Wall clock time and date at job start Mon Mar 30 2020 06:56:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35953 * 116.99648 * 2 1 4 4 C 1.38710 * 120.02345 * 359.97438 * 3 2 1 5 5 C 1.38233 * 119.95387 * 180.02562 * 4 3 2 6 6 Cl 1.73605 * 119.99288 * 180.02562 * 5 4 3 7 7 C 1.38588 * 120.01221 * 359.97438 * 5 4 3 8 8 F 1.35092 * 119.97978 * 180.02562 * 7 5 4 9 9 C 1.38400 * 120.04112 * 0.02562 * 7 5 4 10 10 C 1.50704 * 119.97118 * 179.97438 * 9 7 5 11 11 H 1.09002 * 109.46920 * 40.00530 * 10 9 7 12 12 N 1.46904 * 109.46890 * 159.99886 * 10 9 7 13 13 C 1.50697 * 109.47370 * 280.00271 * 10 9 7 14 14 H 1.08001 * 119.99712 * 354.47251 * 13 10 9 15 15 C 1.37877 * 120.00077 * 174.48108 * 13 10 9 16 16 N 1.31515 * 120.00205 * 163.83354 * 15 13 10 17 17 Si 1.86801 * 119.99637 * 343.82865 * 15 13 10 18 18 H 1.48504 * 109.47044 * 270.00013 * 17 15 13 19 19 H 1.48492 * 109.47426 * 30.00203 * 17 15 13 20 20 H 1.48503 * 109.46820 * 150.00371 * 17 15 13 21 21 C 1.38181 * 120.04962 * 0.27694 * 9 7 5 22 22 H 1.09007 * 109.47051 * 180.02562 * 1 2 3 23 23 H 1.08997 * 109.47433 * 300.00171 * 1 2 3 24 24 H 1.08999 * 109.47084 * 60.00977 * 1 2 3 25 25 H 1.07998 * 120.02835 * 0.02699 * 4 3 2 26 26 H 1.00904 * 110.99471 * 66.10573 * 12 10 9 27 27 H 1.00901 * 110.99943 * 190.05457 * 12 10 9 28 28 H 0.96994 * 119.99747 * 354.91288 * 16 15 13 29 29 H 1.07995 * 120.00879 * 179.72125 * 21 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2114 0.0000 4 6 1.2910 2.3750 -0.0005 5 6 1.9200 3.6059 -0.0011 6 17 0.9760 5.0629 -0.0011 7 6 3.3041 3.6771 -0.0005 8 9 3.9181 4.8805 -0.0005 9 6 4.0576 2.5163 0.0000 10 6 5.5626 2.5955 0.0000 11 1 5.8839 3.4011 0.6603 12 7 6.1200 1.3218 0.4743 13 6 6.0513 2.8678 -1.3993 14 1 5.3517 2.8842 -2.2219 15 6 7.3915 3.0957 -1.6293 16 7 7.8716 3.0175 -2.8512 17 14 8.5253 3.5156 -0.2053 18 1 8.5614 4.9885 -0.0191 19 1 8.0219 2.8721 1.0346 20 1 9.8939 3.0202 -0.4997 21 6 3.4311 1.2847 -0.0058 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3634 0.5138 0.8899 24 1 -0.3633 0.5137 -0.8901 25 1 0.2125 2.3194 -0.0005 26 1 5.9197 0.5756 -0.1746 27 1 7.1122 1.4006 0.6397 28 1 7.3000 2.7278 -3.5792 29 1 4.0197 0.3792 -0.0099 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260476365.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:56:39 Heat of formation + Delta-G solvation = -62.973577 kcal Electronic energy + Delta-G solvation = -17224.330555 eV Core-core repulsion = 14088.248895 eV Total energy + Delta-G solvation = -3136.081659 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.22168 -39.93674 -37.51408 -36.45589 -34.64998 -32.01633 -30.10457 -29.47908 -27.11347 -26.01438 -23.09429 -22.15367 -20.15519 -17.86421 -17.75580 -16.98924 -16.82739 -15.75735 -15.16749 -15.00772 -14.82083 -14.12121 -13.76867 -13.21994 -13.00157 -12.82395 -12.65614 -12.41026 -12.26235 -11.94106 -11.76129 -11.14652 -10.91448 -10.68814 -10.41832 -10.28793 -10.06068 -9.39713 -8.63134 -8.44516 -7.86173 -7.64229 -6.57677 -4.31719 1.34114 1.52486 2.18225 3.27459 3.32176 3.34826 3.46634 3.82748 4.33060 4.55867 4.96193 5.04070 5.06312 5.09550 5.23588 5.37591 5.44887 5.67894 5.92657 5.96955 6.22304 6.42885 6.56955 6.88160 7.05931 7.45619 7.62700 8.11390 8.25625 8.39389 8.72342 9.39694 10.73799 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.022046 B = 0.007535 C = 0.006155 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1269.782697 B = 3715.031705 C = 4548.333967 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.311 6.311 3 C 0.123 3.877 4 C -0.200 4.200 5 C -0.038 4.038 6 Cl -0.064 7.064 7 C 0.076 3.924 8 F -0.123 7.123 9 C -0.007 4.007 10 C 0.215 3.785 11 H 0.055 0.945 12 N -0.854 5.854 13 C -0.626 4.626 14 H 0.059 0.941 15 C 0.038 3.962 16 N -0.893 5.893 17 Si 1.039 2.961 18 H -0.281 1.281 19 H -0.269 1.269 20 H -0.283 1.283 21 C -0.109 4.109 22 H 0.098 0.902 23 H 0.054 0.946 24 H 0.054 0.946 25 H 0.138 0.862 26 H 0.330 0.670 27 H 0.332 0.668 28 H 0.271 0.729 29 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.240 -3.206 6.684 15.174 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.225 6.225 3 C 0.077 3.923 4 C -0.219 4.219 5 C -0.066 4.066 6 Cl -0.035 7.035 7 C 0.056 3.944 8 F -0.101 7.101 9 C -0.009 4.009 10 C 0.105 3.895 11 H 0.073 0.927 12 N -0.386 5.386 13 C -0.665 4.665 14 H 0.077 0.923 15 C -0.169 4.169 16 N -0.526 5.526 17 Si 0.866 3.134 18 H -0.207 1.207 19 H -0.194 1.194 20 H -0.208 1.208 21 C -0.128 4.128 22 H 0.117 0.883 23 H 0.073 0.927 24 H 0.073 0.927 25 H 0.156 0.844 26 H 0.142 0.858 27 H 0.147 0.853 28 H 0.082 0.918 29 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -12.141 -2.697 7.673 14.613 hybrid contribution -1.404 0.247 -1.469 2.047 sum -13.545 -2.451 6.204 15.098 Atomic orbital electron populations 1.23045 0.78813 1.03747 1.01310 1.86110 1.21011 1.26348 1.89005 1.18827 0.92136 0.83571 0.97727 1.20686 1.00172 0.89878 1.11195 1.20554 0.89905 0.88283 1.07822 1.98344 1.72101 1.36025 1.97029 1.17112 0.88000 0.81864 1.07454 1.91506 1.82900 1.41846 1.93842 1.20062 0.98197 0.89713 0.92953 1.18232 0.84908 0.89970 0.96353 0.92735 1.59711 1.19102 1.07662 1.52078 1.22467 0.95478 1.56174 0.92376 0.92304 1.25814 0.96592 0.93110 1.01390 1.70786 1.38945 1.42031 1.00839 0.84098 0.76155 0.77881 0.75291 1.20705 1.19435 1.20836 1.20239 0.90273 0.98848 1.03431 0.88326 0.92726 0.92723 0.84408 0.85836 0.85314 0.91837 0.83488 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.25 9.81 101.05 0.99 1.24 15 2 O -0.31 -4.47 10.50 -19.59 -0.21 -4.67 15 3 C 0.12 2.02 6.69 -39.24 -0.26 1.75 15 4 C -0.20 -3.09 8.82 -39.41 -0.35 -3.44 15 5 C -0.04 -0.67 6.32 -39.45 -0.25 -0.92 15 6 Cl -0.06 -0.99 28.61 -51.86 -1.48 -2.48 15 7 C 0.08 1.58 7.21 -39.39 -0.28 1.29 15 8 F -0.12 -2.71 16.22 2.25 0.04 -2.67 15 9 C -0.01 -0.15 5.03 -104.58 -0.53 -0.68 15 10 C 0.22 5.00 2.13 -70.01 -0.15 4.85 15 11 H 0.05 1.32 6.54 -51.93 -0.34 0.98 15 12 N -0.85 -17.81 8.50 -6.65 -0.06 -17.86 15 13 C -0.63 -16.88 8.95 -34.44 -0.31 -17.19 15 14 H 0.06 1.76 7.99 -52.49 -0.42 1.34 15 15 C 0.04 1.05 5.44 -17.82 -0.10 0.96 15 16 N -0.89 -26.44 13.70 55.43 0.76 -25.68 15 17 Si 1.04 23.82 26.56 -169.99 -4.52 19.31 15 18 H -0.28 -6.43 7.11 56.52 0.40 -6.03 15 19 H -0.27 -5.56 5.46 56.52 0.31 -5.26 15 20 H -0.28 -6.47 7.11 56.52 0.40 -6.07 15 21 C -0.11 -2.04 9.21 -39.43 -0.36 -2.40 15 22 H 0.10 0.70 8.14 -51.92 -0.42 0.27 15 23 H 0.05 0.46 7.66 -51.93 -0.40 0.06 15 24 H 0.05 0.48 7.66 -51.93 -0.40 0.08 15 25 H 0.14 1.70 6.30 -52.49 -0.33 1.37 15 26 H 0.33 6.60 7.59 -39.29 -0.30 6.30 15 27 H 0.33 6.87 5.76 -39.29 -0.23 6.65 15 28 H 0.27 8.05 8.73 -40.82 -0.36 7.70 15 29 H 0.15 2.65 6.41 -52.49 -0.34 2.31 15 LS Contribution 266.12 15.07 4.01 4.01 Total: -1.00 -29.39 266.12 -5.46 -34.85 By element: Atomic # 1 Polarization: 12.13 SS G_CDS: -2.41 Total: 9.72 kcal Atomic # 6 Polarization: -12.94 SS G_CDS: -1.59 Total: -14.53 kcal Atomic # 7 Polarization: -44.24 SS G_CDS: 0.70 Total: -43.54 kcal Atomic # 8 Polarization: -4.47 SS G_CDS: -0.21 Total: -4.67 kcal Atomic # 9 Polarization: -2.71 SS G_CDS: 0.04 Total: -2.67 kcal Atomic # 14 Polarization: 23.82 SS G_CDS: -4.52 Total: 19.31 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -1.48 Total: -2.48 kcal Total LS contribution 4.01 Total: 4.01 kcal Total: -29.39 -5.46 -34.85 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260476365.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.119 kcal (2) G-P(sol) polarization free energy of solvation -29.391 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.463 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.974 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds