Wall clock time and date at job start Mon Mar 30 2020 07:21:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.29470 * 1 3 3 Si 1.86799 * 120.00168 * 2 1 4 4 H 1.48502 * 109.47470 * 179.97438 * 3 2 1 5 5 H 1.48501 * 109.47434 * 300.00518 * 3 2 1 6 6 H 1.48507 * 109.47129 * 59.99967 * 3 2 1 7 7 C 1.46609 * 120.00144 * 180.02562 * 2 1 3 8 8 H 1.08002 * 120.00031 * 199.86970 * 7 2 1 9 9 C 1.40004 * 119.99970 * 19.86852 * 7 2 1 10 10 C 1.41551 * 120.32771 * 44.36005 * 9 7 2 11 11 Cl 1.73601 * 120.17294 * 359.97438 * 10 9 7 12 12 C 1.37603 * 119.65227 * 179.97438 * 10 9 7 13 13 C 1.38735 * 120.33601 * 359.97438 * 12 10 9 14 14 N 1.48009 * 119.65887 * 180.02562 * 13 12 10 15 15 O 1.31697 * 120.00459 * 359.97438 * 14 13 12 16 16 O 1.31700 * 119.99844 * 180.02562 * 14 13 12 17 17 C 1.38730 * 120.67764 * 0.02562 * 13 12 10 18 18 C 1.37603 * 120.33659 * 359.97438 * 17 13 12 19 19 Cl 1.73604 * 120.17437 * 180.02562 * 18 17 13 20 20 H 0.97001 * 119.99989 * 2.38507 * 1 2 3 21 21 H 1.08000 * 119.82749 * 180.26465 * 12 10 9 22 22 H 1.08000 * 119.83326 * 179.97438 * 17 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.2947 0.0000 0.0000 3 14 2.2287 1.6177 0.0000 4 1 3.6888 1.3464 0.0006 5 1 1.8700 2.3965 -1.2124 6 1 1.8700 2.3964 1.2125 7 6 2.0278 -1.2697 -0.0006 8 1 3.0596 -1.2976 0.3173 9 6 1.3903 -2.4459 -0.4132 10 6 0.5822 -2.4510 -1.5754 11 17 0.3742 -0.9964 -2.4998 12 6 -0.0374 -3.6150 -1.9685 13 6 0.1270 -4.7795 -1.2325 14 7 -0.5461 -6.0232 -1.6694 15 8 -1.2968 -6.0206 -2.7514 16 8 -0.3950 -7.1323 -0.9755 17 6 0.9157 -4.7901 -0.0913 18 6 1.5482 -3.6419 0.3271 19 17 2.5348 -3.6602 1.7554 20 1 -0.4850 0.8393 -0.0350 21 1 -0.6511 -3.6232 -2.8572 22 1 1.0340 -5.7042 0.4716 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000021987896.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:21:45 Heat of formation + Delta-G solvation = 10.830809 kcal Electronic energy + Delta-G solvation = -14812.418983 eV Core-core repulsion = 11808.896429 eV Total energy + Delta-G solvation = -3003.522554 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 260.975 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -38.84158 -37.21409 -35.85999 -35.23328 -34.47126 -33.20852 -31.12313 -29.91926 -27.23420 -24.16962 -21.96484 -21.23056 -18.46596 -17.64239 -16.97966 -16.01937 -14.81786 -14.79610 -14.75669 -14.27410 -13.57911 -13.15394 -12.94196 -12.06469 -11.94026 -11.62429 -11.47178 -11.00754 -10.88130 -10.51900 -10.34984 -10.23553 -10.09403 -9.94596 -9.69465 -9.49426 -8.33904 -8.12064 -7.75989 -5.39695 0.42055 1.94553 2.11642 2.26180 2.59322 2.63116 2.68313 2.98755 3.23067 3.28813 3.67209 4.34915 5.52553 5.69552 5.78002 5.99809 6.02150 6.16860 6.60670 6.75355 6.76343 7.11134 7.36546 7.48475 7.67830 8.02960 9.06464 Molecular weight = 260.97amu Principal moments of inertia in cm(-1) A = 0.023463 B = 0.008753 C = 0.006630 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1193.083444 B = 3198.172483 C = 4222.493158 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.686 5.686 2 C 0.066 3.934 3 Si 0.921 3.079 4 H -0.246 1.246 5 H -0.259 1.259 6 H -0.262 1.262 7 C -0.348 4.348 8 H 0.116 0.884 9 C 0.108 3.892 10 C -0.077 4.077 11 Cl -0.068 7.068 12 C -0.020 4.020 13 C -0.115 4.115 14 N 0.039 4.961 15 O -0.277 6.277 16 O -0.278 6.278 17 C -0.014 4.014 18 C -0.105 4.105 19 Cl -0.075 7.075 20 H 0.308 0.692 21 H 0.135 0.865 22 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.096 6.212 1.331 7.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.303 5.303 2 C -0.169 4.169 3 Si 0.741 3.259 4 H -0.168 1.168 5 H -0.183 1.183 6 H -0.187 1.187 7 C -0.371 4.371 8 H 0.133 0.867 9 C 0.103 3.897 10 C -0.107 4.107 11 Cl -0.039 7.039 12 C -0.041 4.041 13 C -0.213 4.213 14 N 0.479 4.521 15 O -0.444 6.444 16 O -0.444 6.444 17 C -0.035 4.035 18 C -0.134 4.134 19 Cl -0.047 7.047 20 H 0.122 0.878 21 H 0.153 0.847 22 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 4.062 6.724 1.512 8.000 hybrid contribution -0.070 0.393 -0.103 0.412 sum 3.992 7.117 1.408 8.280 Atomic orbital electron populations 1.69053 1.09207 1.33156 1.18909 1.27587 0.94854 1.02402 0.92091 0.85955 0.81656 0.78363 0.79877 1.16842 1.18316 1.18657 1.21450 0.98758 0.89696 1.27192 0.86661 1.17258 0.90596 0.92040 0.89836 1.20412 1.07888 0.86444 0.95940 1.98256 1.96262 1.37407 1.72002 1.20234 0.95725 0.89503 0.98592 1.19066 1.14234 0.83389 1.04633 1.49944 0.98680 1.03268 1.00232 1.96147 1.40098 1.94396 1.13717 1.96144 1.73098 1.19624 1.55566 1.20221 0.92639 0.97587 0.93018 1.20404 1.05488 0.94748 0.92794 1.98272 1.69293 1.98706 1.38395 0.87820 0.84712 0.84589 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 37. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.69 -13.29 11.21 55.99 0.63 -12.66 14 2 C 0.07 1.21 3.95 -15.17 -0.06 1.15 14 3 Si 0.92 13.94 29.68 -169.99 -5.05 8.90 14 4 H -0.25 -3.67 7.11 56.52 0.40 -3.27 14 5 H -0.26 -3.92 7.11 56.52 0.40 -3.52 14 6 H -0.26 -3.90 7.11 56.52 0.40 -3.50 14 7 C -0.35 -6.86 8.08 -35.55 -0.29 -7.15 14 8 H 0.12 2.14 7.82 -52.49 -0.41 1.73 14 9 C 0.11 2.28 5.33 -106.71 -0.57 1.71 14 10 C -0.08 -1.63 5.99 -38.55 -0.23 -1.86 14 11 Cl -0.07 -1.31 24.89 -51.86 -1.29 -2.60 14 12 C -0.02 -0.43 9.33 -39.63 -0.37 -0.80 14 13 C -0.12 -2.60 6.91 -79.59 -0.55 -3.15 14 14 N 0.04 0.96 4.98 34.14 0.17 1.13 14 15 O -0.28 -6.94 19.12 -31.57 -0.60 -7.54 14 16 O -0.28 -6.92 19.12 -31.57 -0.60 -7.52 14 17 C -0.01 -0.30 9.33 -39.63 -0.37 -0.67 14 18 C -0.10 -2.15 6.39 -38.55 -0.25 -2.40 14 19 Cl -0.08 -1.35 27.96 -51.86 -1.45 -2.80 14 20 H 0.31 5.26 8.27 -40.82 -0.34 4.93 14 21 H 0.14 2.79 7.55 -52.49 -0.40 2.40 14 22 H 0.14 2.72 7.55 -52.49 -0.40 2.33 14 LS Contribution 244.78 15.07 3.69 3.69 Total: -1.00 -23.96 244.78 -7.53 -31.48 By element: Atomic # 1 Polarization: 1.43 SS G_CDS: -0.34 Total: 1.09 kcal Atomic # 6 Polarization: -10.48 SS G_CDS: -2.68 Total: -13.16 kcal Atomic # 7 Polarization: -12.33 SS G_CDS: 0.80 Total: -11.53 kcal Atomic # 8 Polarization: -13.86 SS G_CDS: -1.21 Total: -15.06 kcal Atomic # 14 Polarization: 13.94 SS G_CDS: -5.05 Total: 8.90 kcal Atomic # 17 Polarization: -2.66 SS G_CDS: -2.74 Total: -5.40 kcal Total LS contribution 3.69 Total: 3.69 kcal Total: -23.96 -7.53 -31.48 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000021987896.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.315 kcal (2) G-P(sol) polarization free energy of solvation -23.959 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.356 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.484 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds