Wall clock time and date at job start Mon Mar 30 2020 06:21:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09002 * 109.47153 * 2 1 4 4 C 1.52992 * 109.47482 * 239.99783 * 2 1 3 5 5 C 1.50707 * 109.46966 * 64.99950 * 4 2 1 6 6 H 1.07991 * 119.99895 * 0.02562 * 5 4 2 7 7 C 1.37881 * 120.00104 * 180.02562 * 5 4 2 8 8 N 1.31516 * 119.99811 * 0.02562 * 7 5 4 9 9 Si 1.86791 * 120.00175 * 180.02562 * 7 5 4 10 10 H 1.48495 * 109.47336 * 59.99992 * 9 7 5 11 11 H 1.48497 * 109.47563 * 180.02562 * 9 7 5 12 12 H 1.48502 * 109.46893 * 300.00113 * 9 7 5 13 13 N 1.46497 * 109.47188 * 119.99573 * 2 1 3 14 14 C 1.35051 * 126.03416 * 34.71887 * 13 2 1 15 15 C 1.35381 * 107.72698 * 179.87370 * 14 13 2 16 16 Cl 1.73593 * 126.04356 * 180.12754 * 15 14 13 17 17 C 1.39930 * 107.90431 * 0.38572 * 15 14 13 18 18 N 1.48025 * 125.88501 * 179.75733 * 17 15 14 19 19 O 1.21805 * 119.99409 * 179.97438 * 18 17 15 20 20 O 1.21789 * 120.00654 * 359.97438 * 18 17 15 21 21 N 1.30845 * 108.21781 * 359.76118 * 17 15 14 22 22 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.46832 * 60.00191 * 1 2 3 24 24 H 1.09004 * 109.47261 * 300.00172 * 1 2 3 25 25 H 1.08996 * 109.47729 * 184.99759 * 4 2 1 26 26 H 1.09001 * 109.47563 * 305.00337 * 4 2 1 27 27 H 0.97004 * 120.00016 * 180.02562 * 8 7 5 28 28 H 1.07995 * 126.13315 * 359.97438 * 14 13 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0400 -0.7212 -1.2491 5 6 1.6414 0.0571 -2.4765 6 1 1.0807 0.9745 -2.3757 7 6 1.9924 -0.4022 -3.7283 8 7 2.6748 -1.5198 -3.8512 9 14 1.4989 0.5628 -5.2496 10 1 2.0920 1.9227 -5.1872 11 1 1.9928 -0.1379 -6.4622 12 1 0.0190 0.6704 -5.3090 13 7 2.0183 -0.6905 1.1962 14 6 1.4368 -1.7533 1.7931 15 6 2.1963 -2.0928 2.8611 16 17 1.8848 -3.3980 3.9624 17 6 3.2735 -1.2019 2.9236 18 7 4.3475 -1.2092 3.9422 19 8 5.2382 -0.3797 3.8939 20 8 4.3407 -2.0444 4.8286 21 7 3.1676 -0.3614 1.9264 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3634 0.5139 0.8900 25 1 3.1263 -0.7994 -1.2055 26 1 1.6054 -1.7198 -1.2951 27 1 2.9221 -1.8428 -4.7318 28 1 0.5297 -2.2451 1.4745 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000695809493.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:21:19 Heat of formation + Delta-G solvation = 65.581969 kcal Electronic energy + Delta-G solvation = -16821.102495 eV Core-core repulsion = 13710.515384 eV Total energy + Delta-G solvation = -3110.587111 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 259.051 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -42.34489 -41.40744 -36.78538 -36.46883 -35.85994 -32.91564 -31.02745 -30.19497 -27.61379 -26.77956 -24.23402 -22.43964 -21.60375 -20.24219 -18.60521 -18.45903 -17.65639 -17.27177 -16.19467 -15.46275 -14.77822 -14.58928 -14.11229 -13.79039 -12.91570 -12.42134 -12.07032 -12.00882 -11.86592 -11.53979 -11.44254 -11.29469 -11.14539 -11.08815 -10.95421 -10.73410 -10.49256 -10.42326 -9.68588 -9.61714 -8.77704 -8.68303 -6.32409 -4.39782 0.13736 0.81585 1.47945 1.80246 2.15829 2.64832 3.14701 3.21510 3.22045 4.04421 4.20630 4.63510 4.88353 5.03593 5.11961 5.25940 5.30402 5.52658 5.94692 6.11984 6.25989 6.32316 6.54340 6.81163 7.17411 7.21511 7.59788 7.74790 7.90965 8.63625 9.26792 10.78459 Molecular weight = 259.05amu Principal moments of inertia in cm(-1) A = 0.031673 B = 0.004902 C = 0.004642 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 883.812396 B = 5710.759025 C = 6030.268586 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.144 3.856 3 H 0.109 0.891 4 C 0.018 3.982 5 C -0.531 4.531 6 H 0.064 0.936 7 C 0.064 3.936 8 N -0.886 5.886 9 Si 0.901 3.099 10 H -0.274 1.274 11 H -0.285 1.285 12 H -0.274 1.274 13 N -0.288 5.288 14 C 0.091 3.909 15 C -0.151 4.151 16 Cl -0.007 7.007 17 C 0.115 3.885 18 N 0.061 4.939 19 O -0.135 6.135 20 O -0.126 6.126 21 N -0.199 5.199 22 H 0.063 0.937 23 H 0.102 0.898 24 H 0.051 0.949 25 H 0.029 0.971 26 H 0.028 0.972 27 H 0.267 0.733 28 H 0.204 0.796 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.294 -1.041 10.723 12.004 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C 0.046 3.954 3 H 0.127 0.873 4 C -0.020 4.020 5 C -0.570 4.570 6 H 0.082 0.918 7 C -0.139 4.139 8 N -0.524 5.524 9 Si 0.728 3.272 10 H -0.199 1.199 11 H -0.211 1.211 12 H -0.200 1.200 13 N -0.075 5.075 14 C -0.058 4.058 15 C -0.191 4.191 16 Cl 0.021 6.979 17 C -0.128 4.128 18 N 0.586 4.414 19 O -0.353 6.353 20 O -0.344 6.344 21 N -0.033 5.033 22 H 0.082 0.918 23 H 0.120 0.880 24 H 0.070 0.930 25 H 0.047 0.953 26 H 0.047 0.953 27 H 0.076 0.924 28 H 0.221 0.779 Dipole moment (debyes) X Y Z Total from point charges -5.247 -0.221 9.543 10.893 hybrid contribution -0.239 -0.392 -0.251 0.523 sum -5.486 -0.613 9.292 10.808 Atomic orbital electron populations 1.22161 0.92174 1.03251 1.03416 1.22546 0.95135 0.97895 0.79789 0.87343 1.19585 0.97741 0.96160 0.88480 1.20872 1.37195 1.08983 0.89917 0.91832 1.25001 0.94569 0.94991 0.99386 1.69944 1.37281 1.20715 1.24416 0.86514 0.78973 0.80049 0.81709 1.19938 1.21064 1.19956 1.49769 1.14882 1.21922 1.20943 1.22476 1.00079 0.91144 0.92089 1.20225 0.98598 0.99664 1.00644 1.98368 1.95106 1.44417 1.59969 1.22416 0.93438 1.01028 0.95936 1.42132 0.99732 0.99861 0.99632 1.94604 1.27548 1.33073 1.80085 1.94586 1.81465 1.32401 1.25906 1.77499 1.03404 1.19344 1.03006 0.91763 0.87957 0.93021 0.95256 0.95325 0.92360 0.77947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.04 8.64 37.16 0.32 -1.72 15 2 C 0.14 2.44 3.35 -67.94 -0.23 2.21 15 3 H 0.11 1.86 8.14 -51.93 -0.42 1.44 15 4 C 0.02 0.41 4.77 -27.88 -0.13 0.27 15 5 C -0.53 -12.84 8.41 -34.44 -0.29 -13.12 15 6 H 0.06 1.43 7.06 -52.49 -0.37 1.06 15 7 C 0.06 1.65 5.46 -17.82 -0.10 1.55 15 8 N -0.89 -24.42 13.29 55.43 0.74 -23.69 15 9 Si 0.90 19.61 29.54 -169.99 -5.02 14.59 15 10 H -0.27 -5.92 7.11 56.52 0.40 -5.52 15 11 H -0.29 -6.27 7.11 56.52 0.40 -5.87 15 12 H -0.27 -5.79 7.11 56.52 0.40 -5.39 15 13 N -0.29 -4.78 3.53 -54.83 -0.19 -4.97 15 14 C 0.09 1.28 10.57 -17.15 -0.18 1.10 15 15 C -0.15 -2.28 6.63 -39.97 -0.26 -2.54 15 16 Cl -0.01 -0.09 27.87 -51.86 -1.45 -1.54 15 17 C 0.11 2.01 8.15 -146.37 -1.19 0.81 15 18 N 0.06 1.07 4.45 33.03 0.15 1.22 15 19 O -0.14 -2.47 19.23 -29.46 -0.57 -3.04 15 20 O -0.13 -2.11 17.75 -29.46 -0.52 -2.63 15 21 N -0.20 -3.70 12.54 33.03 0.41 -3.29 15 22 H 0.06 0.78 7.15 -51.93 -0.37 0.41 15 23 H 0.10 1.44 6.95 -51.93 -0.36 1.08 15 24 H 0.05 0.58 8.14 -51.93 -0.42 0.16 15 25 H 0.03 0.74 8.14 -51.93 -0.42 0.32 15 26 H 0.03 0.66 8.14 -51.93 -0.42 0.24 15 27 H 0.27 7.00 8.31 -40.82 -0.34 6.66 15 28 H 0.20 2.07 7.26 -52.49 -0.38 1.69 15 LS Contribution 274.80 15.07 4.14 4.14 Total: -1.00 -27.68 274.80 -6.69 -34.36 By element: Atomic # 1 Polarization: -1.40 SS G_CDS: -2.31 Total: -3.71 kcal Atomic # 6 Polarization: -9.37 SS G_CDS: -2.07 Total: -11.44 kcal Atomic # 7 Polarization: -31.84 SS G_CDS: 1.10 Total: -30.73 kcal Atomic # 8 Polarization: -4.58 SS G_CDS: -1.09 Total: -5.67 kcal Atomic # 14 Polarization: 19.61 SS G_CDS: -5.02 Total: 14.59 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.45 Total: -1.54 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -27.68 -6.69 -34.36 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000695809493.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.946 kcal (2) G-P(sol) polarization free energy of solvation -27.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.267 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.685 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.364 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.582 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds