Wall clock time and date at job start Mon Mar 30 2020 07:14:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35964 * 116.99967 * 2 1 4 4 C 1.38820 * 120.02395 * 270.29480 * 3 2 1 5 5 F 1.35096 * 120.05988 * 359.97438 * 4 3 2 6 6 C 1.38722 * 119.87293 * 180.27148 * 4 3 2 7 7 O 1.35985 * 120.03876 * 179.70283 * 6 4 3 8 8 C 1.38837 * 119.92790 * 359.72766 * 6 4 3 9 9 Cl 1.73596 * 119.97678 * 179.97438 * 8 6 4 10 10 C 1.38256 * 120.04683 * 359.97438 * 8 6 4 11 11 C 1.38244 * 120.12294 * 0.02562 * 10 8 6 12 12 C 1.50699 * 119.96115 * 180.02562 * 11 10 8 13 13 C 1.50706 * 109.46817 * 265.00070 * 12 11 10 14 14 H 1.07995 * 120.00167 * 359.72198 * 13 12 11 15 15 C 1.37879 * 119.99394 * 179.97438 * 13 12 11 16 16 N 1.31514 * 120.00338 * 0.02562 * 15 13 12 17 17 Si 1.86800 * 119.99424 * 180.02562 * 15 13 12 18 18 H 1.48501 * 109.47474 * 90.00322 * 17 15 13 19 19 H 1.48507 * 109.46754 * 210.00056 * 17 15 13 20 20 H 1.48498 * 109.47278 * 329.99887 * 17 15 13 21 21 H 1.09002 * 109.47265 * 180.02562 * 1 2 3 22 22 H 1.09004 * 109.47440 * 300.00217 * 1 2 3 23 23 H 1.09002 * 109.47051 * 60.00062 * 1 2 3 24 24 H 0.96694 * 113.99884 * 270.02875 * 7 6 4 25 25 H 1.07999 * 119.93600 * 180.02562 * 10 8 6 26 26 H 1.09000 * 109.47247 * 145.00133 * 12 11 10 27 27 H 1.09001 * 109.47358 * 24.99560 * 12 11 10 28 28 H 0.96996 * 119.99730 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 2.3561 1.8332 -1.2019 5 9 2.0453 1.2353 -2.3728 6 6 2.9910 3.0666 -1.1983 7 8 3.3015 3.6758 -2.3737 8 6 3.3095 3.6781 0.0067 9 17 4.1046 5.2213 0.0128 10 6 2.9939 3.0590 1.2020 11 6 2.3612 1.8298 1.2007 12 6 2.0184 1.1585 2.5056 13 6 3.1136 0.1916 2.8760 14 1 3.9697 0.0717 2.2287 15 6 3.0198 -0.5436 4.0386 16 7 1.9746 -0.4015 4.8241 17 14 4.3776 -1.7414 4.4980 18 1 5.3995 -1.0411 5.3169 19 1 3.8023 -2.8655 5.2797 20 1 5.0102 -2.2701 3.2629 21 1 -0.3634 -1.0277 0.0005 22 1 -0.3634 0.5139 0.8900 23 1 -0.3633 0.5138 -0.8900 24 1 4.1765 3.4474 -2.7159 25 1 3.2421 3.5365 2.1383 26 1 1.0774 0.6186 2.4003 27 1 1.9196 1.9120 3.2870 28 1 1.9086 -0.9191 5.6418 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000216630071.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:14:51 Heat of formation + Delta-G solvation = -112.848454 kcal Electronic energy + Delta-G solvation = -17322.740586 eV Core-core repulsion = 14086.777527 eV Total energy + Delta-G solvation = -3235.963058 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 260.040 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -48.66913 -39.77829 -38.11172 -36.47430 -35.86264 -33.25993 -30.76113 -29.71327 -27.22493 -26.23899 -23.52718 -22.41531 -21.07421 -18.68648 -17.34243 -16.87438 -16.54239 -16.44566 -15.58128 -15.06818 -14.76827 -14.51599 -14.27427 -13.90251 -13.23870 -12.76649 -12.67961 -12.36612 -11.79463 -11.66071 -11.38534 -11.16725 -10.82693 -10.69409 -10.57854 -10.53790 -9.90705 -9.54627 -9.51572 -8.49175 -8.34890 -8.07198 -6.12128 -4.15263 1.09789 1.25524 2.17150 3.27766 3.34092 3.38066 3.49069 3.80942 4.34013 4.40665 4.49446 5.12363 5.23963 5.29110 5.55162 5.64105 5.69723 5.86381 5.95969 6.09110 6.35341 6.50049 6.75564 7.34674 7.48832 7.53732 7.81010 7.83696 8.17045 8.86916 9.48349 10.98141 Molecular weight = 260.04amu Principal moments of inertia in cm(-1) A = 0.020204 B = 0.007215 C = 0.005961 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1385.534167 B = 3880.118663 C = 4696.100180 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.309 6.309 3 C 0.078 3.922 4 C 0.064 3.936 5 F -0.127 7.127 6 C 0.060 3.940 7 O -0.478 6.478 8 C -0.038 4.038 9 Cl -0.059 7.059 10 C -0.100 4.100 11 C -0.020 4.020 12 C 0.054 3.946 13 C -0.507 4.507 14 H 0.058 0.942 15 C 0.062 3.938 16 N -0.894 5.894 17 Si 0.897 3.103 18 H -0.279 1.279 19 H -0.285 1.285 20 H -0.272 1.272 21 H 0.094 0.906 22 H 0.054 0.946 23 H 0.038 0.962 24 H 0.387 0.613 25 H 0.147 0.853 26 H 0.040 0.960 27 H 0.036 0.964 28 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.437 6.462 -9.695 11.659 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.225 6.225 3 C 0.033 3.967 4 C 0.044 3.956 5 F -0.106 7.106 6 C 0.013 3.987 7 O -0.287 6.287 8 C -0.065 4.065 9 Cl -0.030 7.030 10 C -0.119 4.119 11 C -0.021 4.021 12 C 0.018 3.982 13 C -0.545 4.545 14 H 0.076 0.924 15 C -0.140 4.140 16 N -0.533 5.533 17 Si 0.725 3.275 18 H -0.205 1.205 19 H -0.211 1.211 20 H -0.197 1.197 21 H 0.113 0.887 22 H 0.072 0.928 23 H 0.057 0.943 24 H 0.242 0.758 25 H 0.165 0.835 26 H 0.058 0.942 27 H 0.054 0.946 28 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -0.069 6.579 -9.527 11.578 hybrid contribution 1.079 -0.704 -0.041 1.289 sum 1.010 5.876 -9.568 11.274 Atomic orbital electron populations 1.22999 0.79117 1.03374 1.00340 1.86154 1.19604 1.22872 1.93896 1.18497 1.00383 0.87841 0.89988 1.18260 1.04392 0.91372 0.81621 1.91458 1.90980 1.82898 1.45247 1.17650 1.04209 0.91320 0.85506 1.84893 1.39557 1.69051 1.35173 1.21091 1.01984 0.89662 0.93760 1.98346 1.78368 1.27396 1.98875 1.20965 0.99115 0.95146 0.96650 1.21021 0.92305 0.91394 0.97348 1.18370 0.98306 0.95493 0.86068 1.20907 1.05171 1.22200 1.06220 0.92357 1.24948 0.95949 0.96935 0.96186 1.69936 1.28596 1.41494 1.13225 0.86501 0.81807 0.80635 0.78593 1.20544 1.21119 1.19709 0.88721 0.92774 0.94301 0.75788 0.83503 0.94241 0.94595 0.92729 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.58 10.80 101.05 1.09 1.67 15 2 O -0.31 -6.30 9.55 -19.63 -0.19 -6.49 15 3 C 0.08 1.55 5.70 -39.20 -0.22 1.33 15 4 C 0.06 1.16 7.32 -39.19 -0.29 0.87 15 5 F -0.13 -2.27 16.95 2.25 0.04 -2.23 15 6 C 0.06 0.98 6.70 -39.18 -0.26 0.72 15 7 O -0.48 -6.72 12.82 -19.69 -0.25 -6.97 15 8 C -0.04 -0.61 6.33 -39.35 -0.25 -0.86 15 9 Cl -0.06 -0.82 28.50 -51.86 -1.48 -2.30 15 10 C -0.10 -1.78 9.45 -39.57 -0.37 -2.15 15 11 C -0.02 -0.40 5.08 -104.46 -0.53 -0.93 15 12 C 0.05 1.30 4.82 -29.03 -0.14 1.16 15 13 C -0.51 -13.60 9.09 -34.44 -0.31 -13.92 15 14 H 0.06 1.57 7.74 -52.49 -0.41 1.17 15 15 C 0.06 1.68 5.46 -17.82 -0.10 1.58 15 16 N -0.89 -25.31 13.29 55.43 0.74 -24.57 15 17 Si 0.90 21.07 29.54 -169.99 -5.02 16.05 15 18 H -0.28 -6.45 7.11 56.52 0.40 -6.05 15 19 H -0.29 -6.65 7.11 56.52 0.40 -6.24 15 20 H -0.27 -6.37 7.11 56.52 0.40 -5.97 15 21 H 0.09 1.32 8.14 -51.93 -0.42 0.89 15 22 H 0.05 0.88 7.17 -51.93 -0.37 0.50 15 23 H 0.04 0.55 8.14 -51.93 -0.42 0.13 15 24 H 0.39 3.71 9.06 45.56 0.41 4.12 15 25 H 0.15 2.46 8.06 -52.49 -0.42 2.03 15 26 H 0.04 0.99 6.42 -51.93 -0.33 0.66 15 27 H 0.04 0.89 8.05 -51.93 -0.42 0.47 15 28 H 0.26 7.07 8.31 -40.82 -0.34 6.73 15 LS Contribution 273.80 15.07 4.13 4.13 Total: -1.00 -29.54 273.80 -4.94 -34.48 By element: Atomic # 1 Polarization: -0.04 SS G_CDS: -1.52 Total: -1.56 kcal Atomic # 6 Polarization: -9.15 SS G_CDS: -1.39 Total: -10.54 kcal Atomic # 7 Polarization: -25.31 SS G_CDS: 0.74 Total: -24.57 kcal Atomic # 8 Polarization: -13.02 SS G_CDS: -0.44 Total: -13.46 kcal Atomic # 9 Polarization: -2.27 SS G_CDS: 0.04 Total: -2.23 kcal Atomic # 14 Polarization: 21.07 SS G_CDS: -5.02 Total: 16.05 kcal Atomic # 17 Polarization: -0.82 SS G_CDS: -1.48 Total: -2.30 kcal Total LS contribution 4.13 Total: 4.13 kcal Total: -29.54 -4.94 -34.48 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000216630071.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.366 kcal (2) G-P(sol) polarization free energy of solvation -29.539 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.943 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.482 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.848 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds