Wall clock time and date at job start Mon Mar 30 2020 06:14:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35774 * 117.00524 * 2 1 4 4 N 1.32146 * 119.68467 * 359.97438 * 3 2 1 5 5 C 1.32237 * 122.33492 * 179.97438 * 4 3 2 6 6 C 1.50694 * 119.28638 * 179.97438 * 5 4 3 7 7 F 1.39894 * 109.47433 * 30.00263 * 6 5 4 8 8 F 1.39903 * 109.47158 * 150.00717 * 6 5 4 9 9 C 1.36373 * 121.42685 * 0.28481 * 5 4 3 10 10 C 1.41212 * 119.17429 * 359.43056 * 9 5 4 11 11 C 1.41246 * 121.03996 * 180.28583 * 10 9 5 12 12 H 1.07993 * 119.99874 * 204.14485 * 11 10 9 13 13 C 1.40028 * 119.99863 * 24.14641 * 11 10 9 14 14 N 1.30777 * 120.00104 * 14.24537 * 13 11 10 15 15 Si 1.86798 * 119.99835 * 194.25478 * 13 11 10 16 16 H 1.48496 * 109.47468 * 89.99790 * 15 13 11 17 17 H 1.48500 * 109.46935 * 210.00034 * 15 13 11 18 18 H 1.48501 * 109.47038 * 329.99528 * 15 13 11 19 19 C 1.39327 * 119.69424 * 179.97438 * 3 2 1 20 20 O 1.35705 * 120.73429 * 0.02562 * 19 3 2 21 21 C 1.42908 * 116.99800 * 90.00113 * 20 19 3 22 22 H 1.09001 * 109.47055 * 300.00593 * 1 2 3 23 23 H 1.09001 * 109.47090 * 60.00061 * 1 2 3 24 24 H 1.08999 * 109.47354 * 180.02562 * 1 2 3 25 25 H 1.09002 * 109.47592 * 270.00078 * 6 5 4 26 26 H 1.08004 * 120.41025 * 179.69952 * 9 5 4 27 27 H 0.96998 * 119.99632 * 179.97438 * 14 13 11 28 28 H 1.08993 * 109.47017 * 299.99663 * 21 20 19 29 29 H 1.08999 * 109.46732 * 59.99632 * 21 20 19 30 30 H 1.09002 * 109.47128 * 179.97438 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0455 1.2097 0.0000 4 7 1.3198 2.3141 -0.0005 5 6 1.8651 3.5187 0.0000 6 6 0.9717 4.7323 -0.0013 7 9 -0.2254 4.4309 0.6569 8 9 1.6145 5.7852 0.6587 9 6 3.2185 3.6866 -0.0048 10 6 4.0534 2.5478 0.0020 11 6 5.4600 2.6760 0.0034 12 1 6.0758 1.8733 -0.3743 13 6 6.0561 3.8440 0.4948 14 7 5.3519 4.6906 1.2001 15 14 7.8571 4.1928 0.1425 16 1 7.9742 4.9619 -1.1224 17 1 8.4355 4.9840 1.2582 18 1 8.5934 2.9099 0.0117 19 6 3.4372 1.2751 0.0005 20 8 4.1847 0.1424 0.0005 21 6 4.5426 -0.3987 -1.2728 22 1 -0.3633 0.5139 0.8899 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 0.7575 5.0248 -1.0292 26 1 3.6463 4.6783 -0.0092 27 1 5.7649 5.4995 1.5408 28 1 3.6387 -0.6444 -1.8301 29 1 5.1242 0.3362 -1.8293 30 1 5.1381 -1.3004 -1.1300 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000381261504.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:14:36 Heat of formation + Delta-G solvation = -151.240525 kcal Electronic energy + Delta-G solvation = -19792.185027 eV Core-core repulsion = 16223.939450 eV Total energy + Delta-G solvation = -3568.245577 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 259.081 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -48.26687 -46.28438 -39.45026 -37.13803 -36.51409 -34.23287 -30.65980 -29.95121 -27.28665 -26.43717 -25.81649 -24.37252 -21.71082 -20.86264 -18.23877 -17.08203 -16.83227 -16.44091 -16.16274 -15.84626 -15.61753 -15.19711 -14.65126 -14.18128 -13.82711 -13.21846 -13.03478 -12.86272 -12.66047 -12.47632 -12.08987 -11.90285 -11.70445 -11.42469 -11.27684 -11.01624 -10.79081 -10.57480 -10.28138 -10.20259 -9.66689 -9.22413 -8.26290 -8.19738 -7.30269 -7.03268 -4.82296 2.19585 2.60915 2.92634 2.97186 3.05121 3.69566 4.02771 4.26839 4.39499 4.72605 4.88210 5.28120 5.38617 5.64941 5.79725 5.88650 6.03419 6.06906 6.13200 6.26780 6.29680 6.57475 6.71883 6.93205 7.05543 7.21253 7.55992 8.02850 8.14276 8.31728 8.47475 8.85162 9.12926 9.82736 Molecular weight = 259.08amu Principal moments of inertia in cm(-1) A = 0.016405 B = 0.009936 C = 0.006378 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1706.423075 B = 2817.375537 C = 4388.841567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 O -0.313 6.313 3 C 0.320 3.680 4 N -0.596 5.596 5 C 0.059 3.941 6 C 0.331 3.669 7 F -0.201 7.201 8 F -0.197 7.197 9 C -0.185 4.185 10 C 0.130 3.870 11 C -0.417 4.417 12 H 0.091 0.909 13 C 0.072 3.928 14 N -0.766 5.766 15 Si 0.921 3.079 16 H -0.264 1.264 17 H -0.273 1.273 18 H -0.258 1.258 19 C -0.089 4.089 20 O -0.307 6.307 21 C 0.032 3.968 22 H 0.051 0.949 23 H 0.048 0.952 24 H 0.080 0.920 25 H 0.110 0.890 26 H 0.144 0.856 27 H 0.290 0.710 28 H 0.029 0.971 29 H 0.036 0.964 30 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.323 -0.626 -4.255 4.888 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 O -0.221 6.221 3 C 0.141 3.859 4 N -0.327 5.327 5 C -0.069 4.069 6 C 0.277 3.723 7 F -0.182 7.182 8 F -0.179 7.179 9 C -0.209 4.209 10 C 0.122 3.878 11 C -0.447 4.447 12 H 0.109 0.891 13 C -0.151 4.151 14 N -0.390 5.390 15 Si 0.744 3.256 16 H -0.189 1.189 17 H -0.198 1.198 18 H -0.181 1.181 19 C -0.138 4.138 20 O -0.221 6.221 21 C -0.064 4.064 22 H 0.070 0.930 23 H 0.067 0.933 24 H 0.098 0.902 25 H 0.127 0.873 26 H 0.162 0.838 27 H 0.102 0.898 28 H 0.048 0.952 29 H 0.055 0.945 30 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -3.062 -0.798 -3.921 5.038 hybrid contribution 1.226 0.529 -0.205 1.351 sum -1.836 -0.269 -4.126 4.524 Atomic orbital electron populations 1.22589 0.79582 1.01063 1.01767 1.86268 1.21004 1.25835 1.88967 1.19854 0.88243 0.83800 0.93992 1.66409 1.39729 0.97241 1.29357 1.20195 0.92320 0.90972 1.03412 1.19982 0.77259 0.83179 0.91891 1.92940 1.47559 1.93759 1.83944 1.92991 1.82285 1.58609 1.83977 1.21660 0.91072 1.01123 1.07005 1.17837 0.94160 0.88658 0.87147 1.19576 0.91050 1.00869 1.33184 0.89108 1.26137 1.01734 0.94797 0.92388 1.69761 1.38795 1.09105 1.21304 0.86078 0.80486 0.79804 0.79212 1.18868 1.19780 1.18126 1.18727 0.85477 0.86543 1.23053 1.86050 1.70319 1.39240 1.26505 1.22852 0.98456 0.97643 0.87427 0.93049 0.93325 0.90165 0.87282 0.83808 0.89845 0.95195 0.94486 0.90758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.80 10.38 101.05 1.05 1.85 16 2 O -0.31 -6.93 10.28 -33.26 -0.34 -7.27 16 3 C 0.32 7.87 7.51 -17.01 -0.13 7.74 16 4 N -0.60 -14.32 8.77 -9.78 -0.09 -14.41 16 5 C 0.06 1.38 6.54 -83.09 -0.54 0.84 16 6 C 0.33 6.50 5.71 36.00 0.21 6.70 16 7 F -0.20 -4.08 17.04 2.25 0.04 -4.04 16 8 F -0.20 -4.03 16.42 2.25 0.04 -4.00 16 9 C -0.18 -4.60 8.04 -39.12 -0.31 -4.91 16 10 C 0.13 3.38 5.62 -106.42 -0.60 2.78 16 11 C -0.42 -10.43 8.82 -37.77 -0.33 -10.77 16 12 H 0.09 2.20 7.33 -52.49 -0.38 1.82 16 13 C 0.07 1.67 5.25 -17.33 -0.09 1.58 16 14 N -0.77 -18.45 10.79 55.55 0.60 -17.85 16 15 Si 0.92 17.24 29.58 -169.99 -5.03 12.22 16 16 H -0.26 -4.82 7.11 56.52 0.40 -4.42 16 17 H -0.27 -5.01 7.11 56.52 0.40 -4.61 16 18 H -0.26 -4.81 7.11 56.52 0.40 -4.41 16 19 C -0.09 -2.27 5.82 -37.97 -0.22 -2.49 16 20 O -0.31 -7.41 9.63 -33.05 -0.32 -7.73 16 21 C 0.03 0.61 11.06 101.05 1.12 1.73 16 22 H 0.05 0.91 8.11 -51.93 -0.42 0.49 16 23 H 0.05 0.82 8.10 -51.93 -0.42 0.40 16 24 H 0.08 1.09 8.14 -51.93 -0.42 0.67 16 25 H 0.11 1.70 8.14 -51.93 -0.42 1.28 16 26 H 0.14 3.59 5.60 -52.48 -0.29 3.30 16 27 H 0.29 6.29 8.29 -40.82 -0.34 5.95 16 28 H 0.03 0.55 8.14 -51.93 -0.42 0.13 16 29 H 0.04 0.70 7.84 -51.93 -0.41 0.29 16 30 H 0.07 1.19 8.14 -51.93 -0.42 0.77 16 LS Contribution 276.41 15.07 4.17 4.17 Total: -1.00 -28.67 276.41 -3.54 -32.21 By element: Atomic # 1 Polarization: 4.41 SS G_CDS: -2.75 Total: 1.65 kcal Atomic # 6 Polarization: 4.90 SS G_CDS: 0.14 Total: 5.05 kcal Atomic # 7 Polarization: -32.77 SS G_CDS: 0.51 Total: -32.26 kcal Atomic # 8 Polarization: -14.34 SS G_CDS: -0.66 Total: -15.00 kcal Atomic # 9 Polarization: -8.11 SS G_CDS: 0.08 Total: -8.04 kcal Atomic # 14 Polarization: 17.24 SS G_CDS: -5.03 Total: 12.22 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -28.67 -3.54 -32.21 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000381261504.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.027 kcal (2) G-P(sol) polarization free energy of solvation -28.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -147.698 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.543 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.214 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.241 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds