Wall clock time and date at job start Mon Mar 30 2020 06:57:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35976 * 117.00076 * 2 1 4 4 C 1.38655 * 120.04982 * 359.97438 * 3 2 1 5 5 C 1.38175 * 119.98326 * 179.97438 * 4 3 2 6 6 C 1.38363 * 120.08218 * 0.02562 * 5 4 3 7 7 Cl 1.73608 * 119.95107 * 179.97438 * 6 5 4 8 8 C 1.38353 * 120.09954 * 359.97438 * 6 5 4 9 9 C 1.50708 * 119.99172 * 180.02562 * 8 6 5 10 10 H 1.08998 * 109.46846 * 13.70076 * 9 8 6 11 11 N 1.46900 * 109.47098 * 133.69980 * 9 8 6 12 12 C 1.50700 * 109.47217 * 253.70185 * 9 8 6 13 13 H 1.07997 * 119.99704 * 0.02562 * 12 9 8 14 14 C 1.37877 * 119.99962 * 180.02562 * 12 9 8 15 15 N 1.31517 * 119.99944 * 359.97438 * 14 12 9 16 16 Si 1.86798 * 119.99757 * 180.02562 * 14 12 9 17 17 H 1.48507 * 109.46911 * 180.02562 * 16 14 12 18 18 H 1.48497 * 109.47261 * 299.99592 * 16 14 12 19 19 H 1.48498 * 109.47489 * 59.99974 * 16 14 12 20 20 C 1.38329 * 120.01790 * 0.27544 * 8 6 5 21 21 F 1.35099 * 120.04050 * 179.71061 * 20 8 6 22 22 H 1.09004 * 109.47252 * 180.02562 * 1 2 3 23 23 H 1.08997 * 109.47734 * 300.00642 * 1 2 3 24 24 H 1.09002 * 109.46602 * 60.00755 * 1 2 3 25 25 H 1.07995 * 120.00818 * 359.97438 * 4 3 2 26 26 H 1.08000 * 119.96134 * 180.02562 * 5 4 3 27 27 H 1.00901 * 111.00100 * 306.77607 * 11 9 8 28 28 H 1.00900 * 110.99652 * 70.73117 * 11 9 8 29 29 H 0.96994 * 119.99849 * 0.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 1.2922 2.3751 -0.0005 5 6 1.9209 3.6055 0.0000 6 6 3.3026 3.6782 0.0005 7 17 4.0891 5.2260 0.0005 8 6 4.0585 2.5194 0.0011 9 6 5.5633 2.6015 0.0022 10 1 5.8715 3.6182 0.2459 11 7 6.1036 1.6727 1.0039 12 6 6.0877 2.2308 -1.3611 13 1 5.4000 1.9630 -2.1496 14 6 7.4453 2.2336 -1.6017 15 7 8.2826 2.5602 -0.6415 16 14 8.0952 1.7747 -3.2918 17 1 9.5781 1.8543 -3.2902 18 1 7.6747 0.3900 -3.6246 19 1 7.5496 2.7145 -4.3039 20 6 3.4333 1.2855 -0.0047 21 9 4.1710 0.1536 -0.0101 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3634 0.5139 0.8899 24 1 -0.3632 0.5137 -0.8901 25 1 0.2136 2.3197 -0.0014 26 1 1.3332 4.5115 0.0000 27 1 5.6825 1.8301 1.9073 28 1 5.9832 0.7148 0.7108 29 1 7.9451 2.7988 0.2359 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260558751.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:57:16 Heat of formation + Delta-G solvation = -63.305759 kcal Electronic energy + Delta-G solvation = -17515.715277 eV Core-core repulsion = 14379.619213 eV Total energy + Delta-G solvation = -3136.096064 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.052 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -48.31029 -39.88243 -37.83084 -35.80712 -34.75602 -31.48122 -30.00441 -29.41667 -27.26167 -25.55877 -23.05486 -22.19449 -20.67132 -17.99044 -17.20567 -16.96813 -16.37704 -15.97741 -14.92042 -14.74794 -14.66440 -14.06891 -14.03188 -13.58219 -13.18041 -12.84982 -12.56733 -12.32509 -11.75775 -11.58218 -11.41664 -11.13298 -10.77541 -10.68445 -10.43881 -10.11386 -9.99383 -8.93016 -8.31743 -8.17382 -7.89038 -7.50543 -6.17145 -3.99968 1.31698 1.38502 2.53301 3.19401 3.50912 3.53137 3.69395 3.71759 4.50785 4.63132 4.76569 4.98529 5.02711 5.18547 5.29915 5.34427 5.49336 5.77696 5.90940 6.11794 6.15146 6.18213 6.40012 6.78962 7.22980 7.35769 7.91400 8.28589 8.64803 8.79890 9.06462 9.82037 11.23813 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.020093 B = 0.008509 C = 0.006899 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1393.157311 B = 3289.774769 C = 4057.454249 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.309 6.309 3 C 0.091 3.909 4 C -0.195 4.195 5 C -0.086 4.086 6 C -0.048 4.048 7 Cl -0.056 7.056 8 C -0.061 4.061 9 C 0.235 3.765 10 H 0.063 0.937 11 N -0.833 5.833 12 C -0.608 4.608 13 H 0.046 0.954 14 C 0.041 3.959 15 N -0.888 5.888 16 Si 1.064 2.936 17 H -0.283 1.283 18 H -0.289 1.289 19 H -0.289 1.289 20 C 0.084 3.916 21 F -0.118 7.118 22 H 0.099 0.901 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.138 0.862 26 H 0.135 0.865 27 H 0.300 0.700 28 H 0.338 0.662 29 H 0.292 0.708 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.863 -0.058 2.412 16.045 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.223 6.223 3 C 0.045 3.955 4 C -0.214 4.214 5 C -0.105 4.105 6 C -0.076 4.076 7 Cl -0.027 7.027 8 C -0.065 4.065 9 C 0.126 3.874 10 H 0.080 0.920 11 N -0.362 5.362 12 C -0.647 4.647 13 H 0.064 0.936 14 C -0.169 4.169 15 N -0.522 5.522 16 Si 0.892 3.108 17 H -0.208 1.208 18 H -0.216 1.216 19 H -0.216 1.216 20 C 0.064 3.936 21 F -0.096 7.096 22 H 0.118 0.882 23 H 0.073 0.927 24 H 0.074 0.926 25 H 0.156 0.844 26 H 0.153 0.847 27 H 0.111 0.889 28 H 0.154 0.846 29 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -13.544 -0.003 1.410 13.617 hybrid contribution -2.711 -0.127 0.868 2.850 sum -16.255 -0.130 2.278 16.415 Atomic orbital electron populations 1.23064 0.78495 1.03911 1.01284 1.86148 1.21262 1.25967 1.88916 1.19078 0.90840 0.85419 1.00128 1.20803 0.99759 0.90882 1.09954 1.20781 0.92362 0.97816 0.99517 1.20442 0.91855 0.87132 1.08129 1.98344 1.81012 1.26433 1.96952 1.21477 1.02460 0.88889 0.93703 1.18626 0.79745 0.95430 0.93639 0.91969 1.59502 1.63684 1.09448 1.03609 1.21582 0.94493 1.54390 0.94186 0.93606 1.25599 0.92990 0.93944 1.04392 1.70543 1.38121 1.38432 1.05086 0.83648 0.76169 0.76324 0.74620 1.20809 1.21561 1.21599 1.16562 0.85111 0.82943 1.09032 1.91434 1.76133 1.48072 1.93991 0.88215 0.92670 0.92594 0.84412 0.84747 0.88946 0.84619 0.89563 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.27 9.81 101.05 0.99 1.26 15 2 O -0.31 -4.82 10.36 -19.66 -0.20 -5.03 15 3 C 0.09 1.57 6.69 -39.18 -0.26 1.31 15 4 C -0.19 -2.77 9.04 -39.45 -0.36 -3.12 15 5 C -0.09 -1.29 9.82 -39.56 -0.39 -1.68 15 6 C -0.05 -0.90 6.31 -39.49 -0.25 -1.15 15 7 Cl -0.06 -1.03 27.06 -51.86 -1.40 -2.43 15 8 C -0.06 -1.32 4.79 -104.54 -0.50 -1.82 15 9 C 0.23 5.86 2.22 -70.01 -0.16 5.71 15 10 H 0.06 1.64 6.20 -51.93 -0.32 1.32 15 11 N -0.83 -20.04 7.63 -6.65 -0.05 -20.09 15 12 C -0.61 -17.14 8.44 -34.44 -0.29 -17.43 15 13 H 0.05 1.32 7.74 -52.49 -0.41 0.92 15 14 C 0.04 1.18 5.39 -17.82 -0.10 1.09 15 15 N -0.89 -26.96 13.51 55.43 0.75 -26.21 15 16 Si 1.06 25.73 29.90 -169.99 -5.08 20.64 15 17 H -0.28 -6.83 7.11 56.52 0.40 -6.43 15 18 H -0.29 -6.79 7.11 56.52 0.40 -6.38 15 19 H -0.29 -6.71 7.11 56.52 0.40 -6.31 15 20 C 0.08 1.74 7.00 -39.30 -0.27 1.46 15 21 F -0.12 -2.63 14.37 2.25 0.03 -2.60 15 22 H 0.10 0.74 8.14 -51.93 -0.42 0.32 15 23 H 0.05 0.45 7.66 -51.93 -0.40 0.05 15 24 H 0.06 0.47 7.66 -51.93 -0.40 0.08 15 25 H 0.14 1.43 6.30 -52.49 -0.33 1.10 15 26 H 0.13 1.60 8.06 -52.49 -0.42 1.18 15 27 H 0.30 6.40 8.95 -39.29 -0.35 6.05 15 28 H 0.34 8.29 6.58 -39.29 -0.26 8.04 15 29 H 0.29 8.88 6.39 -40.82 -0.26 8.61 15 LS Contribution 267.33 15.07 4.03 4.03 Total: -1.00 -31.65 267.33 -5.88 -37.53 By element: Atomic # 1 Polarization: 10.90 SS G_CDS: -2.37 Total: 8.53 kcal Atomic # 6 Polarization: -12.79 SS G_CDS: -1.58 Total: -14.37 kcal Atomic # 7 Polarization: -47.00 SS G_CDS: 0.70 Total: -46.30 kcal Atomic # 8 Polarization: -4.82 SS G_CDS: -0.20 Total: -5.03 kcal Atomic # 9 Polarization: -2.63 SS G_CDS: 0.03 Total: -2.60 kcal Atomic # 14 Polarization: 25.73 SS G_CDS: -5.08 Total: 20.64 kcal Atomic # 17 Polarization: -1.03 SS G_CDS: -1.40 Total: -2.43 kcal Total LS contribution 4.03 Total: 4.03 kcal Total: -31.65 -5.88 -37.53 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260558751.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.773 kcal (2) G-P(sol) polarization free energy of solvation -31.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.532 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.306 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds