Wall clock time and date at job start Mon Mar 30 2020 06:08:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.39455 * 120.05347 * 102.28038 * 3 2 1 5 5 F 1.35095 * 120.24764 * 359.94903 * 4 3 2 6 6 C 1.40820 * 119.50590 * 179.69968 * 4 3 2 7 7 C 1.41315 * 120.19688 * 180.29111 * 6 4 3 8 8 H 1.07994 * 119.99577 * 24.92603 * 7 6 4 9 9 C 1.39938 * 120.00003 * 204.93289 * 7 6 4 10 10 N 1.30847 * 120.00126 * 17.81583 * 9 7 6 11 11 Si 1.86795 * 120.00078 * 197.81435 * 9 7 6 12 12 H 1.48506 * 109.46903 * 59.99772 * 11 9 7 13 13 H 1.48498 * 109.47565 * 179.97438 * 11 9 7 14 14 H 1.48503 * 109.47295 * 300.00415 * 11 9 7 15 15 C 1.40758 * 119.60845 * 0.54461 * 6 4 3 16 16 C 1.37702 * 120.09677 * 359.44853 * 15 6 4 17 17 C 1.38380 * 120.50255 * 0.27965 * 16 15 6 18 18 C 1.50697 * 119.80380 * 180.02562 * 17 16 15 19 19 F 1.39903 * 109.47221 * 359.97438 * 18 17 16 20 20 F 1.39897 * 109.47128 * 119.99750 * 18 17 16 21 21 F 1.39905 * 109.47047 * 240.00039 * 18 17 16 22 22 H 0.96994 * 119.99986 * 180.02562 * 10 9 7 23 23 H 1.07997 * 119.95075 * 179.72724 * 15 6 4 24 24 H 1.07994 * 119.74894 * 180.25199 * 16 15 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2663 0.2577 -1.1794 5 9 2.5968 0.5060 -2.3263 6 6 4.6744 0.2617 -1.1649 7 6 5.3967 0.5265 -2.3504 8 1 4.9416 1.1023 -3.1426 9 6 6.7014 0.0425 -2.4976 10 7 7.1314 -0.9242 -1.7278 11 14 7.8292 0.7765 -3.7932 12 1 8.0121 2.2259 -3.5266 13 1 9.1475 0.0947 -3.7457 14 1 7.2246 0.5930 -5.1372 15 6 5.3583 -0.0048 0.0361 16 6 4.6525 -0.2565 1.1914 17 6 3.2687 -0.2560 1.1833 18 6 2.5121 -0.5329 2.4568 19 9 3.4187 -0.7586 3.4982 20 9 1.7067 0.5675 2.7694 21 9 1.7086 -1.6652 2.2851 22 1 8.0359 -1.2593 -1.8296 23 1 6.4381 -0.0075 0.0526 24 1 5.1829 -0.4564 2.1106 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575645987.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:08:58 Heat of formation + Delta-G solvation = -160.387714 kcal Electronic energy + Delta-G solvation = -18773.722556 eV Core-core repulsion = 14958.159718 eV Total energy + Delta-G solvation = -3815.562839 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 259.031 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -49.54578 -47.81186 -47.08950 -46.99955 -38.14182 -35.96196 -34.34742 -31.01201 -30.00150 -27.22358 -24.33932 -22.74234 -21.16471 -19.03728 -17.87743 -17.86765 -17.77469 -16.51028 -15.84713 -15.47162 -14.76965 -14.67617 -14.02618 -13.94977 -13.76476 -13.50007 -13.23339 -13.21137 -12.97226 -12.76834 -12.64552 -12.54814 -12.22346 -11.82039 -11.55589 -11.39638 -11.12129 -10.83316 -10.43705 -10.22908 -9.70251 -8.22620 -7.95997 -7.36845 -4.99774 1.48402 2.08113 2.79445 2.82318 2.85295 3.16705 3.36137 3.54224 3.62051 4.05561 4.38759 4.55473 4.72598 4.80844 5.17295 5.39389 5.86930 6.18240 6.39675 6.57402 6.66394 6.85744 7.16733 7.37627 7.44173 7.92881 7.98052 8.12909 8.17264 9.54931 Molecular weight = 259.03amu Principal moments of inertia in cm(-1) A = 0.029537 B = 0.007066 C = 0.005997 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 947.742889 B = 3961.540046 C = 4668.133916 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.430 5.430 2 C 0.261 3.739 3 C 0.012 3.988 4 C 0.031 3.969 5 F -0.143 7.143 6 C 0.095 3.905 7 C -0.418 4.418 8 H 0.096 0.904 9 C 0.072 3.928 10 N -0.760 5.760 11 Si 0.923 3.077 12 H -0.257 1.257 13 H -0.272 1.272 14 H -0.259 1.259 15 C -0.138 4.138 16 C -0.056 4.056 17 C -0.267 4.267 18 C 0.515 3.485 19 F -0.184 7.184 20 F -0.189 7.189 21 F -0.188 7.188 22 H 0.295 0.705 23 H 0.140 0.860 24 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.795 0.915 2.618 3.937 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.105 5.105 2 C -0.054 4.054 3 C 0.008 3.992 4 C 0.007 3.993 5 F -0.122 7.122 6 C 0.091 3.909 7 C -0.444 4.444 8 H 0.114 0.886 9 C -0.151 4.151 10 N -0.381 5.381 11 Si 0.746 3.254 12 H -0.181 1.181 13 H -0.197 1.197 14 H -0.183 1.183 15 C -0.157 4.157 16 C -0.075 4.075 17 C -0.272 4.272 18 C 0.461 3.539 19 F -0.165 7.165 20 F -0.170 7.170 21 F -0.170 7.170 22 H 0.106 0.894 23 H 0.158 0.842 24 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 1.199 0.740 2.646 2.997 hybrid contribution 0.675 0.116 -0.470 0.831 sum 1.874 0.856 2.175 2.996 Atomic orbital electron populations 1.81058 1.12059 1.09605 1.07826 1.25808 0.92934 0.93265 0.93372 1.15202 0.83121 1.07191 0.93723 1.17603 0.89985 1.11734 0.79937 1.91362 1.80445 1.92324 1.48081 1.17641 0.88073 0.90367 0.94839 1.19814 0.97169 1.26362 1.01085 0.88609 1.26116 0.98548 0.93036 0.97438 1.69753 1.18779 1.16523 1.33087 0.86068 0.78318 0.80540 0.80486 1.18084 1.19691 1.18321 1.21246 1.00456 1.04396 0.89647 1.20422 0.90760 0.97395 0.98891 1.18733 0.94219 1.24485 0.89781 1.18324 0.77010 0.73726 0.84819 1.93092 1.67402 1.94665 1.61385 1.93164 1.75230 1.54533 1.94077 1.93170 1.75331 1.52916 1.95573 0.89360 0.84235 0.86171 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -9.50 18.54 41.84 0.78 -8.72 14 2 C 0.26 5.68 12.77 -22.47 -0.29 5.39 14 3 C 0.01 0.27 5.71 -106.90 -0.61 -0.34 14 4 C 0.03 0.69 7.28 -38.15 -0.28 0.41 14 5 F -0.14 -3.24 16.26 2.25 0.04 -3.20 14 6 C 0.10 2.14 5.57 -106.80 -0.60 1.54 14 7 C -0.42 -9.26 8.78 -37.78 -0.33 -9.60 14 8 H 0.10 2.07 7.74 -52.49 -0.41 1.66 14 9 C 0.07 1.47 5.13 -17.33 -0.09 1.38 14 10 N -0.76 -15.86 10.96 55.55 0.61 -15.25 14 11 Si 0.92 15.39 29.59 -169.99 -5.03 10.35 14 12 H -0.26 -4.27 7.11 56.52 0.40 -3.86 14 13 H -0.27 -4.40 7.11 56.52 0.40 -4.00 14 14 H -0.26 -4.37 7.11 56.52 0.40 -3.97 14 15 C -0.14 -2.88 8.69 -38.83 -0.34 -3.21 14 16 C -0.06 -1.08 9.39 -39.72 -0.37 -1.45 14 17 C -0.27 -5.40 5.42 -103.95 -0.56 -5.97 14 18 C 0.51 9.84 2.88 36.00 0.10 9.95 14 19 F -0.18 -3.23 15.95 2.25 0.04 -3.19 14 20 F -0.19 -3.65 16.50 2.25 0.04 -3.62 14 21 F -0.19 -3.71 16.51 2.25 0.04 -3.67 14 22 H 0.29 5.50 8.30 -40.82 -0.34 5.16 14 23 H 0.14 2.89 6.15 -52.49 -0.32 2.57 14 24 H 0.12 2.03 7.12 -52.49 -0.37 1.66 14 LS Contribution 246.57 15.07 3.72 3.72 Total: -1.00 -22.89 246.57 -3.38 -26.27 By element: Atomic # 1 Polarization: -0.54 SS G_CDS: -0.24 Total: -0.78 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -3.36 Total: -1.90 kcal Atomic # 7 Polarization: -25.36 SS G_CDS: 1.38 Total: -23.97 kcal Atomic # 9 Polarization: -13.83 SS G_CDS: 0.15 Total: -13.68 kcal Atomic # 14 Polarization: 15.39 SS G_CDS: -5.03 Total: 10.35 kcal Total LS contribution 3.72 Total: 3.72 kcal Total: -22.89 -3.38 -26.27 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575645987.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.120 kcal (2) G-P(sol) polarization free energy of solvation -22.886 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.006 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.382 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.268 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.388 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds