Wall clock time and date at job start Mon Mar 30 2020 07:15:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.36043 * 116.99819 * 2 1 4 4 C 1.38549 * 120.04104 * 0.02562 * 3 2 1 5 5 C 1.38335 * 120.00764 * 179.97438 * 4 3 2 6 6 Cl 1.73600 * 119.94944 * 179.97438 * 5 4 3 7 7 C 1.38541 * 120.09671 * 359.97438 * 5 4 3 8 8 F 1.35100 * 119.95418 * 180.02562 * 7 5 4 9 9 C 1.38413 * 120.08824 * 0.02562 * 7 5 4 10 10 C 1.50695 * 120.00559 * 180.02562 * 9 7 5 11 11 C 1.50695 * 109.47164 * 90.00091 * 10 9 7 12 12 H 1.07997 * 120.00278 * 359.97438 * 11 10 9 13 13 C 1.37885 * 119.99692 * 179.97438 * 11 10 9 14 14 N 1.31521 * 119.99597 * 180.02562 * 13 11 10 15 15 Si 1.86792 * 120.00237 * 0.02562 * 13 11 10 16 16 H 1.48495 * 109.47182 * 90.00056 * 15 13 11 17 17 H 1.48505 * 109.46980 * 210.00300 * 15 13 11 18 18 H 1.48502 * 109.47094 * 329.99562 * 15 13 11 19 19 C 1.38560 * 119.98566 * 0.02562 * 9 7 5 20 20 O 1.36016 * 120.04925 * 180.02562 * 19 9 7 21 21 H 1.09000 * 109.46969 * 60.00204 * 1 2 3 22 22 H 1.09003 * 109.47170 * 179.97438 * 1 2 3 23 23 H 1.09004 * 109.47730 * 299.99908 * 1 2 3 24 24 H 1.07999 * 119.99806 * 0.25180 * 4 3 2 25 25 H 1.09002 * 109.47088 * 210.00567 * 10 9 7 26 26 H 1.09001 * 109.47366 * 329.99668 * 10 9 7 27 27 H 0.96994 * 119.99953 * 179.97438 * 14 13 11 28 28 H 0.96692 * 114.00552 * 89.98758 * 20 19 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0465 1.2122 0.0000 4 6 1.2927 2.3747 0.0005 5 6 1.9214 3.6069 0.0011 6 17 0.9755 5.0625 0.0011 7 6 3.3049 3.6810 0.0016 8 9 3.9159 4.8859 0.0027 9 6 4.0618 2.5222 0.0011 10 6 5.5665 2.6049 0.0022 11 6 6.0670 2.6311 1.4234 12 1 5.3657 2.5922 2.2438 13 6 7.4205 2.7048 1.6763 14 7 7.8574 2.7272 2.9167 15 14 8.6335 2.7728 0.2575 16 1 8.8785 4.1888 -0.1168 17 1 9.9128 2.1411 0.6693 18 1 8.0735 2.0424 -0.9080 19 6 3.4358 1.2861 -0.0005 20 8 4.1784 0.1465 -0.0005 21 1 -0.3633 0.5138 -0.8900 22 1 -0.3634 -1.0277 -0.0005 23 1 -0.3635 0.5138 0.8900 24 1 0.2142 2.3188 0.0051 25 1 5.9785 1.7367 -0.5122 26 1 5.8808 3.5139 -0.5106 27 1 8.8094 2.7786 3.0946 28 1 4.3923 -0.1836 0.8828 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260911517.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:15:10 Heat of formation + Delta-G solvation = -109.562792 kcal Electronic energy + Delta-G solvation = -17318.033663 eV Core-core repulsion = 14082.213081 eV Total energy + Delta-G solvation = -3235.820581 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 260.040 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -48.32822 -40.23124 -37.77527 -36.83789 -35.56686 -33.34615 -31.35212 -29.27390 -27.84858 -26.95470 -23.33621 -22.30740 -20.73424 -18.29458 -17.53158 -17.22790 -16.94682 -16.28134 -15.73226 -15.07996 -14.95252 -14.44754 -14.15734 -13.66882 -13.45655 -13.09343 -12.61910 -12.44839 -11.95294 -11.75197 -11.71951 -11.34319 -11.09342 -10.73320 -10.61001 -10.40166 -10.08875 -9.98508 -9.49160 -8.63990 -8.23620 -7.80995 -6.14357 -4.15381 1.14929 1.39800 2.12728 3.23105 3.28641 3.35608 3.39242 3.55906 4.34222 4.37727 4.63295 4.93280 4.98824 5.07559 5.17949 5.23751 5.38020 5.74038 5.77670 5.87472 6.12190 6.33134 6.77790 6.96349 7.15277 7.27838 7.56705 8.09840 8.36690 8.85739 9.44875 10.97947 Molecular weight = 260.04amu Principal moments of inertia in cm(-1) A = 0.020654 B = 0.007690 C = 0.006066 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1355.370421 B = 3640.186304 C = 4615.129530 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.302 6.302 3 C 0.101 3.899 4 C -0.185 4.185 5 C -0.045 4.045 6 Cl -0.060 7.060 7 C 0.091 3.909 8 F -0.119 7.119 9 C -0.043 4.043 10 C 0.018 3.982 11 C -0.518 4.518 12 H 0.073 0.927 13 C 0.076 3.924 14 N -0.895 5.895 15 Si 0.876 3.124 16 H -0.274 1.274 17 H -0.285 1.285 18 H -0.262 1.262 19 C 0.111 3.889 20 O -0.475 6.475 21 H 0.054 0.946 22 H 0.100 0.900 23 H 0.055 0.945 24 H 0.144 0.856 25 H 0.048 0.952 26 H 0.033 0.967 27 H 0.266 0.734 28 H 0.396 0.604 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.541 -2.532 -6.119 15.978 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.215 6.215 3 C 0.054 3.946 4 C -0.205 4.205 5 C -0.073 4.073 6 Cl -0.031 7.031 7 C 0.070 3.930 8 F -0.098 7.098 9 C -0.045 4.045 10 C -0.019 4.019 11 C -0.555 4.555 12 H 0.091 0.909 13 C -0.127 4.127 14 N -0.533 5.533 15 Si 0.703 3.297 16 H -0.200 1.200 17 H -0.211 1.211 18 H -0.187 1.187 19 C 0.064 3.936 20 O -0.285 6.285 21 H 0.073 0.927 22 H 0.118 0.882 23 H 0.074 0.926 24 H 0.162 0.838 25 H 0.066 0.934 26 H 0.051 0.949 27 H 0.076 0.924 28 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -14.382 -2.497 -6.607 16.023 hybrid contribution 0.430 0.560 0.003 0.706 sum -13.953 -1.937 -6.603 15.557 Atomic orbital electron populations 1.23088 0.78827 1.03901 1.01328 1.86187 1.20893 1.25573 1.88834 1.19209 0.91453 0.84390 0.99508 1.20576 1.00279 0.89406 1.10192 1.20576 0.89918 0.88456 1.08362 1.98350 1.71882 1.35833 1.97004 1.16928 0.87813 0.81693 1.06562 1.91521 1.83050 1.41439 1.93765 1.20490 0.99624 0.89386 0.95016 1.18751 0.84713 0.98793 0.99652 1.20749 0.92838 1.52348 0.89612 0.90868 1.24916 0.98133 0.94054 0.95585 1.69883 1.14851 1.49889 1.18706 0.86822 0.80772 0.78910 0.83232 1.20007 1.21090 1.18652 1.17234 0.85404 0.86620 1.04311 1.84746 1.71704 1.38140 1.33934 0.92694 0.88207 0.92624 0.83830 0.93372 0.94889 0.92416 0.74736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.22 9.81 101.05 0.99 1.21 15 2 O -0.30 -4.32 10.28 -34.44 -0.35 -4.67 15 3 C 0.10 1.63 6.70 -39.14 -0.26 1.37 15 4 C -0.19 -2.73 8.82 -39.43 -0.35 -3.07 15 5 C -0.05 -0.76 6.32 -39.43 -0.25 -1.01 15 6 Cl -0.06 -0.88 28.61 -51.86 -1.48 -2.36 15 7 C 0.09 1.80 7.21 -39.41 -0.28 1.52 15 8 F -0.12 -2.53 16.03 2.25 0.04 -2.50 15 9 C -0.04 -0.91 5.09 -104.44 -0.53 -1.44 15 10 C 0.02 0.43 3.77 -29.04 -0.11 0.32 15 11 C -0.52 -14.27 9.65 -34.44 -0.33 -14.60 15 12 H 0.07 2.18 7.98 -52.49 -0.42 1.76 15 13 C 0.08 2.14 5.47 -17.81 -0.10 2.04 15 14 N -0.90 -26.81 13.96 55.43 0.77 -26.03 15 15 Si 0.88 21.20 27.47 -169.99 -4.67 16.53 15 16 H -0.27 -6.59 7.11 56.52 0.40 -6.19 15 17 H -0.29 -6.82 7.11 56.52 0.40 -6.41 15 18 H -0.26 -6.10 6.54 56.52 0.37 -5.73 15 19 C 0.11 2.09 6.69 -39.14 -0.26 1.83 15 20 O -0.48 -8.73 12.33 -34.36 -0.42 -9.16 15 21 H 0.05 0.45 7.67 -51.93 -0.40 0.05 15 22 H 0.10 0.69 8.14 -51.93 -0.42 0.27 15 23 H 0.06 0.46 7.66 -51.93 -0.40 0.06 15 24 H 0.14 1.65 6.29 -52.49 -0.33 1.32 15 25 H 0.05 1.15 6.58 -51.93 -0.34 0.81 15 26 H 0.03 0.80 7.06 -51.93 -0.37 0.43 15 27 H 0.27 7.46 8.31 -40.82 -0.34 7.12 15 28 H 0.40 6.10 9.06 45.56 0.41 6.52 15 LS Contribution 267.71 15.07 4.03 4.03 Total: -1.00 -31.01 267.71 -5.00 -36.01 By element: Atomic # 1 Polarization: 1.42 SS G_CDS: -1.43 Total: -0.01 kcal Atomic # 6 Polarization: -10.36 SS G_CDS: -1.48 Total: -11.84 kcal Atomic # 7 Polarization: -26.81 SS G_CDS: 0.77 Total: -26.03 kcal Atomic # 8 Polarization: -13.05 SS G_CDS: -0.78 Total: -13.83 kcal Atomic # 9 Polarization: -2.53 SS G_CDS: 0.04 Total: -2.50 kcal Atomic # 14 Polarization: 21.20 SS G_CDS: -4.67 Total: 16.53 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.48 Total: -2.36 kcal Total LS contribution 4.03 Total: 4.03 kcal Total: -31.01 -5.00 -36.01 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260911517.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.555 kcal (2) G-P(sol) polarization free energy of solvation -31.008 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.563 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.000 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.008 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.563 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds