 8.77976 9.33297 10.67994 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.021858 B = 0.008452 C = 0.006720 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1280.695296 B = 3312.056723 C = 4165.889538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.105 4.105 3 C 0.094 3.906 4 F -0.138 7.138 5 C -0.155 4.155 6 C -0.046 4.046 7 Cl -0.063 7.063 8 C 0.127 3.873 9 O -0.472 6.472 10 C -0.006 4.006 11 C 0.216 3.784 12 H 0.050 0.950 13 N -0.858 5.858 14 C -0.630 4.630 15 H 0.055 0.945 16 C 0.036 3.964 17 N -0.893 5.893 18 Si 1.044 2.956 19 H -0.283 1.283 20 H -0.272 1.272 21 H -0.280 1.280 22 H 0.072 0.928 23 H 0.066 0.934 24 H 0.088 0.912 25 H 0.140 0.860 26 H 0.391 0.609 27 H 0.326 0.674 28 H 0.344 0.656 29 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.220 8.979 4.706 10.637 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.107 4.107 3 C 0.075 3.925 4 F -0.117 7.117 5 C -0.174 4.174 6 C -0.073 4.073 7 Cl -0.034 7.034 8 C 0.080 3.920 9 O -0.281 6.281 10 C -0.008 4.008 11 C 0.106 3.894 12 H 0.068 0.932 13 N -0.396 5.396 14 C -0.669 4.669 15 H 0.073 0.927 16 C -0.171 4.171 17 N -0.526 5.526 18 Si 0.872 3.128 19 H -0.208 1.208 20 H -0.198 1.198 21 H -0.206 1.206 22 H 0.091 0.909 23 H 0.084 0.916 24 H 0.107 0.893 25 H 0.158 0.842 26 H 0.248 0.752 27 H 0.140 0.860 28 H 0.161 0.839 29 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges 2.142 8.444 6.079 10.623 hybrid contribution 1.376 0.865 -1.789 2.417 sum 3.517 9.309 4.289 10.837 Atomic orbital electron populations 1.20796 0.89931 1.03885 1.02675 1.19756 0.97525 0.90716 1.02672 1.17175 0.89069 0.80982 1.05315 1.91450 1.80114 1.45955 1.94169 1.20565 0.92232 0.97797 1.06831 1.21002 0.84717 0.93989 1.07600 1.98339 1.09236 1.98896 1.96975 1.17883 0.89210 0.84226 1.00670 1.84698 1.75078 1.34828 1.33524 1.20269 0.91958 0.96048 0.92511 1.18286 0.92968 0.86076 0.92100 0.93227 1.59750 1.08198 1.20381 1.51227 1.22513 1.33263 1.13711 0.97423 0.92688 1.25800 0.98961 0.92735 0.99627 1.70863 1.33125 1.35620 1.12991 0.84006 0.76375 0.76933 0.75520 1.20825 1.19836 1.20607 0.90914 0.91555 0.89345 0.84233 0.75194 0.85968 0.83882 0.92000 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.92 9.06 36.01 0.33 -1.59 15 2 C -0.11 -1.93 5.88 -104.56 -0.62 -2.55 15 3 C 0.09 1.59 7.24 -39.43 -0.29 1.30 15 4 F -0.14 -2.20 16.47 2.25 0.04 -2.17 15 5 C -0.15 -2.45 9.80 -39.50 -0.39 -2.84 15 6 C -0.05 -0.77 6.33 -39.37 -0.25 -1.02 15 7 Cl -0.06 -0.94 28.50 -51.86 -1.48 -2.41 15 8 C 0.13 2.38 6.47 -39.21 -0.25 2.13 15 9 O -0.47 -8.55 9.73 -19.64 -0.19 -8.74 15 10 C -0.01 -0.13 4.90 -104.49 -0.51 -0.64 15 11 C 0.22 4.75 1.93 -70.01 -0.14 4.62 15 12 H 0.05 1.10 4.61 -51.93 -0.24 0.86 15 13 N -0.86 -18.46 9.00 -6.65 -0.06 -18.52 15 14 C -0.63 -15.81 8.81 -34.44 -0.30 -16.11 15 15 H 0.05 1.50 7.99 -52.49 -0.42 1.08 15 16 C 0.04 0.94 5.44 -17.82 -0.10 0.85 15 17 N -0.89 -25.25 13.69 55.43 0.76 -24.49 15 18 Si 1.04 23.01 26.52 -169.99 -4.51 18.51 15 19 H -0.28 -6.39 7.11 56.52 0.40 -5.99 15 20 H -0.27 -5.51 5.53 56.52 0.31 -5.20 15 21 H -0.28 -5.88 7.11 56.52 0.40 -5.48 15 22 H 0.07 1.08 8.14 -51.93 -0.42 0.66 15 23 H 0.07 0.97 7.63 -51.93 -0.40 0.58 15 24 H 0.09 1.58 6.39 -51.93 -0.33 1.25 15 25 H 0.14 1.86 8.06 -52.49 -0.42 1.44 15 26 H 0.39 6.32 9.06 45.56 0.41 6.73 15 27 H 0.33 7.01 5.63 -39.29 -0.22 6.79 15 28 H 0.34 7.32 6.07 -39.29 -0.24 7.08 15 29 H 0.27 7.62 8.73 -40.82 -0.36 7.26 15 LS Contribution 261.83 15.07 3.95 3.95 Total: -1.00 -27.14 261.83 -5.53 -32.66 By element: Atomic # 1 Polarization: 18.57 SS G_CDS: -1.52 Total: 17.06 kcal Atomic # 6 Polarization: -13.33 SS G_CDS: -2.51 Total: -15.85 kcal Atomic # 7 Polarization: -43.71 SS G_CDS: 0.70 Total: -43.01 kcal Atomic # 8 Polarization: -8.55 SS G_CDS: -0.19 Total: -8.74 kcal Atomic # 9 Polarization: -2.20 SS G_CDS: 0.04 Total: -2.17 kcal Atomic # 14 Polarization: 23.01 SS G_CDS: -4.51 Total: 18.51 kcal Atomic # 17 Polarization: -0.94 SS G_CDS: -1.48 Total: -2.41 kcal Total LS contribution 3.95 Total: 3.95 kcal Total: -27.14 -5.53 -32.66 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260386152.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.050 kcal (2) G-P(sol) polarization free energy of solvation -27.137 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.187 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.527 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.663 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.714 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds