Wall clock time and date at job start Mon Mar 30 2020 06:08:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13608 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.39077 * 119.99691 * 73.30812 * 3 2 1 5 5 C 1.40415 * 119.61806 * 179.97438 * 4 3 2 6 6 C 1.41349 * 120.19782 * 180.02562 * 5 4 3 7 7 H 1.07996 * 120.00280 * 154.65383 * 6 5 4 8 8 C 1.39922 * 119.99540 * 334.65214 * 6 5 4 9 9 N 1.30848 * 120.00422 * 342.90897 * 8 6 5 10 10 Si 1.86800 * 119.99861 * 162.90717 * 8 6 5 11 11 H 1.48498 * 109.47088 * 90.00145 * 10 8 6 12 12 H 1.48496 * 109.47430 * 210.00050 * 10 8 6 13 13 H 1.48506 * 109.47283 * 330.00227 * 10 8 6 14 14 C 1.41098 * 119.61234 * 359.97438 * 5 4 3 15 15 F 1.35100 * 120.00940 * 179.97438 * 14 5 4 16 16 C 1.38098 * 119.98471 * 359.97438 * 14 5 4 17 17 C 1.50700 * 119.81078 * 179.97438 * 16 14 5 18 18 F 1.39897 * 109.47057 * 180.02562 * 17 16 14 19 19 F 1.39898 * 109.46743 * 60.00312 * 17 16 14 20 20 F 1.39894 * 109.46942 * 300.00572 * 17 16 14 21 21 C 1.38167 * 120.38384 * 0.27822 * 16 14 5 22 22 H 1.08007 * 120.19056 * 0.02562 * 4 3 2 23 23 H 0.97001 * 120.00569 * 179.97438 * 9 8 6 24 24 H 1.07994 * 119.80468 * 179.72625 * 21 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2636 -0.3450 -1.1537 5 6 4.6677 -0.3412 -1.1450 6 6 5.3869 -0.6899 -2.3108 7 1 6.3889 -0.3156 -2.4593 8 6 4.8004 -1.5201 -3.2724 9 7 3.7508 -2.2381 -2.9644 10 14 5.5159 -1.6033 -4.9959 11 1 6.5410 -2.6761 -5.0551 12 1 4.4329 -1.8994 -5.9678 13 1 6.1427 -0.3004 -5.3352 14 6 5.3566 0.0138 0.0341 15 9 6.7075 0.0197 0.0516 16 6 4.6497 0.3553 1.1702 17 6 5.3895 0.7333 2.4276 18 9 4.4693 1.0360 3.4369 19 9 6.1928 1.8510 2.1777 20 9 6.1931 -0.3368 2.8353 21 6 3.2681 0.3464 1.1627 22 1 2.7267 -0.6140 -2.0515 23 1 3.3440 -2.8134 -3.6312 24 1 2.7247 0.6108 2.0578 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575648353.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:08:55 Heat of formation + Delta-G solvation = -161.103404 kcal Electronic energy + Delta-G solvation = -18748.610938 eV Core-core repulsion = 14933.017064 eV Total energy + Delta-G solvation = -3815.593873 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 259.031 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -49.66871 -47.83793 -47.11819 -47.08537 -38.25618 -35.79915 -34.33387 -31.06509 -30.39859 -25.96794 -25.30179 -22.66686 -21.53239 -19.13154 -17.97976 -17.95483 -16.81816 -16.71573 -16.17607 -15.51463 -14.98477 -14.58760 -13.97343 -13.93274 -13.56057 -13.45393 -13.29973 -13.28693 -13.21066 -12.97397 -12.76965 -12.44184 -11.99003 -11.88207 -11.60669 -11.33480 -11.12341 -10.79078 -10.59799 -10.16556 -9.65151 -8.33827 -7.95394 -7.26664 -4.87927 1.56847 1.94805 2.79632 2.87700 2.93108 3.14987 3.31527 3.47667 3.62949 4.20818 4.27348 4.53085 4.75280 4.78880 5.06717 5.24748 5.84954 6.12169 6.33743 6.57039 6.70598 6.82202 7.09589 7.28006 7.34426 7.91693 8.08861 8.16691 8.26226 9.67474 Molecular weight = 259.03amu Principal moments of inertia in cm(-1) A = 0.019610 B = 0.008450 C = 0.006227 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1427.520519 B = 3312.924473 C = 4495.181644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.458 5.458 2 C 0.281 3.719 3 C -0.027 4.027 4 C -0.069 4.069 5 C 0.078 3.922 6 C -0.433 4.433 7 H 0.095 0.905 8 C 0.073 3.927 9 N -0.777 5.777 10 Si 0.921 3.079 11 H -0.264 1.264 12 H -0.272 1.272 13 H -0.255 1.255 14 C 0.040 3.960 15 F -0.142 7.142 16 C -0.179 4.179 17 C 0.512 3.488 18 F -0.183 7.183 19 F -0.180 7.180 20 F -0.180 7.180 21 C -0.141 4.141 22 H 0.143 0.857 23 H 0.292 0.708 24 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.861 2.291 2.240 4.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.134 5.134 2 C -0.033 4.033 3 C -0.031 4.031 4 C -0.091 4.091 5 C 0.074 3.926 6 C -0.460 4.460 7 H 0.113 0.887 8 C -0.148 4.148 9 N -0.400 5.400 10 Si 0.744 3.256 11 H -0.189 1.189 12 H -0.196 1.196 13 H -0.179 1.179 14 C 0.019 3.981 15 F -0.120 7.120 16 C -0.181 4.181 17 C 0.458 3.542 18 F -0.165 7.165 19 F -0.162 7.162 20 F -0.161 7.161 21 C -0.163 4.163 22 H 0.160 0.840 23 H 0.104 0.896 24 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 1.010 2.107 2.173 3.191 hybrid contribution 1.045 -0.146 -0.447 1.146 sum 2.055 1.961 1.727 3.324 Atomic orbital electron populations 1.81115 1.12353 1.10874 1.09063 1.25911 0.92819 0.92250 0.92303 1.15718 0.83451 1.07890 0.96015 1.21496 0.93349 0.97891 0.96402 1.17378 0.91708 0.92536 0.90954 1.19632 1.02089 1.23855 1.00419 0.88708 1.26036 0.94234 0.92989 1.01556 1.69722 1.17475 1.16571 1.36269 0.86067 0.79663 0.80392 0.79523 1.18902 1.19622 1.17881 1.17503 0.76368 1.10666 0.93581 1.91377 1.29129 1.94545 1.96971 1.19320 0.94722 1.12330 0.91766 1.18316 0.77086 0.74551 0.84260 1.93113 1.66507 1.93342 1.63493 1.93180 1.74969 1.53739 1.94289 1.93186 1.74931 1.56298 1.91685 1.19877 0.90796 1.07889 0.97772 0.83962 0.89622 0.85781 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.46 -9.29 18.54 41.84 0.78 -8.51 14 2 C 0.28 5.50 15.32 -22.47 -0.34 5.16 14 3 C -0.03 -0.53 5.73 -106.98 -0.61 -1.14 14 4 C -0.07 -1.48 8.38 -38.45 -0.32 -1.81 14 5 C 0.08 1.77 5.57 -106.81 -0.59 1.17 14 6 C -0.43 -9.82 8.77 -37.77 -0.33 -10.15 14 7 H 0.09 2.11 7.74 -52.49 -0.41 1.70 14 8 C 0.07 1.56 5.15 -17.34 -0.09 1.47 14 9 N -0.78 -17.07 10.97 55.55 0.61 -16.46 14 10 Si 0.92 16.14 29.59 -169.99 -5.03 11.11 14 11 H -0.26 -4.64 7.11 56.52 0.40 -4.24 14 12 H -0.27 -4.67 7.11 56.52 0.40 -4.27 14 13 H -0.26 -4.47 7.11 56.52 0.40 -4.07 14 14 C 0.04 0.88 7.13 -38.55 -0.27 0.61 14 15 F -0.14 -3.13 15.85 2.25 0.04 -3.09 14 16 C -0.18 -3.57 5.37 -104.70 -0.56 -4.14 14 17 C 0.51 9.42 3.02 36.01 0.11 9.53 14 18 F -0.18 -3.10 15.94 2.25 0.04 -3.07 14 19 F -0.18 -3.31 17.03 2.25 0.04 -3.27 14 20 F -0.18 -3.36 17.03 2.25 0.04 -3.32 14 21 C -0.14 -2.68 9.14 -38.93 -0.36 -3.03 14 22 H 0.14 3.13 6.19 -52.48 -0.33 2.80 14 23 H 0.29 5.82 8.30 -40.82 -0.34 5.48 14 24 H 0.12 2.10 7.12 -52.49 -0.37 1.73 14 LS Contribution 249.18 15.07 3.76 3.76 Total: -1.00 -22.70 249.18 -3.36 -26.06 By element: Atomic # 1 Polarization: -0.62 SS G_CDS: -0.24 Total: -0.86 kcal Atomic # 6 Polarization: 1.04 SS G_CDS: -3.38 Total: -2.34 kcal Atomic # 7 Polarization: -26.35 SS G_CDS: 1.38 Total: -24.97 kcal Atomic # 9 Polarization: -12.90 SS G_CDS: 0.15 Total: -12.75 kcal Atomic # 14 Polarization: 16.14 SS G_CDS: -5.03 Total: 11.11 kcal Total LS contribution 3.76 Total: 3.76 kcal Total: -22.70 -3.36 -26.06 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575648353.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.047 kcal (2) G-P(sol) polarization free energy of solvation -22.698 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.745 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.359 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds