Wall clock time and date at job start Mon Mar 30 2020 06:56:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35946 * 116.99382 * 2 1 4 4 C 1.38712 * 120.02834 * 0.02562 * 3 2 1 5 5 C 1.38228 * 119.95542 * 179.97438 * 4 3 2 6 6 Cl 1.73601 * 119.99516 * 179.97438 * 5 4 3 7 7 C 1.38588 * 120.01035 * 0.02562 * 5 4 3 8 8 F 1.35105 * 119.97734 * 179.97438 * 7 5 4 9 9 C 1.38400 * 120.04935 * 359.95690 * 7 5 4 10 10 C 1.50697 * 119.98008 * 180.02562 * 9 7 5 11 11 H 1.08998 * 109.47228 * 325.02363 * 10 9 7 12 12 N 1.46900 * 109.47217 * 205.02356 * 10 9 7 13 13 C 1.50697 * 109.47142 * 85.02081 * 10 9 7 14 14 H 1.08006 * 119.99928 * 0.02562 * 13 10 9 15 15 C 1.37882 * 120.00342 * 179.97438 * 13 10 9 16 16 N 1.31512 * 119.99414 * 0.02562 * 15 13 10 17 17 Si 1.86790 * 120.00249 * 180.02562 * 15 13 10 18 18 H 1.48504 * 109.47048 * 0.02562 * 17 15 13 19 19 H 1.48504 * 109.47438 * 120.00226 * 17 15 13 20 20 H 1.48504 * 109.47113 * 240.00381 * 17 15 13 21 21 C 1.38193 * 120.03771 * 0.04213 * 9 7 5 22 22 H 1.09003 * 109.46839 * 60.00698 * 1 2 3 23 23 H 1.09002 * 109.46775 * 180.02562 * 1 2 3 24 24 H 1.08997 * 109.47236 * 300.00309 * 1 2 3 25 25 H 1.07993 * 120.02281 * 359.95819 * 4 3 2 26 26 H 1.00893 * 111.00235 * 176.05152 * 12 10 9 27 27 H 1.00905 * 110.99538 * 299.99864 * 12 10 9 28 28 H 0.96996 * 120.00033 * 179.97438 * 16 15 13 29 29 H 1.08000 * 119.99948 * 180.24939 * 21 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0461 1.2114 0.0000 4 6 1.2911 2.3750 0.0005 5 6 1.9201 3.6059 0.0011 6 17 0.9761 5.0628 0.0011 7 6 3.3041 3.6770 0.0005 8 9 3.9182 4.8805 0.0005 9 6 4.0578 2.5162 0.0004 10 6 5.5626 2.5954 0.0004 11 1 5.8812 3.4555 -0.5886 12 7 6.1176 1.3680 -0.5857 13 6 6.0578 2.7448 1.4158 14 1 5.3532 2.7785 2.2337 15 6 7.4104 2.8373 1.6669 16 7 8.2683 2.7957 0.6711 17 14 8.0242 3.0217 3.4215 18 1 6.8665 3.0413 4.3514 19 1 8.9101 1.8786 3.7587 20 1 8.7839 4.2913 3.5493 21 6 3.4310 1.2846 -0.0002 22 1 -0.3633 0.5137 -0.8901 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5139 0.8899 25 1 0.2126 2.3193 0.0003 26 1 7.1226 1.4233 -0.6561 27 1 5.8364 0.5558 -0.0571 28 1 9.2199 2.8612 0.8476 29 1 4.0197 0.3791 0.0038 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260476362.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:56:36 Heat of formation + Delta-G solvation = -67.515325 kcal Electronic energy + Delta-G solvation = -17164.376291 eV Core-core repulsion = 14028.097686 eV Total energy + Delta-G solvation = -3136.278604 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -48.14301 -39.86326 -37.41611 -36.36857 -34.49952 -31.72366 -29.87968 -29.21683 -27.04291 -26.10229 -23.42224 -22.04608 -20.29684 -17.73497 -16.93386 -16.73961 -16.62593 -15.67261 -14.90937 -14.88467 -14.84759 -14.09923 -14.02472 -13.12912 -12.86293 -12.57075 -12.51963 -12.49311 -11.86035 -11.76346 -11.32436 -11.09286 -10.91868 -10.81794 -10.62077 -10.35806 -9.97535 -9.83168 -8.77061 -8.33249 -7.74063 -7.31485 -6.16947 -4.33145 1.41745 1.60925 2.24329 3.19644 3.28484 3.33277 3.38412 3.90536 4.30437 4.63762 5.01471 5.06833 5.12132 5.13983 5.32143 5.42352 5.52569 5.88430 6.03293 6.20345 6.36632 6.62740 6.78068 7.03540 7.44712 7.56231 7.67780 7.94090 8.55017 8.81152 8.99989 9.38360 10.82144 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.020619 B = 0.007189 C = 0.006051 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1357.631232 B = 3893.708665 C = 4626.149442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.311 6.311 3 C 0.122 3.878 4 C -0.201 4.201 5 C -0.038 4.038 6 Cl -0.066 7.066 7 C 0.075 3.925 8 F -0.124 7.124 9 C -0.012 4.012 10 C 0.242 3.758 11 H 0.060 0.940 12 N -0.849 5.849 13 C -0.544 4.544 14 H 0.058 0.942 15 C 0.069 3.931 16 N -0.891 5.891 17 Si 0.900 3.100 18 H -0.272 1.272 19 H -0.282 1.282 20 H -0.281 1.281 21 C -0.110 4.110 22 H 0.054 0.946 23 H 0.098 0.902 24 H 0.054 0.946 25 H 0.137 0.863 26 H 0.360 0.640 27 H 0.314 0.686 28 H 0.267 0.733 29 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.481 -2.783 -1.358 13.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.225 6.225 3 C 0.077 3.923 4 C -0.221 4.221 5 C -0.066 4.066 6 Cl -0.037 7.037 7 C 0.054 3.946 8 F -0.102 7.102 9 C -0.014 4.014 10 C 0.132 3.868 11 H 0.077 0.923 12 N -0.380 5.380 13 C -0.584 4.584 14 H 0.076 0.924 15 C -0.134 4.134 16 N -0.529 5.529 17 Si 0.728 3.272 18 H -0.196 1.196 19 H -0.208 1.208 20 H -0.207 1.207 21 C -0.129 4.129 22 H 0.072 0.928 23 H 0.116 0.884 24 H 0.072 0.928 25 H 0.155 0.845 26 H 0.177 0.823 27 H 0.124 0.876 28 H 0.077 0.923 29 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -13.675 -2.584 -2.066 14.069 hybrid contribution 0.568 0.608 1.935 2.106 sum -13.107 -1.976 -0.131 13.256 Atomic orbital electron populations 1.23035 0.78906 1.03672 1.01276 1.86111 1.20934 1.26421 1.89039 1.18836 0.92156 0.83518 0.97774 1.20659 1.00088 0.89896 1.11451 1.20567 0.89920 0.88170 1.07920 1.98340 1.72187 1.36162 1.97051 1.17152 0.87929 0.81928 1.07567 1.91507 1.82912 1.41890 1.93883 1.20432 0.99260 0.89521 0.92181 1.17963 0.82386 0.91931 0.94505 0.92257 1.59552 1.18825 1.03962 1.55626 1.21714 0.92168 1.51959 0.92550 0.92391 1.24989 0.96622 0.94047 0.97736 1.69738 1.02584 1.49870 1.30751 0.86397 0.78819 0.77841 0.84166 1.19646 1.20835 1.20719 1.20247 0.90199 0.98911 1.03510 0.92751 0.88398 0.92770 0.84514 0.82301 0.87647 0.92315 0.83633 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.26 9.81 101.05 0.99 1.25 15 2 O -0.31 -4.52 10.50 -19.57 -0.21 -4.73 15 3 C 0.12 2.03 6.68 -39.24 -0.26 1.77 15 4 C -0.20 -3.14 8.82 -39.41 -0.35 -3.49 15 5 C -0.04 -0.67 6.32 -39.46 -0.25 -0.92 15 6 Cl -0.07 -1.03 28.61 -51.86 -1.48 -2.52 15 7 C 0.08 1.56 7.21 -39.39 -0.28 1.28 15 8 F -0.12 -2.75 16.13 2.25 0.04 -2.71 15 9 C -0.01 -0.26 5.00 -104.58 -0.52 -0.78 15 10 C 0.24 5.97 2.72 -70.02 -0.19 5.78 15 11 H 0.06 1.64 7.79 -51.93 -0.40 1.23 15 12 N -0.85 -19.54 8.79 -6.65 -0.06 -19.60 15 13 C -0.54 -14.48 8.71 -34.44 -0.30 -14.78 15 14 H 0.06 1.57 7.74 -52.48 -0.41 1.17 15 15 C 0.07 1.84 5.38 -17.82 -0.10 1.74 15 16 N -0.89 -24.12 11.54 55.43 0.64 -23.49 15 17 Si 0.90 20.83 29.54 -169.99 -5.02 15.81 15 18 H -0.27 -6.31 7.11 56.52 0.40 -5.91 15 19 H -0.28 -6.43 7.11 56.52 0.40 -6.03 15 20 H -0.28 -6.52 7.11 56.52 0.40 -6.12 15 21 C -0.11 -2.09 9.20 -39.43 -0.36 -2.45 15 22 H 0.05 0.47 7.66 -51.93 -0.40 0.07 15 23 H 0.10 0.70 8.14 -51.93 -0.42 0.28 15 24 H 0.05 0.48 7.66 -51.93 -0.40 0.08 15 25 H 0.14 1.71 6.30 -52.49 -0.33 1.37 15 26 H 0.36 8.88 7.08 -39.30 -0.28 8.61 15 27 H 0.31 6.74 7.20 -39.29 -0.28 6.46 15 28 H 0.27 6.89 8.31 -40.82 -0.34 6.55 15 29 H 0.15 2.69 6.29 -52.49 -0.33 2.36 15 LS Contribution 270.44 15.07 4.08 4.08 Total: -1.00 -27.63 270.44 -6.03 -33.66 By element: Atomic # 1 Polarization: 12.50 SS G_CDS: -2.38 Total: 10.11 kcal Atomic # 6 Polarization: -8.99 SS G_CDS: -1.62 Total: -10.61 kcal Atomic # 7 Polarization: -43.67 SS G_CDS: 0.58 Total: -43.09 kcal Atomic # 8 Polarization: -4.52 SS G_CDS: -0.21 Total: -4.73 kcal Atomic # 9 Polarization: -2.75 SS G_CDS: 0.04 Total: -2.71 kcal Atomic # 14 Polarization: 20.83 SS G_CDS: -5.02 Total: 15.81 kcal Atomic # 17 Polarization: -1.03 SS G_CDS: -1.48 Total: -2.52 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -27.63 -6.03 -33.66 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260476362.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.856 kcal (2) G-P(sol) polarization free energy of solvation -27.633 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.026 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.659 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.515 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds