Wall clock time and date at job start Mon Mar 30 2020 06:54:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35923 * 116.99637 * 2 1 4 4 C 1.38708 * 120.03458 * 0.25129 * 3 2 1 5 5 C 1.38331 * 119.93255 * 180.31255 * 4 3 2 6 6 F 1.35101 * 120.00127 * 179.67902 * 5 4 3 7 7 C 1.38606 * 119.99313 * 359.71138 * 5 4 3 8 8 Cl 1.73604 * 119.96851 * 179.97438 * 7 5 4 9 9 C 1.38291 * 120.06493 * 359.97438 * 7 5 4 10 10 C 1.38192 * 120.06374 * 0.02833 * 9 7 5 11 11 C 1.50700 * 119.99474 * 179.97438 * 10 9 7 12 12 H 1.09004 * 109.47210 * 144.99900 * 11 10 9 13 13 N 1.46899 * 109.47483 * 24.99570 * 11 10 9 14 14 C 1.50702 * 109.46869 * 264.99607 * 11 10 9 15 15 H 1.08002 * 120.00299 * 0.02562 * 14 11 10 16 16 C 1.37884 * 119.99942 * 179.72213 * 14 11 10 17 17 N 1.31514 * 119.99698 * 0.28408 * 16 14 11 18 18 Si 1.86794 * 119.99837 * 180.27476 * 16 14 11 19 19 H 1.48501 * 109.47188 * 90.00793 * 18 16 14 20 20 H 1.48501 * 109.47085 * 210.00372 * 18 16 14 21 21 H 1.48498 * 109.47634 * 330.00608 * 18 16 14 22 22 H 1.08994 * 109.47453 * 300.00178 * 1 2 3 23 23 H 1.09000 * 109.47202 * 59.99743 * 1 2 3 24 24 H 1.08995 * 109.46868 * 179.97438 * 1 2 3 25 25 H 1.07996 * 120.03575 * 0.02562 * 4 3 2 26 26 H 1.08002 * 119.96878 * 180.02562 * 9 7 5 27 27 H 1.00902 * 111.00292 * 176.04974 * 13 11 10 28 28 H 1.00903 * 111.00048 * 300.00270 * 13 11 10 29 29 H 0.97005 * 119.99651 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2111 0.0000 4 6 1.2912 2.3748 0.0053 5 6 1.9213 3.6063 -0.0013 6 9 1.1874 4.7406 -0.0027 7 6 3.3056 3.6763 -0.0070 8 17 4.0957 5.2221 -0.0159 9 6 4.0580 2.5160 -0.0057 10 6 3.4311 1.2844 0.0008 11 6 4.2526 0.0210 0.0016 12 1 3.7472 -0.7406 0.5956 13 7 5.5742 0.2965 0.5807 14 6 4.4169 -0.4723 -1.4129 15 1 3.9714 0.0747 -2.2307 16 6 5.1412 -1.6184 -1.6636 17 7 5.6839 -2.2842 -0.6678 18 14 5.3512 -2.2256 -3.4176 19 1 6.5733 -1.6222 -4.0073 20 1 5.4804 -3.7049 -3.4172 21 1 4.1671 -1.8323 -4.2228 22 1 -0.3634 0.5138 0.8899 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 0.2127 2.3196 0.0098 26 1 5.1365 2.5724 -0.0098 27 1 6.1212 -0.5485 0.6518 28 1 6.0631 0.9999 0.0475 29 1 6.1932 -3.0908 -0.8441 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260439533.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:54:21 Heat of formation + Delta-G solvation = -66.875804 kcal Electronic energy + Delta-G solvation = -17224.550312 eV Core-core repulsion = 14088.299439 eV Total energy + Delta-G solvation = -3136.250873 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.66853 -39.83586 -37.27560 -36.06127 -34.57500 -31.65239 -29.79088 -29.30982 -26.90749 -25.98398 -23.25623 -22.08052 -20.32074 -18.18397 -16.85658 -16.60916 -15.89585 -15.65108 -15.56232 -15.09991 -14.53456 -14.24444 -14.16443 -13.16466 -12.91351 -12.84789 -12.47631 -12.06603 -11.74179 -11.54963 -11.19878 -11.13298 -10.91350 -10.79358 -10.61256 -10.28988 -9.99488 -9.72815 -8.72099 -8.42819 -7.67799 -7.24260 -6.11492 -4.26932 1.49206 1.51779 2.39125 3.21297 3.28948 3.32855 3.61078 3.92183 4.33050 4.41848 4.92575 5.08246 5.19625 5.33776 5.35992 5.49508 5.66075 5.88431 6.12603 6.30974 6.39154 6.52439 6.77187 7.04118 7.54951 7.71845 7.76625 8.02486 8.61525 8.87098 9.04519 9.43487 10.86882 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.020876 B = 0.007284 C = 0.006138 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1340.941110 B = 3842.990221 C = 4560.493161 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.285 6.285 3 C 0.159 3.841 4 C -0.241 4.241 5 C 0.117 3.883 6 F -0.136 7.136 7 C -0.106 4.106 8 Cl -0.071 7.071 9 C -0.043 4.043 10 C -0.053 4.053 11 C 0.250 3.750 12 H 0.060 0.940 13 N -0.852 5.852 14 C -0.538 4.538 15 H 0.055 0.945 16 C 0.068 3.932 17 N -0.893 5.893 18 Si 0.897 3.103 19 H -0.280 1.280 20 H -0.285 1.285 21 H -0.274 1.274 22 H 0.051 0.949 23 H 0.052 0.948 24 H 0.099 0.901 25 H 0.140 0.860 26 H 0.149 0.851 27 H 0.359 0.641 28 H 0.311 0.689 29 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.141 7.635 1.452 10.555 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.197 6.197 3 C 0.112 3.888 4 C -0.261 4.261 5 C 0.097 3.903 6 F -0.115 7.115 7 C -0.134 4.134 8 Cl -0.042 7.042 9 C -0.062 4.062 10 C -0.055 4.055 11 C 0.140 3.860 12 H 0.078 0.922 13 N -0.383 5.383 14 C -0.577 4.577 15 H 0.073 0.927 16 C -0.135 4.135 17 N -0.532 5.532 18 Si 0.725 3.275 19 H -0.206 1.206 20 H -0.211 1.211 21 H -0.199 1.199 22 H 0.070 0.930 23 H 0.071 0.929 24 H 0.118 0.882 25 H 0.158 0.842 26 H 0.167 0.833 27 H 0.176 0.824 28 H 0.120 0.880 29 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -7.321 7.658 2.160 10.813 hybrid contribution 0.068 -0.237 -1.979 1.994 sum -7.253 7.421 0.181 10.379 Atomic orbital electron populations 1.23073 0.79452 1.03884 1.00800 1.86339 1.20213 1.25495 1.87608 1.18651 0.91801 0.83629 0.94699 1.20940 1.00685 0.90587 1.13895 1.16866 0.87112 0.81939 1.04395 1.91471 1.77022 1.48940 1.94065 1.20797 0.90656 0.87993 1.13923 1.98329 1.80301 1.28217 1.97376 1.20632 1.00772 0.88376 0.96423 1.20010 0.90504 0.97276 0.97701 1.17842 0.86944 0.87080 0.94152 0.92219 1.59587 1.06911 1.16138 1.55617 1.21703 1.33442 1.09714 0.92868 0.92705 1.24975 0.95221 0.95844 0.97420 1.69732 1.34844 1.17977 1.30647 0.86508 0.78548 0.77898 0.84542 1.20608 1.21090 1.19886 0.93021 0.92908 0.88244 0.84184 0.83339 0.82403 0.87962 0.92428 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.30 9.81 101.05 0.99 1.29 15 2 O -0.28 -5.34 9.63 -19.50 -0.19 -5.53 15 3 C 0.16 3.04 6.66 -39.24 -0.26 2.78 15 4 C -0.24 -3.98 9.01 -39.37 -0.35 -4.34 15 5 C 0.12 2.00 7.27 -39.41 -0.29 1.71 15 6 F -0.14 -2.23 16.83 2.25 0.04 -2.19 15 7 C -0.11 -1.86 6.33 -39.43 -0.25 -2.11 15 8 Cl -0.07 -1.11 28.61 -51.86 -1.48 -2.59 15 9 C -0.04 -0.82 9.05 -39.58 -0.36 -1.17 15 10 C -0.05 -1.12 5.01 -104.47 -0.52 -1.64 15 11 C 0.25 6.02 2.67 -70.02 -0.19 5.83 15 12 H 0.06 1.61 7.70 -51.93 -0.40 1.21 15 13 N -0.85 -19.41 8.78 -6.65 -0.06 -19.47 15 14 C -0.54 -14.04 8.71 -34.44 -0.30 -14.34 15 15 H 0.05 1.46 7.74 -52.49 -0.41 1.06 15 16 C 0.07 1.78 5.38 -17.82 -0.10 1.68 15 17 N -0.89 -23.96 11.53 55.43 0.64 -23.32 15 18 Si 0.90 20.60 29.54 -169.99 -5.02 15.58 15 19 H -0.28 -6.38 7.11 56.52 0.40 -5.98 15 20 H -0.29 -6.52 7.11 56.52 0.40 -6.12 15 21 H -0.27 -6.31 7.11 56.52 0.40 -5.91 15 22 H 0.05 0.56 7.65 -51.93 -0.40 0.16 15 23 H 0.05 0.60 7.67 -51.93 -0.40 0.20 15 24 H 0.10 1.07 8.14 -51.93 -0.42 0.65 15 25 H 0.14 1.89 6.30 -52.49 -0.33 1.56 15 26 H 0.15 2.70 6.29 -52.49 -0.33 2.37 15 27 H 0.36 8.81 7.07 -39.29 -0.28 8.53 15 28 H 0.31 6.64 7.20 -39.29 -0.28 6.35 15 29 H 0.27 6.84 8.31 -40.82 -0.34 6.50 15 LS Contribution 270.20 15.07 4.07 4.07 Total: -1.00 -27.16 270.20 -6.01 -33.17 By element: Atomic # 1 Polarization: 12.96 SS G_CDS: -2.38 Total: 10.58 kcal Atomic # 6 Polarization: -8.68 SS G_CDS: -1.62 Total: -10.30 kcal Atomic # 7 Polarization: -43.37 SS G_CDS: 0.58 Total: -42.79 kcal Atomic # 8 Polarization: -5.34 SS G_CDS: -0.19 Total: -5.53 kcal Atomic # 9 Polarization: -2.23 SS G_CDS: 0.04 Total: -2.19 kcal Atomic # 14 Polarization: 20.60 SS G_CDS: -5.02 Total: 15.58 kcal Atomic # 17 Polarization: -1.11 SS G_CDS: -1.48 Total: -2.59 kcal Total LS contribution 4.07 Total: 4.07 kcal Total: -27.16 -6.01 -33.17 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260439533.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.708 kcal (2) G-P(sol) polarization free energy of solvation -27.162 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.006 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.168 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.876 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds