Wall clock time and date at job start Mon Mar 30 2020 06:14:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35768 * 117.00189 * 2 1 4 4 N 1.32149 * 119.69203 * 359.97438 * 3 2 1 5 5 C 1.32232 * 122.33885 * 180.02562 * 4 3 2 6 6 C 1.36376 * 121.42979 * 359.97438 * 5 4 3 7 7 C 1.50693 * 120.41165 * 179.72707 * 6 5 4 8 8 F 1.39896 * 109.47691 * 22.64734 * 7 6 5 9 9 F 1.39900 * 109.46848 * 142.64909 * 7 6 5 10 10 C 1.41213 * 119.17109 * 0.02562 * 6 5 4 11 11 C 1.41241 * 121.03591 * 179.97438 * 10 6 5 12 12 H 1.07994 * 120.00215 * 319.89509 * 11 10 6 13 13 C 1.40030 * 119.99782 * 139.89422 * 11 10 6 14 14 N 1.30778 * 120.00003 * 341.21394 * 13 11 10 15 15 Si 1.86798 * 120.00105 * 161.21442 * 13 11 10 16 16 H 1.48500 * 109.47040 * 90.00144 * 15 13 11 17 17 H 1.48499 * 109.47561 * 209.99824 * 15 13 11 18 18 H 1.48498 * 109.47206 * 330.00112 * 15 13 11 19 19 C 1.39331 * 119.69201 * 180.02562 * 3 2 1 20 20 O 1.35701 * 120.73448 * 0.02562 * 19 3 2 21 21 C 1.42901 * 117.00085 * 91.79151 * 20 19 3 22 22 H 1.08993 * 109.47094 * 180.02562 * 1 2 3 23 23 H 1.08998 * 109.47168 * 300.00825 * 1 2 3 24 24 H 1.09007 * 109.46397 * 60.00095 * 1 2 3 25 25 H 1.07998 * 119.28748 * 179.97438 * 5 4 3 26 26 H 1.09007 * 109.47597 * 262.64331 * 7 6 5 27 27 H 0.97004 * 119.99924 * 179.97438 * 14 13 11 28 28 H 1.08999 * 109.47106 * 179.97438 * 21 20 19 29 29 H 1.09000 * 109.46682 * 299.99298 * 21 20 19 30 30 H 1.08996 * 109.47337 * 59.99547 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0454 1.2097 0.0000 4 7 1.3198 2.3141 -0.0005 5 6 1.8651 3.5188 -0.0010 6 6 3.2185 3.6867 -0.0006 7 6 3.8154 5.0704 -0.0074 8 9 2.8821 5.9835 0.4946 9 9 4.9621 5.0874 0.7940 10 6 4.0534 2.5479 0.0000 11 6 5.4600 2.6761 -0.0001 12 1 5.9328 3.4372 -0.6029 13 6 6.2414 1.8163 0.7816 14 7 5.6974 1.1564 1.7710 15 14 8.0608 1.6119 0.4111 16 1 8.8386 2.6156 1.1810 17 1 8.4947 0.2458 0.7992 18 1 8.2957 1.8118 -1.0415 19 6 3.4372 1.2751 -0.0005 20 8 4.1847 0.1425 -0.0016 21 6 4.5748 -0.3762 -1.2747 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3633 0.5139 0.8899 24 1 -0.3632 0.5139 -0.8901 25 1 1.2249 4.3885 -0.0019 26 1 4.0813 5.3465 -1.0278 27 1 6.2387 0.5605 2.3122 28 1 5.1667 -1.2804 -1.1328 29 1 3.6853 -0.6119 -1.8590 30 1 5.1701 0.3681 -1.8034 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000309498626.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:14:34 Heat of formation + Delta-G solvation = -143.057934 kcal Electronic energy + Delta-G solvation = -20217.123456 eV Core-core repulsion = 16649.232703 eV Total energy + Delta-G solvation = -3567.890753 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 259.081 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -48.01020 -45.99038 -39.41622 -37.11243 -36.32039 -33.78646 -31.23678 -29.51492 -27.25121 -26.31262 -25.12690 -24.63706 -21.58440 -20.73554 -18.15723 -16.88683 -16.67377 -16.51466 -16.20715 -15.36027 -15.19835 -15.11844 -14.83449 -13.94911 -13.88034 -13.26099 -12.87245 -12.60356 -12.45572 -12.29163 -12.18408 -11.90419 -11.46664 -11.27037 -11.16780 -10.93767 -10.88659 -10.38381 -10.28464 -10.12506 -9.24744 -9.16912 -8.25688 -7.92187 -7.19753 -6.91176 -4.68965 2.31171 2.62037 3.03980 3.05949 3.09878 3.86516 4.05215 4.49321 4.74445 4.93108 5.18127 5.46432 5.52868 5.76734 5.81555 5.86858 5.94943 6.09160 6.18897 6.27018 6.36405 6.42560 6.68528 6.97331 7.09291 7.27058 7.46258 8.03882 8.15109 8.40215 8.60284 8.99156 9.17939 10.08309 Molecular weight = 259.08amu Principal moments of inertia in cm(-1) A = 0.015878 B = 0.012197 C = 0.007406 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1763.018578 B = 2295.014119 C = 3779.871611 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 O -0.311 6.311 3 C 0.308 3.692 4 N -0.611 5.611 5 C 0.169 3.831 6 C -0.335 4.335 7 C 0.341 3.659 8 F -0.220 7.220 9 F -0.193 7.193 10 C 0.162 3.838 11 C -0.441 4.441 12 H 0.088 0.912 13 C 0.091 3.909 14 N -0.733 5.733 15 Si 0.902 3.098 16 H -0.267 1.267 17 H -0.273 1.273 18 H -0.259 1.259 19 C -0.038 4.038 20 O -0.283 6.283 21 C 0.034 3.966 22 H 0.080 0.920 23 H 0.049 0.951 24 H 0.048 0.952 25 H 0.135 0.865 26 H 0.095 0.905 27 H 0.286 0.714 28 H 0.069 0.931 29 H 0.024 0.976 30 H 0.037 0.963 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.558 0.477 -4.356 4.651 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 O -0.219 6.219 3 C 0.134 3.866 4 N -0.341 5.341 5 C 0.016 3.984 6 C -0.342 4.342 7 C 0.286 3.714 8 F -0.201 7.201 9 F -0.174 7.174 10 C 0.154 3.846 11 C -0.470 4.470 12 H 0.106 0.894 13 C -0.135 4.135 14 N -0.354 5.354 15 Si 0.725 3.275 16 H -0.192 1.192 17 H -0.198 1.198 18 H -0.183 1.183 19 C -0.087 4.087 20 O -0.197 6.197 21 C -0.062 4.062 22 H 0.098 0.902 23 H 0.068 0.932 24 H 0.067 0.933 25 H 0.153 0.847 26 H 0.112 0.888 27 H 0.098 0.902 28 H 0.088 0.912 29 H 0.043 0.957 30 H 0.056 0.944 Dipole moment (debyes) X Y Z Total from point charges -2.254 -0.163 -3.956 4.556 hybrid contribution 1.376 0.161 -0.152 1.394 sum -0.878 -0.002 -4.108 4.201 Atomic orbital electron populations 1.22590 0.79744 1.01104 1.01575 1.86289 1.20870 1.26058 1.88703 1.20264 0.88695 0.84173 0.93463 1.67062 1.39412 0.97926 1.29671 1.21077 0.91621 0.93083 0.92605 1.20733 0.95075 0.94359 1.23998 1.19742 0.74899 0.85867 0.90846 1.92879 1.67444 1.69640 1.90183 1.92995 1.50697 1.96883 1.76807 1.17430 0.93578 0.88093 0.85472 1.19331 0.90004 1.14621 1.23019 0.89364 1.25748 1.01010 0.93213 0.93556 1.69692 1.38653 1.16869 1.10157 0.86409 0.82109 0.78614 0.80354 1.19249 1.19803 1.18284 1.18444 0.84785 0.87397 1.18064 1.86171 1.69693 1.38711 1.25123 1.22734 0.97962 0.97721 0.87745 0.90180 0.93182 0.93341 0.84720 0.88782 0.90241 0.91239 0.95689 0.94413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.79 10.38 101.05 1.05 1.84 16 2 O -0.31 -7.00 10.28 -33.24 -0.34 -7.34 16 3 C 0.31 7.57 7.51 -17.01 -0.13 7.44 16 4 N -0.61 -14.32 9.18 -13.58 -0.12 -14.44 16 5 C 0.17 3.75 10.49 -18.05 -0.19 3.56 16 6 C -0.33 -7.74 5.76 -104.17 -0.60 -8.34 16 7 C 0.34 6.86 5.30 36.00 0.19 7.05 16 8 F -0.22 -4.26 16.27 2.25 0.04 -4.22 16 9 F -0.19 -4.33 14.99 2.25 0.03 -4.30 16 10 C 0.16 4.12 5.34 -106.42 -0.57 3.55 16 11 C -0.44 -10.94 6.86 -37.77 -0.26 -11.20 16 12 H 0.09 2.08 7.36 -52.49 -0.39 1.69 16 13 C 0.09 2.20 4.52 -17.33 -0.08 2.12 16 14 N -0.73 -18.90 11.33 55.55 0.63 -18.27 16 15 Si 0.90 18.11 29.60 -169.99 -5.03 13.08 16 16 H -0.27 -5.34 7.11 56.52 0.40 -4.94 16 17 H -0.27 -5.39 7.11 56.52 0.40 -4.99 16 18 H -0.26 -5.06 7.11 56.52 0.40 -4.66 16 19 C -0.04 -0.97 5.27 -37.97 -0.20 -1.17 16 20 O -0.28 -7.11 7.40 -33.04 -0.24 -7.36 16 21 C 0.03 0.70 11.13 101.05 1.12 1.82 16 22 H 0.08 1.10 8.14 -51.93 -0.42 0.68 16 23 H 0.05 0.87 8.10 -51.93 -0.42 0.45 16 24 H 0.05 0.80 8.11 -51.92 -0.42 0.38 16 25 H 0.14 2.60 7.37 -52.49 -0.39 2.22 16 26 H 0.09 1.58 8.14 -51.93 -0.42 1.16 16 27 H 0.29 6.77 8.30 -40.82 -0.34 6.44 16 28 H 0.07 1.25 8.14 -51.93 -0.42 0.83 16 29 H 0.02 0.48 8.14 -51.93 -0.42 0.06 16 30 H 0.04 0.77 8.14 -51.93 -0.42 0.34 16 LS Contribution 272.88 15.07 4.11 4.11 Total: -1.00 -28.96 272.88 -3.45 -32.42 By element: Atomic # 1 Polarization: 2.51 SS G_CDS: -2.86 Total: -0.35 kcal Atomic # 6 Polarization: 6.33 SS G_CDS: 0.34 Total: 6.67 kcal Atomic # 7 Polarization: -33.21 SS G_CDS: 0.50 Total: -32.71 kcal Atomic # 8 Polarization: -14.11 SS G_CDS: -0.59 Total: -14.70 kcal Atomic # 9 Polarization: -8.59 SS G_CDS: 0.07 Total: -8.52 kcal Atomic # 14 Polarization: 18.11 SS G_CDS: -5.03 Total: 13.08 kcal Total LS contribution 4.11 Total: 4.11 kcal Total: -28.96 -3.45 -32.42 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000309498626.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.643 kcal (2) G-P(sol) polarization free energy of solvation -28.965 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.607 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.451 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.415 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.058 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds