Wall clock time and date at job start Mon Mar 30 2020 06:55:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35918 * 117.00204 * 2 1 4 4 C 1.38677 * 120.04481 * 0.02562 * 3 2 1 5 5 C 1.38361 * 119.93352 * 179.97438 * 4 3 2 6 6 F 1.35100 * 119.99165 * 180.02562 * 5 4 3 7 7 C 1.38510 * 120.02616 * 359.72468 * 5 4 3 8 8 C 1.38217 * 120.08742 * 0.55227 * 7 5 4 9 9 C 1.50700 * 119.96561 * 179.72917 * 8 7 5 10 10 H 1.09006 * 109.47033 * 219.72507 * 9 8 7 11 11 N 1.46904 * 109.46886 * 339.71794 * 9 8 7 12 12 C 1.50700 * 109.47566 * 99.72112 * 9 8 7 13 13 H 1.07997 * 119.99627 * 354.47151 * 12 9 8 14 14 C 1.37869 * 119.99853 * 174.47200 * 12 9 8 15 15 N 1.31517 * 119.99935 * 163.82194 * 14 12 9 16 16 Si 1.86796 * 120.00506 * 343.82625 * 14 12 9 17 17 H 1.48504 * 109.47192 * 270.00364 * 16 14 12 18 18 H 1.48501 * 109.47149 * 29.99944 * 16 14 12 19 19 H 1.48501 * 109.47770 * 149.99898 * 16 14 12 20 20 C 1.38261 * 120.07075 * 359.44884 * 8 7 5 21 21 Cl 1.73601 * 120.01330 * 180.25720 * 20 8 7 22 22 H 1.09008 * 109.46602 * 300.00144 * 1 2 3 23 23 H 1.08997 * 109.47195 * 60.00181 * 1 2 3 24 24 H 1.09004 * 109.47255 * 180.02562 * 1 2 3 25 25 H 1.07996 * 120.03573 * 359.95507 * 4 3 2 26 26 H 1.07993 * 119.95276 * 180.27040 * 7 5 4 27 27 H 1.00904 * 110.99471 * 66.11254 * 11 9 8 28 28 H 1.00901 * 110.99943 * 190.06139 * 11 9 8 29 29 H 0.97007 * 120.00063 * 354.92974 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2110 0.0000 4 6 1.2918 2.3747 0.0005 5 6 1.9224 3.6062 0.0011 6 9 1.1887 4.7406 0.0021 7 6 3.3057 3.6766 0.0068 8 6 4.0585 2.5175 0.0005 9 6 5.5634 2.5973 0.0007 10 1 5.9680 1.8307 -0.6603 11 7 5.9834 3.9231 -0.4725 12 6 6.0781 2.3769 1.3998 13 1 5.3842 2.2861 2.2223 14 6 7.4348 2.2913 1.6296 15 7 7.9041 2.4188 2.8516 16 14 8.6066 1.9941 0.2056 17 1 8.7976 0.5334 0.0182 18 1 8.0382 2.5819 -1.0341 19 1 9.9155 2.6307 0.5002 20 6 3.4324 1.2848 0.0000 21 17 4.3794 -0.1702 -0.0012 22 1 -0.3633 0.5139 0.8901 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3634 -1.0277 0.0005 25 1 0.2132 2.3197 0.0002 26 1 3.7966 4.6385 0.0117 27 1 5.7056 4.6435 0.1771 28 1 6.9784 3.9495 -0.6380 29 1 7.3050 2.6461 3.5800 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260415951.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:55:23 Heat of formation + Delta-G solvation = -62.673172 kcal Electronic energy + Delta-G solvation = -17254.048802 eV Core-core repulsion = 14117.980169 eV Total energy + Delta-G solvation = -3136.068633 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.69235 -39.93996 -37.65865 -35.68700 -34.62665 -31.93152 -30.02935 -29.48891 -27.37894 -25.81387 -22.95366 -22.27101 -20.17918 -17.83823 -17.78111 -16.89334 -16.19442 -15.95933 -15.86787 -15.19180 -14.78305 -14.38935 -13.85001 -13.41536 -13.05107 -12.91411 -12.52178 -12.16710 -12.12786 -11.49230 -11.34119 -11.14528 -10.92655 -10.58500 -10.45803 -10.11038 -9.93274 -9.36054 -8.56131 -8.34207 -7.86725 -7.65444 -6.54355 -4.27008 1.36435 1.57796 2.78462 3.25106 3.28920 3.35658 3.47292 3.84069 4.35079 4.44990 4.88664 5.00938 5.09824 5.11021 5.30735 5.31622 5.42252 5.63777 5.96636 6.07024 6.20581 6.48289 6.53012 6.86603 7.13083 7.36948 7.65902 8.14522 8.28770 8.41129 8.76477 9.43351 10.77582 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.023303 B = 0.008172 C = 0.006688 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1201.296617 B = 3425.385302 C = 4185.292702 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.302 6.302 3 C 0.157 3.843 4 C -0.260 4.260 5 C 0.133 3.867 6 F -0.141 7.141 7 C -0.168 4.168 8 C 0.049 3.951 9 C 0.210 3.790 10 H 0.060 0.940 11 N -0.856 5.856 12 C -0.616 4.616 13 H 0.059 0.941 14 C 0.040 3.960 15 N -0.896 5.896 16 Si 1.034 2.966 17 H -0.281 1.281 18 H -0.268 1.268 19 H -0.284 1.284 20 C -0.078 4.078 21 Cl -0.046 7.046 22 H 0.055 0.945 23 H 0.055 0.945 24 H 0.100 0.900 25 H 0.139 0.861 26 H 0.146 0.854 27 H 0.329 0.671 28 H 0.332 0.668 29 H 0.271 0.729 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.166 -1.537 -6.658 13.954 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.215 6.215 3 C 0.111 3.889 4 C -0.280 4.280 5 C 0.113 3.887 6 F -0.119 7.119 7 C -0.187 4.187 8 C 0.047 3.953 9 C 0.101 3.899 10 H 0.078 0.922 11 N -0.388 5.388 12 C -0.655 4.655 13 H 0.078 0.922 14 C -0.167 4.167 15 N -0.529 5.529 16 Si 0.861 3.139 17 H -0.207 1.207 18 H -0.194 1.194 19 H -0.209 1.209 20 C -0.106 4.106 21 Cl -0.017 7.017 22 H 0.074 0.926 23 H 0.074 0.926 24 H 0.118 0.882 25 H 0.157 0.843 26 H 0.164 0.836 27 H 0.140 0.860 28 H 0.147 0.853 29 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges -10.902 -2.230 -7.651 13.505 hybrid contribution -1.491 0.425 1.454 2.125 sum -12.393 -1.806 -6.198 13.973 Atomic orbital electron populations 1.23073 0.78578 1.03879 1.01358 1.86176 1.21124 1.25761 1.88458 1.18247 0.90185 0.84291 0.96215 1.20785 1.00388 0.90725 1.16093 1.17415 0.89290 0.81216 1.00763 1.91465 1.77376 1.49273 1.93831 1.20866 0.90518 1.00509 1.06849 1.19769 0.98214 0.88819 0.88495 1.18395 0.85418 0.89445 0.96658 0.92211 1.59735 1.20373 1.06556 1.52093 1.22380 0.94191 1.56782 0.92162 0.92243 1.25724 0.96818 0.92956 1.01249 1.70788 1.38732 1.42518 1.00820 0.84165 0.76229 0.77947 0.75535 1.20718 1.19407 1.20936 1.19961 0.88025 0.89465 1.13149 1.98341 1.71810 1.34609 1.96892 0.92630 0.92636 0.88173 0.84337 0.83625 0.85961 0.85333 0.91864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.27 9.81 101.05 0.99 1.26 15 2 O -0.30 -4.66 9.95 -19.48 -0.19 -4.86 15 3 C 0.16 2.73 6.68 -39.20 -0.26 2.47 15 4 C -0.26 -4.10 9.01 -39.37 -0.35 -4.45 15 5 C 0.13 2.27 7.30 -39.44 -0.29 1.98 15 6 F -0.14 -2.28 17.27 2.25 0.04 -2.24 15 7 C -0.17 -3.18 9.25 -39.49 -0.37 -3.54 15 8 C 0.05 1.02 5.03 -104.62 -0.53 0.50 15 9 C 0.21 4.79 1.87 -70.01 -0.13 4.66 15 10 H 0.06 1.41 5.95 -51.93 -0.31 1.10 15 11 N -0.86 -17.77 8.50 -6.65 -0.06 -17.83 15 12 C -0.62 -16.15 8.72 -34.44 -0.30 -16.46 15 13 H 0.06 1.74 7.99 -52.49 -0.42 1.32 15 14 C 0.04 1.07 5.44 -17.82 -0.10 0.98 15 15 N -0.90 -26.24 13.70 55.43 0.76 -25.48 15 16 Si 1.03 23.64 26.56 -169.99 -4.52 19.13 15 17 H -0.28 -6.40 7.11 56.52 0.40 -5.99 15 18 H -0.27 -5.55 5.46 56.52 0.31 -5.24 15 19 H -0.28 -6.51 7.11 56.52 0.40 -6.11 15 20 C -0.08 -1.57 6.32 -39.36 -0.25 -1.82 15 21 Cl -0.05 -0.92 26.86 -51.86 -1.39 -2.32 15 22 H 0.06 0.51 7.66 -51.92 -0.40 0.12 15 23 H 0.06 0.49 7.66 -51.93 -0.40 0.09 15 24 H 0.10 0.77 8.14 -51.93 -0.42 0.35 15 25 H 0.14 1.74 6.30 -52.49 -0.33 1.41 15 26 H 0.15 2.64 6.40 -52.49 -0.34 2.30 15 27 H 0.33 6.57 7.58 -39.29 -0.30 6.27 15 28 H 0.33 6.85 5.76 -39.29 -0.23 6.62 15 29 H 0.27 7.98 8.73 -40.82 -0.36 7.62 15 LS Contribution 264.11 15.07 3.98 3.98 Total: -1.00 -28.85 264.11 -5.34 -34.19 By element: Atomic # 1 Polarization: 12.23 SS G_CDS: -2.38 Total: 9.85 kcal Atomic # 6 Polarization: -12.84 SS G_CDS: -1.58 Total: -14.42 kcal Atomic # 7 Polarization: -44.01 SS G_CDS: 0.70 Total: -43.31 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -0.19 Total: -4.86 kcal Atomic # 9 Polarization: -2.28 SS G_CDS: 0.04 Total: -2.24 kcal Atomic # 14 Polarization: 23.64 SS G_CDS: -4.52 Total: 19.13 kcal Atomic # 17 Polarization: -0.92 SS G_CDS: -1.39 Total: -2.32 kcal Total LS contribution 3.98 Total: 3.98 kcal Total: -28.85 -5.34 -34.19 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260415951.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.479 kcal (2) G-P(sol) polarization free energy of solvation -28.851 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.329 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.344 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.195 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.673 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds