Wall clock time and date at job start Mon Mar 30 2020 06:27:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35973 * 116.99835 * 2 1 4 4 C 1.37828 * 120.01758 * 359.97438 * 3 2 1 5 5 C 1.40786 * 119.63923 * 179.97438 * 4 3 2 6 6 C 1.41201 * 120.15657 * 180.02562 * 5 4 3 7 7 H 1.07994 * 120.00264 * 154.62898 * 6 5 4 8 8 C 1.39879 * 120.00018 * 334.63556 * 6 5 4 9 9 N 1.30886 * 119.99855 * 342.92062 * 8 6 5 10 10 Si 1.86797 * 120.00159 * 162.91952 * 8 6 5 11 11 H 1.48508 * 109.47046 * 59.99917 * 10 8 6 12 12 H 1.48494 * 109.47129 * 179.97438 * 10 8 6 13 13 H 1.48495 * 109.47240 * 299.99944 * 10 8 6 14 14 C 1.40844 * 119.69039 * 0.02562 * 5 4 3 15 15 C 1.36467 * 120.02707 * 359.97438 * 14 5 4 16 16 C 1.50701 * 119.81733 * 179.97438 * 15 14 5 17 17 F 1.39894 * 109.47206 * 359.97438 * 16 15 14 18 18 F 1.39908 * 109.46751 * 239.99845 * 16 15 14 19 19 F 1.39896 * 109.47349 * 120.00032 * 16 15 14 20 20 C 1.39150 * 120.36036 * 0.25284 * 15 14 5 21 21 O 1.35742 * 119.84081 * 179.74725 * 20 15 14 22 22 H 1.09005 * 109.47278 * 60.00085 * 1 2 3 23 23 H 1.09002 * 109.47255 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.47443 * 299.99820 * 1 2 3 25 25 H 1.07999 * 120.17590 * 0.02562 * 4 3 2 26 26 H 0.96998 * 120.00597 * 180.02562 * 9 8 6 27 27 H 1.07997 * 119.99122 * 179.97438 * 14 5 4 28 28 H 0.96693 * 114.00301 * 89.99992 * 21 20 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 1.2959 2.3677 -0.0005 5 6 1.9433 3.6179 0.0000 6 6 1.1854 4.8092 0.0000 7 1 1.6083 5.7183 0.4011 8 6 -0.1134 4.8118 -0.5194 9 7 -0.5098 3.8352 -1.2954 10 14 -1.2821 6.2090 -0.1055 11 1 -0.7046 7.4935 -0.5768 12 1 -2.5869 5.9779 -0.7757 13 1 -1.4836 6.2667 1.3646 14 6 3.3506 3.6747 0.0006 15 6 4.0807 2.5217 0.0011 16 6 5.5862 2.5881 0.0011 17 9 5.9940 3.9263 -0.0001 18 9 6.0811 1.9492 -1.1410 19 9 6.0811 1.9503 1.1436 20 6 3.4425 1.2852 -0.0042 21 8 4.1790 0.1450 -0.0088 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3634 0.5138 0.8900 25 1 0.2172 2.3148 -0.0005 26 1 -1.4103 3.8371 -1.6560 27 1 3.8523 4.6311 0.0006 28 1 4.3923 -0.1891 0.8731 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000196177390.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:27:09 Heat of formation + Delta-G solvation = -220.023211 kcal Electronic energy + Delta-G solvation = -20113.055651 eV Core-core repulsion = 16293.336988 eV Total energy + Delta-G solvation = -3819.718663 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 262.060 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -49.46280 -47.01469 -46.89472 -39.23464 -36.93445 -35.90122 -33.60674 -30.24401 -29.21524 -26.84728 -25.39973 -24.54721 -21.18900 -20.84766 -18.49557 -17.85521 -17.75750 -17.34354 -16.45278 -15.86521 -15.26126 -15.02529 -14.90638 -14.29610 -13.83544 -13.69786 -13.40251 -13.28951 -13.17209 -13.11842 -13.04776 -12.34251 -11.98993 -11.64497 -11.54783 -11.18956 -11.09236 -10.80112 -10.61274 -10.18117 -10.05767 -9.62876 -9.32693 -7.84146 -7.27582 -7.01347 -4.68206 2.17419 2.52171 2.92080 2.93246 2.98044 3.39540 3.71845 4.04916 4.19869 4.63560 4.89100 5.02406 5.19531 5.40708 5.71467 5.81412 6.03717 6.34573 6.51285 6.61347 6.72550 6.89344 7.02296 7.32478 7.58033 7.69077 8.01575 8.24618 8.42208 8.52116 8.76215 9.87401 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.020853 B = 0.007953 C = 0.006075 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1342.400852 B = 3519.900857 C = 4608.199757 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.321 6.321 3 C 0.122 3.878 4 C -0.225 4.225 5 C 0.129 3.871 6 C -0.447 4.447 7 H 0.087 0.913 8 C 0.075 3.925 9 N -0.784 5.784 10 Si 0.915 3.085 11 H -0.262 1.262 12 H -0.276 1.276 13 H -0.261 1.261 14 C -0.190 4.190 15 C -0.139 4.139 16 C 0.514 3.486 17 F -0.185 7.185 18 F -0.179 7.179 19 F -0.188 7.188 20 C -0.021 4.021 21 O -0.484 6.484 22 H 0.058 0.942 23 H 0.084 0.916 24 H 0.047 0.953 25 H 0.139 0.861 26 H 0.286 0.714 27 H 0.116 0.884 28 H 0.358 0.642 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.033 -1.803 3.079 3.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.235 6.235 3 C 0.077 3.923 4 C -0.245 4.245 5 C 0.126 3.874 6 C -0.475 4.475 7 H 0.105 0.895 8 C -0.145 4.145 9 N -0.408 5.408 10 Si 0.739 3.261 11 H -0.186 1.186 12 H -0.201 1.201 13 H -0.185 1.185 14 C -0.209 4.209 15 C -0.141 4.141 16 C 0.460 3.540 17 F -0.167 7.167 18 F -0.161 7.161 19 F -0.170 7.170 20 C -0.067 4.067 21 O -0.290 6.290 22 H 0.076 0.924 23 H 0.103 0.897 24 H 0.065 0.935 25 H 0.156 0.844 26 H 0.097 0.903 27 H 0.134 0.866 28 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges 0.913 -2.006 2.292 3.180 hybrid contribution -0.549 0.706 0.553 1.051 sum 0.364 -1.300 2.845 3.149 Atomic orbital electron populations 1.22873 0.79657 1.01990 1.01666 1.85974 1.20322 1.27740 1.89472 1.19066 0.90632 0.84433 0.98139 1.21504 1.00402 0.90540 1.12052 1.17294 0.89937 0.92992 0.87207 1.19585 0.97466 0.96369 1.34113 0.89525 1.26003 0.98756 0.97416 0.92305 1.69811 1.19255 1.30931 1.20813 0.86230 0.78692 0.81086 0.80091 1.18636 1.20097 1.18528 1.20562 0.94421 0.95339 1.10627 1.19337 0.88738 0.95401 1.10661 1.18408 0.89723 0.72622 0.73285 1.93104 1.92128 1.35149 1.96281 1.93173 1.89586 1.82067 1.51230 1.93117 1.89789 1.82338 1.51733 1.16639 0.86159 0.83982 1.19923 1.84906 1.72574 1.39949 1.31581 0.92383 0.89721 0.93457 0.84376 0.90287 0.86595 0.79049 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.58 9.81 101.05 0.99 1.57 15 2 O -0.32 -6.89 10.28 -34.19 -0.35 -7.24 15 3 C 0.12 2.88 6.70 -39.14 -0.26 2.62 15 4 C -0.22 -5.46 7.66 -38.77 -0.30 -5.76 15 5 C 0.13 3.20 5.57 -106.82 -0.59 2.61 15 6 C -0.45 -10.85 9.04 -37.84 -0.34 -11.19 15 7 H 0.09 1.99 7.90 -52.49 -0.41 1.57 15 8 C 0.07 1.71 5.14 -17.34 -0.09 1.62 15 9 N -0.78 -18.44 10.96 55.54 0.61 -17.83 15 10 Si 0.92 16.99 29.59 -169.99 -5.03 11.96 15 11 H -0.26 -4.84 7.11 56.52 0.40 -4.44 15 12 H -0.28 -5.00 7.11 56.52 0.40 -4.60 15 13 H -0.26 -4.81 7.11 56.52 0.40 -4.41 15 14 C -0.19 -4.46 9.12 -39.24 -0.36 -4.82 15 15 C -0.14 -3.17 5.34 -104.92 -0.56 -3.73 15 16 C 0.51 10.49 2.98 36.01 0.11 10.60 15 17 F -0.19 -3.62 15.93 2.25 0.04 -3.58 15 18 F -0.18 -3.73 16.92 2.25 0.04 -3.70 15 19 F -0.19 -3.58 16.95 2.25 0.04 -3.54 15 20 C -0.02 -0.48 6.62 -38.65 -0.26 -0.74 15 21 O -0.48 -10.28 12.13 -33.47 -0.41 -10.68 15 22 H 0.06 1.04 7.66 -51.93 -0.40 0.64 15 23 H 0.08 1.15 8.14 -51.93 -0.42 0.72 15 24 H 0.05 0.78 7.66 -51.93 -0.40 0.38 15 25 H 0.14 3.31 4.42 -52.49 -0.23 3.08 15 26 H 0.29 6.08 8.30 -40.82 -0.34 5.74 15 27 H 0.12 2.56 7.10 -52.49 -0.37 2.19 15 28 H 0.36 6.10 9.06 45.56 0.41 6.51 15 LS Contribution 262.31 15.07 3.95 3.95 Total: -1.00 -26.74 262.31 -3.73 -30.47 By element: Atomic # 1 Polarization: 8.36 SS G_CDS: -0.96 Total: 7.40 kcal Atomic # 6 Polarization: -5.56 SS G_CDS: -1.66 Total: -7.22 kcal Atomic # 7 Polarization: -18.44 SS G_CDS: 0.61 Total: -17.83 kcal Atomic # 8 Polarization: -17.16 SS G_CDS: -0.76 Total: -17.92 kcal Atomic # 9 Polarization: -10.93 SS G_CDS: 0.11 Total: -10.82 kcal Atomic # 14 Polarization: 16.99 SS G_CDS: -5.03 Total: 11.96 kcal Total LS contribution 3.95 Total: 3.95 kcal Total: -26.74 -3.73 -30.47 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000196177390.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -189.550 kcal (2) G-P(sol) polarization free energy of solvation -26.740 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -216.290 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.733 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.473 kcal (6) G-S(sol) free energy of system = (1) + (5) -220.023 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds