Wall clock time and date at job start Mon Mar 30 2020 06:14:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35522 * 117.00185 * 2 1 4 4 N 1.32695 * 119.36308 * 359.97438 * 3 2 1 5 5 C 1.31475 * 122.06133 * 179.97438 * 4 3 2 6 6 C 1.40641 * 120.51182 * 0.02562 * 5 4 3 7 7 C 1.41113 * 120.65216 * 180.02562 * 6 5 4 8 8 H 1.08000 * 120.00333 * 155.99622 * 7 6 5 9 9 C 1.39879 * 119.99534 * 335.99190 * 7 6 5 10 10 N 1.30925 * 119.99929 * 341.65939 * 9 7 6 11 11 Si 1.86798 * 119.99967 * 161.65702 * 9 7 6 12 12 H 1.48501 * 109.47249 * 90.00045 * 11 9 7 13 13 H 1.48505 * 109.47270 * 210.00186 * 11 9 7 14 14 H 1.48497 * 109.47026 * 330.00042 * 11 9 7 15 15 C 1.41876 * 118.70136 * 359.75122 * 6 5 4 16 16 O 1.35552 * 120.93471 * 180.27411 * 15 6 5 17 17 C 1.42894 * 117.00113 * 270.24082 * 16 15 6 18 18 C 1.38485 * 118.13574 * 0.50527 * 15 6 5 19 19 C 1.50702 * 120.34322 * 179.74501 * 18 15 6 20 20 F 1.39894 * 109.46995 * 59.72776 * 19 18 15 21 21 F 1.39897 * 109.47040 * 299.72569 * 19 18 15 22 22 H 1.09005 * 109.47012 * 300.00479 * 1 2 3 23 23 H 1.08998 * 109.46974 * 59.99756 * 1 2 3 24 24 H 1.08997 * 109.47328 * 180.02562 * 1 2 3 25 25 H 1.08005 * 119.74330 * 180.02562 * 5 4 3 26 26 H 0.97000 * 119.99909 * 180.02562 * 10 9 7 27 27 H 1.09001 * 109.47592 * 180.02562 * 17 16 15 28 28 H 1.09001 * 109.46933 * 299.99909 * 17 16 15 29 29 H 1.09002 * 109.47463 * 59.99353 * 17 16 15 30 30 H 1.09001 * 109.47072 * 179.72498 * 19 18 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0443 1.2075 0.0000 4 7 1.3093 2.3123 -0.0005 5 6 1.8504 3.5105 0.0000 6 6 3.2486 3.6626 0.0005 7 6 3.8325 4.9473 0.0015 8 1 4.8336 5.0851 0.3824 9 6 3.1146 6.0421 -0.4908 10 7 2.0777 5.8496 -1.2668 11 14 3.6351 7.7789 -0.0412 12 1 4.6067 8.2803 -1.0461 13 1 2.4425 8.6636 -0.0213 14 1 4.2698 7.7735 1.3013 15 6 4.0605 2.4992 0.0059 16 8 5.4127 2.5931 0.0122 17 6 6.0656 2.6417 -1.2579 18 6 3.4328 1.2647 -0.0003 19 6 4.2470 -0.0034 -0.0008 20 9 5.0538 -0.0399 1.1416 21 9 5.0540 -0.0390 -1.1430 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 1.2163 4.3848 -0.0001 26 1 1.5801 6.6089 -1.6085 27 1 7.1430 2.7158 -1.1101 28 1 5.8376 1.7351 -1.8185 29 1 5.7142 3.5108 -1.8141 30 1 3.5786 -0.8643 -0.0011 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000309507312.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:14:58 Heat of formation + Delta-G solvation = -149.820851 kcal Electronic energy + Delta-G solvation = -20061.311605 eV Core-core repulsion = 16493.127590 eV Total energy + Delta-G solvation = -3568.184015 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 259.081 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -48.26175 -46.25652 -39.45965 -37.75869 -36.08792 -33.99841 -31.35733 -30.08391 -27.08501 -26.29492 -25.11340 -25.03874 -21.37056 -21.17564 -17.85572 -17.62700 -17.29250 -16.56640 -16.02045 -15.53172 -15.14721 -15.06514 -14.89015 -14.36957 -14.11163 -13.39035 -13.29957 -12.78855 -12.65296 -12.30492 -12.16663 -12.03925 -11.66632 -11.44536 -11.24786 -11.08670 -10.85640 -10.70095 -10.27833 -10.11653 -9.48375 -8.97723 -8.48345 -8.42394 -7.57169 -7.08606 -4.54731 2.12195 2.41422 2.95708 2.97030 3.05336 3.75221 3.92584 4.31433 4.52053 4.76060 4.99419 5.32014 5.41143 5.70502 5.76564 5.79372 5.86741 6.12606 6.14706 6.16804 6.35105 6.42361 6.69806 6.78521 6.94694 7.09519 7.57066 7.94776 8.15761 8.30850 8.49724 8.68094 9.20529 9.87907 Molecular weight = 259.08amu Principal moments of inertia in cm(-1) A = 0.021360 B = 0.008613 C = 0.006601 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1310.536388 B = 3250.195583 C = 4240.592744 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 O -0.329 6.329 3 C 0.216 3.784 4 N -0.520 5.520 5 C 0.102 3.898 6 C 0.026 3.974 7 C -0.429 4.429 8 H 0.090 0.910 9 C 0.072 3.928 10 N -0.789 5.789 11 Si 0.917 3.083 12 H -0.267 1.267 13 H -0.273 1.273 14 H -0.257 1.257 15 C 0.064 3.936 16 O -0.318 6.318 17 C 0.030 3.970 18 C -0.217 4.217 19 C 0.329 3.671 20 F -0.203 7.203 21 F -0.208 7.208 22 H 0.049 0.951 23 H 0.050 0.950 24 H 0.080 0.920 25 H 0.164 0.836 26 H 0.288 0.712 27 H 0.076 0.924 28 H 0.047 0.953 29 H 0.045 0.955 30 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.073 -4.165 -0.072 4.166 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.043 4.043 2 O -0.239 6.239 3 C 0.041 3.959 4 N -0.240 5.240 5 C -0.061 4.061 6 C 0.021 3.979 7 C -0.458 4.458 8 H 0.109 0.891 9 C -0.147 4.147 10 N -0.414 5.414 11 Si 0.740 3.260 12 H -0.192 1.192 13 H -0.198 1.198 14 H -0.181 1.181 15 C 0.012 3.988 16 O -0.234 6.234 17 C -0.064 4.064 18 C -0.221 4.221 19 C 0.275 3.725 20 F -0.184 7.184 21 F -0.190 7.190 22 H 0.068 0.932 23 H 0.068 0.932 24 H 0.099 0.901 25 H 0.181 0.819 26 H 0.099 0.901 27 H 0.095 0.905 28 H 0.066 0.934 29 H 0.064 0.936 30 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -0.735 -4.412 -0.064 4.473 hybrid contribution 0.819 1.077 -0.219 1.371 sum 0.084 -3.335 -0.284 3.348 Atomic orbital electron populations 1.22531 0.78936 1.01034 1.01820 1.85913 1.21483 1.25971 1.90569 1.18508 0.86934 0.84520 1.05913 1.66975 1.40528 0.99033 1.17461 1.22829 0.92934 0.91852 0.98469 1.18726 0.92574 0.93109 0.93500 1.19414 1.02055 0.90395 1.33934 0.89148 1.26045 0.93980 1.02429 0.92296 1.69771 1.15519 1.34647 1.21472 0.86145 0.79237 0.80007 0.80572 1.19229 1.19790 1.18077 1.18277 0.83098 0.90261 1.07151 1.85880 1.15685 1.93720 1.28158 1.23007 0.96360 1.00934 0.86144 1.20095 0.91664 0.94402 1.15901 1.20023 0.83342 0.98344 0.70819 1.92957 1.76322 1.97706 1.51455 1.92879 1.76563 1.97544 1.51994 0.93222 0.93175 0.90143 0.81878 0.90075 0.90515 0.93429 0.93646 0.86946 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.85 10.37 101.05 1.05 1.90 16 2 O -0.33 -6.59 9.22 -18.26 -0.17 -6.76 16 3 C 0.22 5.00 7.47 -16.91 -0.13 4.87 16 4 N -0.52 -12.56 9.15 -12.70 -0.12 -12.68 16 5 C 0.10 2.56 9.89 -16.80 -0.17 2.40 16 6 C 0.03 0.67 5.60 -106.51 -0.60 0.07 16 7 C -0.43 -10.71 8.77 -37.88 -0.33 -11.04 16 8 H 0.09 2.25 7.70 -52.49 -0.40 1.84 16 9 C 0.07 1.65 5.14 -17.32 -0.09 1.57 16 10 N -0.79 -18.68 10.98 55.55 0.61 -18.07 16 11 Si 0.92 17.42 29.60 -169.99 -5.03 12.39 16 12 H -0.27 -5.03 7.11 56.52 0.40 -4.63 16 13 H -0.27 -5.04 7.11 56.52 0.40 -4.64 16 14 H -0.26 -4.92 7.11 56.52 0.40 -4.52 16 15 C 0.06 1.58 5.69 -38.10 -0.22 1.37 16 16 O -0.32 -7.54 9.03 -18.35 -0.17 -7.71 16 17 C 0.03 0.61 10.81 101.05 1.09 1.70 16 18 C -0.22 -5.07 5.40 -104.26 -0.56 -5.63 16 19 C 0.33 6.69 5.11 36.01 0.18 6.88 16 20 F -0.20 -4.28 17.02 2.25 0.04 -4.24 16 21 F -0.21 -4.20 14.49 2.25 0.03 -4.17 16 22 H 0.05 0.80 8.10 -51.93 -0.42 0.38 16 23 H 0.05 0.83 8.10 -51.93 -0.42 0.40 16 24 H 0.08 0.99 8.14 -51.93 -0.42 0.56 16 25 H 0.16 4.10 6.15 -52.48 -0.32 3.77 16 26 H 0.29 6.16 8.30 -40.82 -0.34 5.82 16 27 H 0.08 1.28 8.14 -51.93 -0.42 0.86 16 28 H 0.05 0.93 5.74 -51.93 -0.30 0.64 16 29 H 0.04 0.92 8.14 -51.93 -0.42 0.50 16 30 H 0.11 2.00 6.99 -51.93 -0.36 1.63 16 LS Contribution 270.53 15.07 4.08 4.08 Total: -1.00 -27.34 270.53 -3.12 -30.46 By element: Atomic # 1 Polarization: 5.26 SS G_CDS: -2.63 Total: 2.63 kcal Atomic # 6 Polarization: 3.84 SS G_CDS: 0.23 Total: 4.08 kcal Atomic # 7 Polarization: -31.24 SS G_CDS: 0.49 Total: -30.75 kcal Atomic # 8 Polarization: -14.13 SS G_CDS: -0.33 Total: -14.47 kcal Atomic # 9 Polarization: -8.49 SS G_CDS: 0.07 Total: -8.42 kcal Atomic # 14 Polarization: 17.42 SS G_CDS: -5.03 Total: 12.39 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -27.34 -3.12 -30.46 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000309507312.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.361 kcal (2) G-P(sol) polarization free energy of solvation -27.339 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.700 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.121 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.460 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.821 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds