Wall clock time and date at job start Mon Mar 30 2020 06:08:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.39426 * 120.61543 * 147.44198 * 3 2 1 5 5 C 1.38342 * 119.88892 * 179.97438 * 4 3 2 6 6 F 1.35101 * 119.38586 * 180.02562 * 5 4 3 7 7 C 1.39016 * 121.22367 * 0.02562 * 5 4 3 8 8 C 1.50694 * 119.34918 * 179.97438 * 7 5 4 9 9 F 1.39894 * 109.47437 * 180.02562 * 8 7 5 10 10 F 1.39905 * 109.47385 * 300.02551 * 8 7 5 11 11 F 1.39906 * 109.47108 * 60.02162 * 8 7 5 12 12 C 1.36312 * 121.30101 * 0.02562 * 7 5 4 13 13 C 1.40899 * 120.00007 * 359.97438 * 12 7 5 14 14 C 1.40702 * 120.58976 * 179.97438 * 13 12 7 15 15 H 1.07999 * 119.99824 * 150.00704 * 14 13 12 16 16 C 1.40240 * 120.00109 * 330.01220 * 14 13 12 17 17 N 1.30662 * 119.99927 * 161.96285 * 16 14 13 18 18 Si 1.86795 * 119.99801 * 341.96949 * 16 14 13 19 19 H 1.48502 * 109.47559 * 95.40384 * 18 16 14 20 20 H 1.48505 * 109.46990 * 215.40233 * 18 16 14 21 21 H 1.48502 * 109.47601 * 335.39893 * 18 16 14 22 22 H 1.07999 * 120.05315 * 0.02562 * 4 3 2 23 23 H 1.08001 * 120.00253 * 179.72168 * 12 7 5 24 24 H 0.97003 * 120.00116 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2776 1.0123 -0.6457 5 6 4.6609 0.9984 -0.6358 6 9 5.3383 1.9840 -1.2643 7 6 5.3669 -0.0108 0.0088 8 6 6.8735 0.0153 -0.0075 9 9 7.3667 -1.0883 0.6967 10 9 7.3266 -0.0350 -1.3301 11 9 7.3260 1.1936 0.5959 12 6 4.7231 -1.0242 0.6544 13 6 3.3149 -1.0624 0.6777 14 6 2.6377 -2.1029 1.3399 15 1 1.6674 -1.9224 1.7786 16 6 3.2226 -3.3742 1.4304 17 7 2.7913 -4.2301 2.3186 18 14 4.6184 -3.8440 0.2814 19 1 5.9186 -3.5969 0.9549 20 1 4.5081 -5.2829 -0.0690 21 1 4.5382 -3.0260 -0.9554 22 1 2.7482 1.8059 -1.1521 23 1 5.2925 -1.8001 1.1446 24 1 3.1962 -5.1094 2.3815 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575644838.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:08:28 Heat of formation + Delta-G solvation = -158.146308 kcal Electronic energy + Delta-G solvation = -18982.672573 eV Core-core repulsion = 15167.206929 eV Total energy + Delta-G solvation = -3815.465644 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 259.031 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -49.78730 -48.06051 -47.22946 -47.19923 -38.28789 -35.51782 -34.31673 -31.54070 -30.87746 -25.97075 -25.73267 -22.47038 -21.63478 -18.62301 -18.36795 -18.09895 -18.00395 -17.16240 -15.80841 -15.36239 -14.84473 -14.74054 -14.11877 -14.05174 -13.85955 -13.66574 -13.61157 -13.39054 -13.33754 -12.97001 -12.85241 -12.61814 -12.12662 -12.01132 -11.69028 -11.30131 -11.13811 -10.78942 -10.61588 -10.24730 -9.70615 -8.58607 -8.09740 -7.62067 -5.13879 1.21702 1.96027 2.75792 2.85366 2.92865 3.08908 3.37536 3.51833 3.54251 4.07700 4.15035 4.46807 4.66275 4.77254 4.91575 5.17639 5.45724 5.93594 5.96558 6.33136 6.46992 6.58401 6.68585 7.00708 7.31550 7.60021 7.82618 8.00350 8.41821 9.34919 Molecular weight = 259.03amu Principal moments of inertia in cm(-1) A = 0.017660 B = 0.011360 C = 0.007566 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1585.114402 B = 2464.283657 C = 3699.982722 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.476 5.476 2 C 0.294 3.706 3 C -0.132 4.132 4 C -0.035 4.035 5 C -0.024 4.024 6 F -0.153 7.153 7 C -0.134 4.134 8 C 0.504 3.496 9 F -0.180 7.180 10 F -0.178 7.178 11 F -0.178 7.178 12 C -0.164 4.164 13 C 0.107 3.893 14 C -0.385 4.385 15 H 0.107 0.893 16 C 0.079 3.921 17 N -0.752 5.752 18 Si 0.896 3.104 19 H -0.251 1.251 20 H -0.274 1.274 21 H -0.233 1.233 22 H 0.128 0.872 23 H 0.132 0.868 24 H 0.301 0.699 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.467 2.161 -2.777 8.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.154 5.154 2 C -0.018 4.018 3 C -0.138 4.138 4 C -0.056 4.056 5 C -0.044 4.044 6 F -0.132 7.132 7 C -0.137 4.137 8 C 0.449 3.551 9 F -0.161 7.161 10 F -0.160 7.160 11 F -0.159 7.159 12 C -0.183 4.183 13 C 0.101 3.899 14 C -0.410 4.410 15 H 0.125 0.875 16 C -0.148 4.148 17 N -0.371 5.371 18 Si 0.719 3.281 19 H -0.176 1.176 20 H -0.200 1.200 21 H -0.155 1.155 22 H 0.146 0.854 23 H 0.150 0.850 24 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 5.705 1.922 -2.620 6.565 hybrid contribution 1.386 -0.240 -0.331 1.445 sum 7.091 1.682 -2.950 7.863 Atomic orbital electron populations 1.81090 1.12306 1.10277 1.11723 1.25323 0.92231 0.92018 0.92182 1.16522 0.83881 1.02652 1.10740 1.20496 0.91191 0.97039 0.96922 1.16180 0.89248 0.90993 1.08002 1.91398 1.80186 1.60348 1.81250 1.19387 0.89410 0.99776 1.05127 1.18488 0.89547 0.73412 0.73606 1.93147 1.89557 1.54231 1.79164 1.93186 1.90838 1.96073 1.35859 1.93188 1.90872 1.48277 1.83557 1.20568 0.94611 0.99007 1.04162 1.18326 0.89889 0.91978 0.89743 1.19782 1.05035 0.92701 1.23443 0.87502 1.26470 0.97605 0.96064 0.94674 1.69559 1.35617 1.07214 1.24736 0.86479 0.80021 0.78986 0.82600 1.17595 1.19979 1.15536 0.85400 0.85042 0.88778 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -10.43 18.54 41.84 0.78 -9.65 14 2 C 0.29 6.14 14.38 -22.47 -0.32 5.81 14 3 C -0.13 -2.67 5.94 -104.19 -0.62 -3.29 14 4 C -0.03 -0.64 9.74 -39.10 -0.38 -1.02 14 5 C -0.02 -0.46 7.10 -39.25 -0.28 -0.73 14 6 F -0.15 -2.87 16.28 2.25 0.04 -2.84 14 7 C -0.13 -2.62 5.34 -105.03 -0.56 -3.18 14 8 C 0.50 9.21 3.00 36.00 0.11 9.32 14 9 F -0.18 -3.22 15.88 2.25 0.04 -3.18 14 10 F -0.18 -3.20 16.98 2.25 0.04 -3.16 14 11 F -0.18 -3.16 16.99 2.25 0.04 -3.13 14 12 C -0.16 -3.34 6.51 -39.27 -0.26 -3.59 14 13 C 0.11 2.28 5.26 -104.62 -0.55 1.73 14 14 C -0.38 -8.73 9.03 -37.90 -0.34 -9.07 14 15 H 0.11 2.61 7.66 -52.49 -0.40 2.21 14 16 C 0.08 1.73 5.41 -17.30 -0.09 1.63 14 17 N -0.75 -16.74 13.92 55.56 0.77 -15.97 14 18 Si 0.90 17.10 24.53 -169.99 -4.17 12.93 14 19 H -0.25 -4.62 6.72 56.52 0.38 -4.24 14 20 H -0.27 -5.02 7.11 56.52 0.40 -4.61 14 21 H -0.23 -4.53 6.86 56.52 0.39 -4.14 14 22 H 0.13 2.00 8.06 -52.49 -0.42 1.58 14 23 H 0.13 2.62 3.74 -52.49 -0.20 2.42 14 24 H 0.30 5.92 8.29 -40.82 -0.34 5.58 14 LS Contribution 243.26 15.07 3.67 3.67 Total: -1.00 -22.63 243.26 -2.29 -24.93 By element: Atomic # 1 Polarization: -1.01 SS G_CDS: -0.19 Total: -1.20 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -3.30 Total: -2.40 kcal Atomic # 7 Polarization: -27.17 SS G_CDS: 1.55 Total: -25.62 kcal Atomic # 9 Polarization: -12.45 SS G_CDS: 0.15 Total: -12.30 kcal Atomic # 14 Polarization: 17.10 SS G_CDS: -4.17 Total: 12.93 kcal Total LS contribution 3.67 Total: 3.67 kcal Total: -22.63 -2.29 -24.93 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575644838.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.220 kcal (2) G-P(sol) polarization free energy of solvation -22.633 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -155.853 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.293 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.926 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.146 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds