Wall clock time and date at job start Mon Mar 30 2020 06:48:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.39785 * 120.07082 * 47.16478 * 3 2 1 5 5 C 1.37693 * 119.96292 * 179.74479 * 4 3 2 6 6 C 1.39103 * 120.09697 * 0.54875 * 5 4 3 7 7 N 1.39347 * 119.92749 * 179.72467 * 6 5 4 8 8 C 1.46900 * 110.99852 * 62.89694 * 7 6 5 9 9 C 1.50705 * 109.46897 * 170.00324 * 8 7 6 10 10 H 1.08001 * 119.99821 * 359.97438 * 9 8 7 11 11 C 1.37868 * 120.00101 * 179.97438 * 9 8 7 12 12 N 1.31515 * 120.00190 * 179.97438 * 11 9 8 13 13 Si 1.86808 * 120.00114 * 359.72592 * 11 9 8 14 14 H 1.48494 * 109.47199 * 89.99340 * 13 11 9 15 15 H 1.48495 * 109.47101 * 210.00006 * 13 11 9 16 16 H 1.48505 * 109.46602 * 329.99570 * 13 11 9 17 17 C 1.46899 * 110.99516 * 298.94292 * 7 6 5 18 18 C 1.53001 * 117.50127 * 271.24830 * 17 7 6 19 19 C 1.53005 * 117.49478 * 202.62476 * 17 7 6 20 20 C 1.39338 * 120.14396 * 359.45298 * 6 5 4 21 21 F 1.35091 * 119.98494 * 180.25050 * 20 6 5 22 22 C 1.37832 * 120.03414 * 0.26619 * 20 6 5 23 23 H 1.08005 * 120.02047 * 0.02562 * 4 3 2 24 24 H 1.07997 * 119.95580 * 180.27387 * 5 4 3 25 25 H 1.08999 * 109.47049 * 50.00094 * 8 7 6 26 26 H 1.09000 * 109.47153 * 289.99924 * 8 7 6 27 27 H 0.97000 * 120.00284 * 180.02562 * 12 11 9 28 28 H 1.09004 * 115.55542 * 56.96350 * 17 7 6 29 29 H 1.08999 * 117.49263 * 0.02562 * 18 17 7 30 30 H 1.08995 * 117.50004 * 145.02320 * 18 17 7 31 31 H 1.08997 * 117.49766 * 214.97914 * 19 17 7 32 32 H 1.08995 * 117.49711 * 0.02562 * 19 17 7 33 33 H 1.08003 * 120.05077 * 179.97438 * 22 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2688 -0.8215 -0.8871 5 6 4.6457 -0.8152 -0.8888 6 6 5.3407 -0.0003 -0.0012 7 7 6.7342 -0.0011 -0.0020 8 6 7.2600 0.4755 -1.2882 9 6 8.7466 0.6947 -1.1729 10 1 9.2502 0.4999 -0.2376 11 6 9.4636 1.1439 -2.2614 12 7 10.7608 1.3357 -2.1607 13 14 8.5939 1.4735 -3.8815 14 1 8.1317 2.8842 -3.9171 15 1 9.5333 1.2317 -5.0058 16 1 7.4251 0.5663 -4.0092 17 6 7.2600 -1.3343 0.3204 18 6 7.4863 -1.6665 1.7966 19 6 8.6830 -1.4169 0.8765 20 6 4.6465 0.8208 0.8850 21 9 5.3247 1.6147 1.7422 22 6 3.2682 0.8234 0.8876 23 1 2.7306 -1.4580 -1.5739 24 1 5.1870 -1.4472 -1.5773 25 1 6.7738 1.4141 -1.5542 26 1 7.0612 -0.2681 -2.0600 27 1 11.2653 1.6520 -2.9264 28 1 6.9271 -2.1415 -0.3322 29 1 7.2445 -0.8959 2.5286 30 1 7.3020 -2.6923 2.1156 31 1 9.2860 -2.2785 0.5902 32 1 9.2287 -0.4819 1.0035 33 1 2.7298 1.4595 1.5746 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042549478.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:48:51 Heat of formation + Delta-G solvation = 57.178528 kcal Electronic energy + Delta-G solvation = -18752.018410 eV Core-core repulsion = 15693.986970 eV Total energy + Delta-G solvation = -3058.031440 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 260.102 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -48.55490 -39.78959 -37.77866 -36.29703 -34.00920 -32.61412 -30.81030 -29.96859 -27.31746 -23.69159 -22.67854 -22.11140 -21.75627 -20.03893 -19.17298 -17.40657 -16.57605 -16.00368 -15.89664 -15.53073 -14.95429 -14.37335 -14.17198 -14.02665 -13.96906 -13.73172 -13.40995 -12.99729 -12.66561 -12.24423 -12.18157 -12.06552 -11.66094 -11.54336 -11.02429 -10.86842 -10.68165 -10.09120 -9.96565 -9.48409 -9.11525 -9.03538 -8.63711 -8.53734 -7.89731 -6.11586 -4.10338 0.56025 1.11886 2.48518 2.75364 3.22535 3.29322 3.31481 3.62536 3.65840 4.10117 4.33720 4.39906 4.46168 4.71298 4.86258 5.15263 5.18425 5.36908 5.48401 5.58497 5.67235 5.75062 5.93557 6.03517 6.09089 6.17599 6.23771 6.52173 6.58282 6.67755 6.78882 6.93361 7.30248 7.46728 7.58083 7.88587 8.53283 8.98769 9.47912 11.00073 Molecular weight = 260.10amu Principal moments of inertia in cm(-1) A = 0.020545 B = 0.006488 C = 0.005620 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1362.543603 B = 4314.325477 C = 4981.137027 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.424 5.424 2 C 0.264 3.736 3 C -0.024 4.024 4 C -0.070 4.070 5 C -0.129 4.129 6 C 0.118 3.882 7 N -0.474 5.474 8 C 0.172 3.828 9 C -0.515 4.515 10 H 0.097 0.903 11 C 0.073 3.927 12 N -0.896 5.896 13 Si 0.867 3.133 14 H -0.275 1.275 15 H -0.285 1.285 16 H -0.268 1.268 17 C 0.023 3.977 18 C -0.185 4.185 19 C -0.136 4.136 20 C 0.119 3.881 21 F -0.119 7.119 22 C -0.105 4.105 23 H 0.135 0.865 24 H 0.140 0.860 25 H 0.027 0.973 26 H -0.002 1.002 27 H 0.264 0.736 28 H 0.080 0.920 29 H 0.094 0.906 30 H 0.085 0.915 31 H 0.088 0.912 32 H 0.118 0.882 33 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.087 -5.371 4.216 13.020 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.099 5.099 2 C -0.051 4.051 3 C -0.028 4.028 4 C -0.092 4.092 5 C -0.149 4.149 6 C 0.021 3.979 7 N -0.196 5.196 8 C 0.048 3.952 9 C -0.553 4.553 10 H 0.114 0.886 11 C -0.129 4.129 12 N -0.535 5.535 13 Si 0.694 3.306 14 H -0.201 1.201 15 H -0.211 1.211 16 H -0.193 1.193 17 C -0.084 4.084 18 C -0.223 4.223 19 C -0.173 4.173 20 C 0.098 3.902 21 F -0.097 7.097 22 C -0.127 4.127 23 H 0.153 0.847 24 H 0.158 0.842 25 H 0.045 0.955 26 H 0.016 0.984 27 H 0.074 0.926 28 H 0.098 0.902 29 H 0.112 0.888 30 H 0.103 0.897 31 H 0.106 0.894 32 H 0.136 0.864 33 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -12.456 -4.950 4.491 14.136 hybrid contribution -0.055 -0.081 -1.558 1.561 sum -12.512 -5.031 2.933 13.801 Atomic orbital electron populations 1.81245 1.11983 1.08425 1.08294 1.25570 0.92450 0.93519 0.93526 1.15634 0.84201 1.01979 1.00937 1.21042 0.93896 0.97212 0.97026 1.21691 0.93922 1.00045 0.99250 1.19376 0.91834 0.93677 0.93010 1.59325 1.00372 1.23554 1.36330 1.20290 0.97497 0.94373 0.83002 1.21203 0.89477 1.44451 1.00152 0.88585 1.24839 0.94710 0.95082 0.98264 1.69862 1.06238 1.46314 1.31058 0.86993 0.79922 0.79259 0.84397 1.20110 1.21112 1.19275 1.22069 1.01567 0.89147 0.95640 1.23092 1.05021 1.01147 0.93046 1.23090 0.90123 1.03780 1.00280 1.17325 0.88575 0.93036 0.91261 1.91544 1.80009 1.70970 1.67178 1.20968 0.92208 0.99815 0.99679 0.84708 0.84197 0.95471 0.98421 0.92555 0.90210 0.88788 0.89668 0.89392 0.86417 0.83819 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -5.82 18.54 41.84 0.78 -5.04 16 2 C 0.26 3.13 15.33 -22.47 -0.34 2.79 16 3 C -0.02 -0.27 5.74 -106.80 -0.61 -0.88 16 4 C -0.07 -0.76 9.74 -39.20 -0.38 -1.14 16 5 C -0.13 -1.69 8.65 -39.46 -0.34 -2.03 16 6 C 0.12 1.87 4.68 -83.71 -0.39 1.48 16 7 N -0.47 -9.04 4.41 -164.83 -0.73 -9.77 16 8 C 0.17 3.81 3.41 -4.97 -0.02 3.80 16 9 C -0.51 -13.43 8.90 -34.44 -0.31 -13.74 16 10 H 0.10 2.65 4.86 -52.49 -0.26 2.40 16 11 C 0.07 1.99 5.47 -17.82 -0.10 1.89 16 12 N -0.90 -26.01 13.96 55.43 0.77 -25.24 16 13 Si 0.87 20.31 27.47 -169.99 -4.67 15.64 16 14 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 15 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 16 H -0.27 -5.95 6.54 56.52 0.37 -5.58 16 17 C 0.02 0.39 4.43 -67.71 -0.30 0.09 16 18 C -0.19 -2.79 10.46 -26.73 -0.28 -3.07 16 19 C -0.14 -2.39 9.09 -26.72 -0.24 -2.63 16 20 C 0.12 1.75 7.30 -39.32 -0.29 1.46 16 21 F -0.12 -1.97 17.07 2.25 0.04 -1.93 16 22 C -0.10 -1.22 9.72 -39.14 -0.38 -1.60 16 23 H 0.14 1.11 8.06 -52.48 -0.42 0.69 16 24 H 0.14 1.76 7.29 -52.49 -0.38 1.38 16 25 H 0.03 0.62 7.49 -51.93 -0.39 0.23 16 26 H 0.00 -0.04 6.64 -51.93 -0.34 -0.39 16 27 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 28 H 0.08 1.27 7.52 -51.93 -0.39 0.88 16 29 H 0.09 1.47 8.14 -51.93 -0.42 1.05 16 30 H 0.08 1.08 8.14 -51.93 -0.42 0.66 16 31 H 0.09 1.42 8.14 -51.93 -0.42 1.00 16 32 H 0.12 2.43 5.85 -51.93 -0.30 2.13 16 33 H 0.14 1.36 8.06 -52.48 -0.42 0.94 16 LS Contribution 293.63 15.07 4.42 4.42 Total: -1.00 -28.83 293.63 -6.71 -35.54 By element: Atomic # 1 Polarization: 3.31 SS G_CDS: -3.35 Total: -0.04 kcal Atomic # 6 Polarization: -9.59 SS G_CDS: -3.98 Total: -13.58 kcal Atomic # 7 Polarization: -40.88 SS G_CDS: 0.82 Total: -40.06 kcal Atomic # 9 Polarization: -1.97 SS G_CDS: 0.04 Total: -1.93 kcal Atomic # 14 Polarization: 20.31 SS G_CDS: -4.67 Total: 15.64 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -28.83 -6.71 -35.54 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042549478.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.723 kcal (2) G-P(sol) polarization free energy of solvation -28.830 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.893 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.714 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.544 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.179 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds