Wall clock time and date at job start Mon Mar 30 2020 06:38:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31164 * 1 3 3 Cl 1.73599 * 119.99815 * 2 1 4 4 C 1.50699 * 119.99993 * 179.97438 * 2 1 3 5 5 N 1.46494 * 109.46986 * 264.99823 * 4 2 1 6 6 C 1.37858 * 126.53450 * 90.02992 * 5 4 2 7 7 C 1.40185 * 125.30580 * 359.95750 * 6 5 4 8 8 H 1.08001 * 119.99607 * 354.66852 * 7 6 5 9 9 C 1.40339 * 119.99999 * 174.66671 * 7 6 5 10 10 N 1.30588 * 120.00198 * 6.07952 * 9 7 6 11 11 Si 1.86803 * 120.00094 * 186.08230 * 9 7 6 12 12 H 1.48494 * 109.47327 * 94.98211 * 11 9 7 13 13 H 1.48499 * 109.46935 * 214.98303 * 11 9 7 14 14 H 1.48500 * 109.47205 * 334.97907 * 11 9 7 15 15 N 1.32468 * 109.38564 * 179.97438 * 6 5 4 16 16 C 1.33970 * 109.78558 * 359.97438 * 15 6 5 17 17 C 1.40542 * 133.19603 * 180.02562 * 16 15 6 18 18 C 1.36358 * 119.84454 * 179.97438 * 17 16 15 19 19 C 1.39037 * 120.76052 * 0.02562 * 18 17 16 20 20 C 1.37965 * 120.57698 * 0.02562 * 19 18 17 21 21 C 1.37960 * 126.53917 * 269.71134 * 5 4 2 22 22 H 1.07994 * 119.99709 * 180.02562 * 1 2 3 23 23 H 1.07999 * 119.99816 * 359.97438 * 1 2 3 24 24 H 1.08994 * 109.46837 * 25.00247 * 4 2 1 25 25 H 1.09004 * 109.46882 * 145.00288 * 4 2 1 26 26 H 0.97000 * 119.99978 * 179.97438 * 10 9 7 27 27 H 1.07994 * 120.07253 * 359.97438 * 17 16 15 28 28 H 1.07995 * 119.61502 * 180.02562 * 18 17 16 29 29 H 1.08004 * 119.70838 * 180.02562 * 19 18 17 30 30 H 1.07998 * 120.11949 * 179.97438 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3116 0.0000 0.0000 3 17 2.1796 1.5034 0.0000 4 6 2.0651 -1.3051 0.0006 5 7 2.4136 -1.6671 1.3767 6 6 1.6534 -2.4221 2.2442 7 6 0.4002 -2.9774 1.9503 8 1 -0.0815 -2.7554 1.0095 9 6 -0.2282 -3.8219 2.8784 10 7 0.2957 -3.9963 4.0618 11 14 -1.8143 -4.6965 2.4211 12 1 -1.5019 -6.0607 1.9248 13 1 -2.6889 -4.7931 3.6173 14 1 -2.5129 -3.9308 1.3577 15 7 2.2916 -2.5407 3.3989 16 6 3.4609 -1.8896 3.3398 17 6 4.5037 -1.6990 4.2626 18 6 5.5995 -0.9695 3.9071 19 6 5.6996 -0.4087 2.6388 20 6 4.6900 -0.5795 1.7142 21 6 3.5677 -1.3227 2.0495 22 1 -0.5399 -0.9353 0.0004 23 1 -0.5400 0.9353 0.0004 24 1 1.4402 -2.0855 -0.4334 25 1 2.9759 -1.1990 -0.5889 26 1 -0.1389 -4.5797 4.7034 27 1 4.4371 -2.1294 5.2508 28 1 6.3988 -0.8258 4.6190 29 1 6.5755 0.1656 2.3752 30 1 4.7753 -0.1403 0.7313 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000110858842.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:28 Heat of formation + Delta-G solvation = 75.370800 kcal Electronic energy + Delta-G solvation = -17077.079753 eV Core-core repulsion = 14285.028991 eV Total energy + Delta-G solvation = -2792.050762 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.41595 -36.74670 -36.05131 -34.25079 -33.45511 -31.41863 -29.16722 -28.65716 -25.99781 -25.66835 -21.43120 -20.86064 -20.04837 -19.32440 -17.05193 -16.27404 -15.99263 -15.48503 -14.87537 -14.39148 -14.04570 -13.30240 -12.99490 -12.93356 -12.72225 -11.97228 -11.86143 -11.69556 -11.48190 -11.44494 -11.00315 -10.82022 -10.59104 -10.44597 -10.34568 -10.26340 -9.40621 -9.03609 -8.95332 -7.92540 -7.25559 -6.88497 -6.72351 -4.67451 2.06244 2.26496 2.51006 2.72252 2.95398 2.98216 3.01590 3.75167 4.08065 4.11999 4.80420 5.07956 5.30713 5.49930 5.66218 5.77895 5.84284 5.87516 6.05942 6.31762 6.38831 6.47605 6.56244 6.71932 6.83860 6.95248 7.24805 7.43574 7.61822 7.69647 7.89682 7.93252 8.28874 8.58666 8.96262 9.91669 10.17026 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.016403 B = 0.009228 C = 0.006198 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1706.566079 B = 3033.375383 C = 4516.490107 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.087 4.087 3 Cl -0.094 7.094 4 C 0.171 3.829 5 N -0.535 5.535 6 C 0.422 3.578 7 C -0.441 4.441 8 H 0.086 0.914 9 C 0.078 3.922 10 N -0.714 5.714 11 Si 0.915 3.085 12 H -0.268 1.268 13 H -0.274 1.274 14 H -0.261 1.261 15 N -0.535 5.535 16 C 0.110 3.890 17 C -0.130 4.130 18 C -0.122 4.122 19 C -0.182 4.182 20 C -0.095 4.095 21 C -0.001 4.001 22 H 0.130 0.870 23 H 0.108 0.892 24 H 0.103 0.897 25 H 0.082 0.918 26 H 0.280 0.720 27 H 0.107 0.893 28 H 0.103 0.897 29 H 0.103 0.897 30 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.035 4.094 -7.027 8.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 C -0.115 4.115 3 Cl -0.066 7.066 4 C 0.046 3.954 5 N -0.231 5.231 6 C 0.186 3.814 7 C -0.479 4.479 8 H 0.104 0.896 9 C -0.150 4.150 10 N -0.335 5.335 11 Si 0.739 3.261 12 H -0.193 1.193 13 H -0.199 1.199 14 H -0.185 1.185 15 N -0.259 5.259 16 C -0.017 4.017 17 C -0.151 4.151 18 C -0.143 4.143 19 C -0.203 4.203 20 C -0.116 4.116 21 C -0.108 4.108 22 H 0.147 0.853 23 H 0.126 0.874 24 H 0.121 0.879 25 H 0.100 0.900 26 H 0.091 0.909 27 H 0.126 0.874 28 H 0.121 0.879 29 H 0.121 0.879 30 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -0.306 3.683 -6.214 7.230 hybrid contribution -0.370 0.311 -0.888 1.011 sum -0.676 3.993 -7.102 8.176 Atomic orbital electron populations 1.24119 0.93874 1.03773 0.97608 1.23876 0.94326 0.87898 1.05409 1.98348 1.78232 1.33074 1.96940 1.20343 0.99620 0.91661 0.83786 1.45504 1.16952 1.49158 1.11475 1.20469 0.91809 0.86618 0.82534 1.18446 0.99277 1.26344 1.03784 0.89631 1.25845 0.99012 0.95990 0.94138 1.69974 1.35083 1.24995 1.03484 0.86184 0.80570 0.80051 0.79299 1.19312 1.19869 1.18475 1.71390 1.05469 1.29042 1.19969 1.19544 0.94664 0.96136 0.91330 1.19773 0.93345 1.03583 0.98444 1.20215 0.97605 1.00200 0.96242 1.20299 0.99048 1.06367 0.94582 1.19599 0.92854 1.00470 0.98721 1.18825 0.90526 1.05844 0.95594 0.85257 0.87372 0.87852 0.89970 0.90921 0.87446 0.87856 0.87897 0.88582 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.30 14.03 28.97 0.41 -1.89 16 2 C -0.09 -1.44 6.08 -36.07 -0.22 -1.66 16 3 Cl -0.09 -1.51 28.99 -51.86 -1.50 -3.02 16 4 C 0.17 3.02 6.13 -5.20 -0.03 2.99 16 5 N -0.53 -12.18 2.84 -114.77 -0.33 -12.51 16 6 C 0.42 11.01 7.41 -155.67 -1.15 9.85 16 7 C -0.44 -10.73 8.96 -38.06 -0.34 -11.07 16 8 H 0.09 1.83 6.17 -52.49 -0.32 1.51 16 9 C 0.08 1.86 5.49 -17.29 -0.09 1.77 16 10 N -0.71 -18.56 11.88 55.57 0.66 -17.90 16 11 Si 0.92 17.28 29.57 -169.99 -5.03 12.25 16 12 H -0.27 -5.04 7.11 56.52 0.40 -4.63 16 13 H -0.27 -5.14 7.11 56.52 0.40 -4.74 16 14 H -0.26 -4.69 7.11 56.52 0.40 -4.29 16 15 N -0.54 -15.19 9.35 -10.30 -0.10 -15.29 16 16 C 0.11 2.88 7.21 -84.89 -0.61 2.27 16 17 C -0.13 -3.01 10.07 -39.39 -0.40 -3.40 16 18 C -0.12 -2.43 9.96 -39.96 -0.40 -2.83 16 19 C -0.18 -3.54 10.04 -39.39 -0.40 -3.94 16 20 C -0.09 -1.97 10.04 -39.50 -0.40 -2.37 16 21 C 0.00 -0.03 6.88 -83.75 -0.58 -0.60 16 22 H 0.13 1.86 6.98 -52.49 -0.37 1.50 16 23 H 0.11 1.42 8.06 -52.49 -0.42 1.00 16 24 H 0.10 1.67 7.23 -51.93 -0.38 1.29 16 25 H 0.08 1.32 8.14 -51.93 -0.42 0.90 16 26 H 0.28 6.56 8.29 -40.82 -0.34 6.22 16 27 H 0.11 2.37 8.06 -52.49 -0.42 1.94 16 28 H 0.10 1.72 8.06 -52.49 -0.42 1.30 16 29 H 0.10 1.69 8.06 -52.48 -0.42 1.26 16 30 H 0.10 1.80 8.06 -52.49 -0.42 1.37 16 LS Contribution 283.33 15.07 4.27 4.27 Total: -1.00 -29.48 283.33 -8.97 -38.45 By element: Atomic # 1 Polarization: 7.37 SS G_CDS: -2.74 Total: 4.63 kcal Atomic # 6 Polarization: -6.69 SS G_CDS: -4.21 Total: -10.90 kcal Atomic # 7 Polarization: -45.93 SS G_CDS: 0.24 Total: -45.69 kcal Atomic # 14 Polarization: 17.28 SS G_CDS: -5.03 Total: 12.25 kcal Atomic # 17 Polarization: -1.51 SS G_CDS: -1.50 Total: -3.02 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -29.48 -8.97 -38.45 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000110858842.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.820 kcal (2) G-P(sol) polarization free energy of solvation -29.483 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.337 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.449 kcal (6) G-S(sol) free energy of system = (1) + (5) 75.371 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds