Wall clock time and date at job start Mon Mar 30 2020 06:14:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35654 * 117.00345 * 2 1 4 4 N 1.31653 * 119.61444 * 359.97291 * 3 2 1 5 5 C 1.33796 * 121.49882 * 180.02562 * 4 3 2 6 6 C 1.41073 * 119.72908 * 180.02562 * 5 4 3 7 7 H 1.07999 * 120.00054 * 179.97438 * 6 5 4 8 8 C 1.39989 * 119.99792 * 0.02562 * 6 5 4 9 9 N 1.30791 * 119.99650 * 359.97438 * 8 6 5 10 10 Si 1.86793 * 119.99899 * 179.97438 * 8 6 5 11 11 H 1.48496 * 109.47167 * 89.99754 * 10 8 6 12 12 H 1.48499 * 109.47158 * 210.00211 * 10 8 6 13 13 H 1.48502 * 109.46990 * 329.99865 * 10 8 6 14 14 C 1.40734 * 120.54495 * 359.97438 * 5 4 3 15 15 C 1.38022 * 119.19281 * 359.78552 * 14 5 4 16 16 C 1.50701 * 120.69539 * 180.23498 * 15 14 5 17 17 F 1.39902 * 109.46813 * 30.24820 * 16 15 14 18 18 F 1.39901 * 109.47304 * 150.24497 * 16 15 14 19 19 C 1.39332 * 118.61210 * 0.47650 * 15 14 5 20 20 O 1.35715 * 120.31056 * 179.75361 * 19 15 14 21 21 C 1.42893 * 117.00103 * 269.72717 * 20 19 15 22 22 H 1.09003 * 109.47467 * 180.02562 * 1 2 3 23 23 H 1.09003 * 109.47191 * 300.00023 * 1 2 3 24 24 H 1.08995 * 109.47524 * 60.00307 * 1 2 3 25 25 H 0.97005 * 119.99750 * 179.97438 * 9 8 6 26 26 H 1.08004 * 120.40035 * 180.02562 * 14 5 4 27 27 H 1.09000 * 109.47017 * 270.25215 * 16 15 14 28 28 H 1.09005 * 109.47515 * 179.97438 * 21 20 19 29 29 H 1.08996 * 109.47255 * 299.99772 * 21 20 19 30 30 H 1.09004 * 109.47453 * 59.99455 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 7 1.3205 2.3080 -0.0005 5 6 1.8884 3.5194 -0.0011 6 6 1.0762 4.6729 -0.0011 7 1 1.5300 5.6529 -0.0011 8 6 -0.3180 4.5471 0.0000 9 7 -0.8675 3.3602 0.0005 10 14 -1.3935 6.0744 0.0007 11 1 -1.6795 6.4790 -1.3992 12 1 -2.6693 5.7811 0.7017 13 1 -0.6866 7.1772 0.7001 14 6 3.2895 3.6525 -0.0005 15 6 4.0736 2.5166 0.0051 16 6 5.5771 2.6198 0.0112 17 9 5.9615 3.7898 0.6748 18 9 6.1179 1.5106 0.6703 19 6 3.4461 1.2726 -0.0002 20 8 4.1837 0.1334 0.0001 21 6 4.5360 -0.4115 -1.2730 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3634 0.5138 0.8900 24 1 -0.3634 0.5137 -0.8899 25 1 -1.8336 3.2731 0.0016 26 1 3.7455 4.6315 -0.0005 27 1 5.9435 2.6470 -1.0150 28 1 5.1238 -1.3183 -1.1301 29 1 3.6297 -0.6496 -1.8298 30 1 5.1238 0.3179 -1.8305 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000390665253.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:14:48 Heat of formation + Delta-G solvation = -142.482336 kcal Electronic energy + Delta-G solvation = -19913.490936 eV Core-core repulsion = 16345.625143 eV Total energy + Delta-G solvation = -3567.865793 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 259.081 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -48.35029 -46.35628 -39.30105 -37.03149 -36.52644 -33.66440 -31.34844 -29.56889 -27.19550 -26.40838 -25.57926 -24.45622 -21.40697 -21.00728 -18.13020 -17.12086 -16.88740 -16.65846 -16.51469 -15.36085 -15.10075 -15.05231 -14.82238 -14.19702 -13.82150 -13.27937 -13.17360 -12.80726 -12.70435 -12.29941 -12.17765 -11.96870 -11.47882 -11.35476 -11.10057 -10.96726 -10.73775 -10.56043 -10.22359 -10.21239 -9.39522 -9.37122 -8.37683 -7.92951 -7.30478 -6.71551 -4.78990 2.29894 2.57962 2.95922 2.97589 3.00753 3.75263 4.07736 4.35919 4.43257 4.80227 4.97090 5.34581 5.40464 5.64565 5.85990 5.96370 6.00902 6.07918 6.12517 6.29058 6.45077 6.58765 6.65039 6.86592 7.01153 7.18791 7.38226 7.82257 8.16725 8.27943 8.46460 8.84748 9.70300 10.00630 Molecular weight = 259.08amu Principal moments of inertia in cm(-1) A = 0.021869 B = 0.008145 C = 0.006113 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1280.032208 B = 3436.681049 C = 4579.462761 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 O -0.318 6.318 3 C 0.336 3.664 4 N -0.517 5.517 5 C 0.277 3.723 6 C -0.408 4.408 7 H 0.092 0.908 8 C 0.066 3.934 9 N -0.706 5.706 10 Si 0.914 3.086 11 H -0.267 1.267 12 H -0.274 1.274 13 H -0.259 1.259 14 C -0.254 4.254 15 C -0.093 4.093 16 C 0.321 3.679 17 F -0.205 7.205 18 F -0.192 7.192 19 C -0.108 4.108 20 O -0.307 6.307 21 C 0.031 3.969 22 H 0.071 0.929 23 H 0.057 0.943 24 H 0.056 0.944 25 H 0.277 0.723 26 H 0.116 0.884 27 H 0.106 0.894 28 H 0.076 0.924 29 H 0.035 0.965 30 H 0.025 0.975 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.920 -1.398 -2.822 4.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.043 4.043 2 O -0.225 6.225 3 C 0.148 3.852 4 N -0.247 5.247 5 C 0.153 3.847 6 C -0.439 4.439 7 H 0.110 0.890 8 C -0.161 4.161 9 N -0.326 5.326 10 Si 0.738 3.262 11 H -0.192 1.192 12 H -0.199 1.199 13 H -0.183 1.183 14 C -0.276 4.276 15 C -0.099 4.099 16 C 0.267 3.733 17 F -0.187 7.187 18 F -0.174 7.174 19 C -0.156 4.156 20 O -0.221 6.221 21 C -0.064 4.064 22 H 0.089 0.911 23 H 0.076 0.924 24 H 0.074 0.926 25 H 0.088 0.912 26 H 0.134 0.866 27 H 0.124 0.876 28 H 0.094 0.906 29 H 0.053 0.947 30 H 0.044 0.956 Dipole moment (debyes) X Y Z Total from point charges 2.023 -1.931 -2.627 3.837 hybrid contribution 0.108 0.887 -0.222 0.920 sum 2.131 -1.044 -2.849 3.708 Atomic orbital electron populations 1.22574 0.78648 0.99990 1.03103 1.86148 1.21841 1.26185 1.88345 1.20422 0.87623 0.86110 0.91001 1.68439 1.35581 0.96649 1.24031 1.18130 0.88391 0.90064 0.88065 1.19692 0.90754 0.93089 1.40324 0.88979 1.26142 0.99068 0.97480 0.93439 1.70114 1.12025 1.23706 1.26758 0.86196 0.79139 0.81437 0.79427 1.19201 1.19924 1.18262 1.21426 0.94588 0.96277 1.15332 1.20281 0.92668 0.94099 1.02866 1.20065 0.90473 0.71006 0.91763 1.92949 1.92318 1.49516 1.83880 1.93005 1.87235 1.53384 1.83731 1.17607 0.86717 0.84904 1.26388 1.86172 1.70700 1.38854 1.26416 1.22868 0.98605 0.97483 0.87450 0.91090 0.92444 0.92560 0.91227 0.86643 0.87639 0.90575 0.94676 0.95625 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 1.05 10.38 101.05 1.05 2.10 16 2 O -0.32 -7.42 10.27 -32.97 -0.34 -7.76 16 3 C 0.34 8.48 7.52 -16.87 -0.13 8.35 16 4 N -0.52 -13.60 6.68 -11.03 -0.07 -13.68 16 5 C 0.28 7.16 6.55 -84.99 -0.56 6.61 16 6 C -0.41 -10.05 9.12 -37.85 -0.35 -10.40 16 7 H 0.09 2.09 7.85 -52.49 -0.41 1.68 16 8 C 0.07 1.53 5.50 -17.34 -0.10 1.43 16 9 N -0.71 -17.01 11.45 55.55 0.64 -16.37 16 10 Si 0.91 17.12 29.56 -169.99 -5.02 12.09 16 11 H -0.27 -4.95 7.11 56.52 0.40 -4.55 16 12 H -0.27 -5.06 7.11 56.52 0.40 -4.66 16 13 H -0.26 -4.80 7.11 56.52 0.40 -4.40 16 14 C -0.25 -5.98 9.19 -38.72 -0.36 -6.34 16 15 C -0.09 -2.09 5.76 -104.29 -0.60 -2.69 16 16 C 0.32 6.07 5.60 36.01 0.20 6.27 16 17 F -0.21 -3.93 16.56 2.25 0.04 -3.89 16 18 F -0.19 -3.86 15.44 2.25 0.03 -3.82 16 19 C -0.11 -2.58 5.70 -38.41 -0.22 -2.80 16 20 O -0.31 -6.84 8.28 -33.16 -0.27 -7.11 16 21 C 0.03 0.56 11.13 101.05 1.12 1.68 16 22 H 0.07 1.13 8.14 -51.93 -0.42 0.71 16 23 H 0.06 1.21 8.10 -51.93 -0.42 0.79 16 24 H 0.06 1.16 8.10 -51.93 -0.42 0.74 16 25 H 0.28 6.00 8.30 -40.82 -0.34 5.66 16 26 H 0.12 2.51 7.68 -52.48 -0.40 2.10 16 27 H 0.11 1.61 8.14 -51.93 -0.42 1.19 16 28 H 0.08 1.13 8.14 -51.93 -0.42 0.70 16 29 H 0.03 0.62 8.14 -51.93 -0.42 0.20 16 30 H 0.03 0.41 8.14 -51.93 -0.42 -0.01 16 LS Contribution 276.73 15.07 4.17 4.17 Total: -1.00 -28.33 276.73 -3.66 -31.99 By element: Atomic # 1 Polarization: 3.07 SS G_CDS: -2.90 Total: 0.16 kcal Atomic # 6 Polarization: 4.14 SS G_CDS: 0.08 Total: 4.21 kcal Atomic # 7 Polarization: -30.61 SS G_CDS: 0.56 Total: -30.05 kcal Atomic # 8 Polarization: -14.26 SS G_CDS: -0.61 Total: -14.87 kcal Atomic # 9 Polarization: -7.78 SS G_CDS: 0.07 Total: -7.71 kcal Atomic # 14 Polarization: 17.12 SS G_CDS: -5.02 Total: 12.09 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -28.33 -3.66 -31.99 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000390665253.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.489 kcal (2) G-P(sol) polarization free energy of solvation -28.331 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.821 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.662 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.993 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.482 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds