Wall clock time and date at job start Mon Mar 30 2020 06:54:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42909 * 1 3 3 C 1.35913 * 117.00146 * 2 1 4 4 C 1.38870 * 120.04923 * 270.22790 * 3 2 1 5 5 Cl 1.73605 * 120.00862 * 0.02738 * 4 3 2 6 6 C 1.38210 * 119.97614 * 180.29664 * 4 3 2 7 7 C 1.38267 * 120.06636 * 359.75185 * 6 4 3 8 8 C 1.38452 * 120.09213 * 359.97373 * 7 6 4 9 9 F 1.35097 * 119.98523 * 179.97438 * 8 7 6 10 10 C 1.38408 * 120.02886 * 0.02612 * 8 7 6 11 11 C 1.50696 * 120.03488 * 179.97438 * 10 8 7 12 12 H 1.09000 * 109.47002 * 164.99934 * 11 10 8 13 13 N 1.46899 * 109.46970 * 44.99943 * 11 10 8 14 14 C 1.50690 * 109.47412 * 285.00003 * 11 10 8 15 15 H 1.08006 * 119.99999 * 24.76532 * 14 11 10 16 16 C 1.37880 * 120.00158 * 204.76846 * 14 11 10 17 17 N 1.31512 * 120.00002 * 357.79954 * 16 14 11 18 18 Si 1.86800 * 119.99940 * 177.80329 * 16 14 11 19 19 H 1.48501 * 109.46784 * 269.99565 * 18 16 14 20 20 H 1.48501 * 109.47344 * 29.99933 * 18 16 14 21 21 H 1.48502 * 109.46838 * 149.99952 * 18 16 14 22 22 H 1.08995 * 109.47000 * 180.02562 * 1 2 3 23 23 H 1.09004 * 109.46569 * 300.00175 * 1 2 3 24 24 H 1.09002 * 109.46805 * 59.99782 * 1 2 3 25 25 H 1.08001 * 119.96696 * 179.72554 * 6 4 3 26 26 H 1.07998 * 119.95018 * 179.97438 * 7 6 4 27 27 H 1.00902 * 111.00548 * 172.71139 * 13 11 10 28 28 H 1.00898 * 111.00445 * 296.67060 * 13 11 10 29 29 H 0.97005 * 119.99685 * 354.41493 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0462 1.2110 0.0000 4 6 2.3576 1.8327 -1.2020 5 17 1.9582 1.0637 -2.7064 6 6 2.9906 3.0613 -1.2003 7 6 3.3096 3.6746 -0.0028 8 6 2.9953 3.0598 1.1973 9 9 3.3084 3.6607 2.3660 10 6 2.3613 1.8295 1.2000 11 6 2.0197 1.1600 2.5062 12 1 1.3058 0.3561 2.3265 13 7 1.4278 2.1450 3.4212 14 6 3.2720 0.5914 3.1219 15 1 4.2351 1.0124 2.8735 16 6 3.1884 -0.4664 4.0024 17 7 2.0129 -0.9510 4.3383 18 14 4.7449 -1.2110 4.7183 19 1 5.2210 -2.3061 3.8355 20 1 5.7936 -0.1644 4.8184 21 1 4.4572 -1.7544 6.0700 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3632 0.5139 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 3.2368 3.5427 -2.1353 26 1 3.8046 4.6344 -0.0037 27 1 1.0818 1.6994 4.2577 28 1 2.0895 2.8727 3.6464 29 1 1.2027 -0.5145 4.0316 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260553916.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:54:31 Heat of formation + Delta-G solvation = -67.962708 kcal Electronic energy + Delta-G solvation = -17694.221196 eV Core-core repulsion = 14557.923191 eV Total energy + Delta-G solvation = -3136.298004 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.44045 -39.67633 -36.86857 -36.27363 -35.00101 -31.64100 -29.78980 -29.47461 -26.61989 -25.52795 -23.28109 -22.13988 -20.74890 -17.88990 -17.25899 -16.90872 -15.90646 -15.56816 -15.32400 -14.82198 -14.47059 -14.21250 -13.83528 -13.11942 -12.98165 -12.78706 -12.60152 -12.43052 -11.94912 -11.67869 -11.36571 -10.89357 -10.83431 -10.78940 -10.21194 -9.91856 -9.58773 -9.53782 -8.69118 -8.39161 -8.14803 -7.37722 -6.49982 -4.28294 1.22168 1.45221 2.30981 3.38159 3.39551 3.55927 3.58346 4.08204 4.42874 4.67774 5.00920 5.16816 5.23918 5.44561 5.57635 5.66108 5.70951 5.91410 5.95493 6.19735 6.26548 6.39909 6.51222 6.90969 7.21646 7.76616 7.82944 8.18281 8.37072 8.62630 8.68351 9.42962 10.84042 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.021552 B = 0.008207 C = 0.007193 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1298.875802 B = 3411.083404 C = 3891.825190 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.314 6.314 3 C 0.125 3.875 4 C -0.066 4.066 5 Cl -0.069 7.069 6 C -0.098 4.098 7 C -0.154 4.154 8 C 0.121 3.879 9 F -0.124 7.124 10 C -0.061 4.061 11 C 0.226 3.774 12 H 0.066 0.934 13 N -0.863 5.863 14 C -0.618 4.618 15 H 0.050 0.950 16 C 0.032 3.968 17 N -0.901 5.901 18 Si 1.070 2.930 19 H -0.285 1.285 20 H -0.288 1.288 21 H -0.283 1.283 22 H 0.093 0.907 23 H 0.052 0.948 24 H 0.042 0.958 25 H 0.139 0.861 26 H 0.139 0.861 27 H 0.333 0.667 28 H 0.330 0.670 29 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.941 6.474 -9.941 11.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.230 6.230 3 C 0.080 3.920 4 C -0.094 4.094 5 Cl -0.040 7.040 6 C -0.117 4.117 7 C -0.173 4.173 8 C 0.101 3.899 9 F -0.103 7.103 10 C -0.063 4.063 11 C 0.117 3.883 12 H 0.084 0.916 13 N -0.394 5.394 14 C -0.658 4.658 15 H 0.068 0.932 16 C -0.174 4.174 17 N -0.537 5.537 18 Si 0.898 3.102 19 H -0.211 1.211 20 H -0.214 1.214 21 H -0.209 1.209 22 H 0.112 0.888 23 H 0.070 0.930 24 H 0.061 0.939 25 H 0.157 0.843 26 H 0.157 0.843 27 H 0.145 0.855 28 H 0.145 0.855 29 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges -0.869 5.164 -9.658 10.986 hybrid contribution 0.197 1.092 -0.343 1.161 sum -0.671 6.256 -10.001 11.816 Atomic orbital electron populations 1.22983 0.78979 1.03230 1.00573 1.86114 1.19693 1.23315 1.93926 1.17894 0.97820 0.86881 0.89426 1.21278 1.06202 0.95423 0.86454 1.98329 1.92801 1.81518 1.31323 1.20515 0.99510 0.93385 0.98290 1.20991 1.04019 1.01672 0.90625 1.17340 0.99157 0.92159 0.81230 1.91374 1.90373 1.82554 1.45964 1.20693 0.96106 0.92042 0.97461 1.18094 0.95533 0.89923 0.84764 0.91625 1.59670 1.43084 1.16494 1.20178 1.22450 0.93311 1.21118 1.28907 0.93204 1.25875 1.03253 0.93878 0.94414 1.70795 0.98089 1.40703 1.44084 0.83534 0.74058 0.76012 0.76643 1.21127 1.21384 1.20897 0.88839 0.92964 0.93915 0.84342 0.84328 0.85533 0.85527 0.91832 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.60 10.74 101.05 1.08 1.69 15 2 O -0.31 -6.46 8.90 -19.47 -0.17 -6.63 15 3 C 0.13 2.54 5.69 -39.20 -0.22 2.32 15 4 C -0.07 -1.13 6.33 -39.36 -0.25 -1.38 15 5 Cl -0.07 -1.03 28.50 -51.86 -1.48 -2.50 15 6 C -0.10 -1.45 9.82 -39.58 -0.39 -1.84 15 7 C -0.15 -2.42 10.02 -39.49 -0.40 -2.82 15 8 C 0.12 2.39 7.01 -39.44 -0.28 2.12 15 9 F -0.12 -2.53 14.37 2.25 0.03 -2.50 15 10 C -0.06 -1.33 4.94 -104.41 -0.52 -1.85 15 11 C 0.23 5.57 2.38 -70.02 -0.17 5.40 15 12 H 0.07 1.74 5.12 -51.93 -0.27 1.47 15 13 N -0.86 -19.77 9.05 -6.66 -0.06 -19.83 15 14 C -0.62 -16.96 8.49 -34.44 -0.29 -17.25 15 15 H 0.05 1.41 7.81 -52.48 -0.41 1.00 15 16 C 0.03 0.89 5.46 -17.82 -0.10 0.79 15 17 N -0.90 -25.96 13.58 55.43 0.75 -25.20 15 18 Si 1.07 24.95 29.90 -169.99 -5.08 19.87 15 19 H -0.28 -6.51 7.11 56.52 0.40 -6.11 15 20 H -0.29 -6.47 7.11 56.52 0.40 -6.07 15 21 H -0.28 -6.54 7.11 56.52 0.40 -6.13 15 22 H 0.09 1.34 8.14 -51.93 -0.42 0.92 15 23 H 0.05 0.90 7.62 -51.93 -0.40 0.50 15 24 H 0.04 0.61 8.14 -51.93 -0.42 0.19 15 25 H 0.14 1.58 8.06 -52.49 -0.42 1.16 15 26 H 0.14 1.72 8.06 -52.49 -0.42 1.30 15 27 H 0.33 7.78 8.52 -39.29 -0.33 7.44 15 28 H 0.33 7.44 6.24 -39.29 -0.25 7.20 15 29 H 0.27 7.69 6.30 -40.82 -0.26 7.43 15 LS Contribution 270.51 15.07 4.08 4.08 Total: -1.00 -29.39 270.51 -5.85 -35.24 By element: Atomic # 1 Polarization: 12.71 SS G_CDS: -2.39 Total: 10.31 kcal Atomic # 6 Polarization: -11.32 SS G_CDS: -1.52 Total: -12.84 kcal Atomic # 7 Polarization: -45.73 SS G_CDS: 0.69 Total: -45.03 kcal Atomic # 8 Polarization: -6.46 SS G_CDS: -0.17 Total: -6.63 kcal Atomic # 9 Polarization: -2.53 SS G_CDS: 0.03 Total: -2.50 kcal Atomic # 14 Polarization: 24.95 SS G_CDS: -5.08 Total: 19.87 kcal Atomic # 17 Polarization: -1.03 SS G_CDS: -1.48 Total: -2.50 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -29.39 -5.85 -35.24 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260553916.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.720 kcal (2) G-P(sol) polarization free energy of solvation -29.394 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.114 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.849 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.243 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.963 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds