Wall clock time and date at job start Mon Mar 30 2020 06:24:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35758 * 117.00529 * 2 1 4 4 C 1.35976 * 119.68080 * 0.02562 * 3 2 1 5 5 C 1.40738 * 120.10080 * 180.02562 * 4 3 2 6 6 C 1.40349 * 121.25985 * 180.24393 * 5 4 3 7 7 C 1.36274 * 119.62522 * 180.23853 * 6 5 4 8 8 C 1.39282 * 121.66881 * 359.45778 * 7 6 5 9 9 Cl 1.73598 * 119.22343 * 180.27839 * 8 7 6 10 10 C 1.36178 * 121.54587 * 0.30072 * 8 7 6 11 11 C 1.40900 * 119.47644 * 359.97362 * 10 8 7 12 12 C 1.39762 * 121.36427 * 180.02562 * 11 10 8 13 13 C 1.40016 * 119.35767 * 179.97438 * 12 11 10 14 14 C 1.41013 * 119.89529 * 179.97438 * 13 12 11 15 15 H 1.08000 * 120.00230 * 154.56715 * 14 13 12 16 16 C 1.40018 * 119.99465 * 334.57265 * 14 13 12 17 17 N 1.30805 * 120.00256 * 342.17817 * 16 14 13 18 18 Si 1.86802 * 119.99651 * 162.18031 * 16 14 13 19 19 H 1.48502 * 109.47184 * 94.63541 * 18 16 14 20 20 H 1.48498 * 109.46794 * 214.63198 * 18 16 14 21 21 H 1.48498 * 109.47267 * 334.63452 * 18 16 14 22 22 H 1.09006 * 109.46895 * 300.00311 * 1 2 3 23 23 H 1.08995 * 109.47226 * 60.00029 * 1 2 3 24 24 H 1.08996 * 109.47464 * 180.02562 * 1 2 3 25 25 H 1.08001 * 119.95175 * 359.97438 * 4 3 2 26 26 H 1.07999 * 120.19051 * 359.97438 * 6 5 4 27 27 H 1.08004 * 119.16530 * 179.73584 * 7 6 5 28 28 H 1.08002 * 120.26228 * 180.02562 * 10 8 7 29 29 H 1.07993 * 120.31835 * 359.95750 * 12 11 10 30 30 H 0.97003 * 120.00243 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0454 1.2096 0.0000 4 6 1.2986 2.3459 0.0005 5 6 1.9284 3.6045 0.0000 6 6 1.1815 4.7927 0.0056 7 6 1.8258 5.9934 0.0000 8 6 3.2161 6.0773 -0.0001 9 17 3.9709 7.6405 -0.0001 10 6 3.9971 4.9617 -0.0006 11 6 3.3899 3.6902 -0.0005 12 6 4.1534 2.5195 -0.0005 13 6 3.5061 1.2780 0.0001 14 6 4.2652 0.0896 -0.0004 15 1 3.8445 -0.8202 0.4017 16 6 5.5646 0.0893 -0.5222 17 7 5.9532 1.0581 -1.3104 18 14 6.7431 -1.2949 -0.0926 19 1 6.6904 -2.3361 -1.1502 20 1 8.1239 -0.7572 0.0042 21 1 6.3519 -1.8920 1.2096 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3634 -1.0276 0.0005 25 1 0.2204 2.2825 0.0005 26 1 0.1021 4.7556 0.0101 27 1 1.2437 6.9031 0.0000 28 1 5.0735 5.0508 -0.0003 29 1 5.2320 2.5721 -0.0013 30 1 6.8532 1.0577 -1.6721 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000216818251.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:24:47 Heat of formation + Delta-G solvation = -17.275057 kcal Electronic energy + Delta-G solvation = -16694.162584 eV Core-core repulsion = 13865.801645 eV Total energy + Delta-G solvation = -2828.360939 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.050 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -39.17810 -37.80949 -35.96746 -34.96575 -32.99670 -31.36667 -29.52317 -27.80604 -26.70197 -25.47525 -21.92505 -21.51401 -20.59439 -17.89401 -17.32167 -16.34832 -15.59572 -15.06503 -14.93021 -14.25768 -14.16083 -13.71096 -13.01329 -12.80049 -12.63055 -12.46197 -11.90375 -11.51173 -11.40649 -11.30759 -11.11657 -10.88230 -10.71659 -10.65052 -10.33614 -10.02183 -9.65306 -9.56429 -9.05303 -8.82178 -7.27943 -7.02084 -6.75682 -4.45529 1.59354 2.00803 2.85679 2.89004 2.97347 3.03056 3.28099 3.74840 3.81071 4.10023 4.62419 5.37691 5.45212 5.54923 5.61379 5.75922 5.77488 5.91904 6.15303 6.20894 6.33235 6.58874 6.63179 6.84184 6.97955 7.11899 7.21690 7.24327 7.48053 7.57733 7.84159 7.93742 8.13782 8.40248 8.54879 8.70568 9.90761 Molecular weight = 262.05amu Principal moments of inertia in cm(-1) A = 0.017861 B = 0.006993 C = 0.005105 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1567.293703 B = 4002.859454 C = 5483.670000 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.310 6.310 3 C 0.088 3.912 4 C -0.207 4.207 5 C -0.110 4.110 6 C -0.075 4.075 7 C -0.186 4.186 8 C -0.025 4.025 9 Cl -0.113 7.113 10 C -0.129 4.129 11 C -0.002 4.002 12 C -0.204 4.204 13 C 0.108 3.892 14 C -0.420 4.420 15 H 0.089 0.911 16 C 0.069 3.931 17 N -0.768 5.768 18 Si 0.915 3.085 19 H -0.268 1.268 20 H -0.272 1.272 21 H -0.257 1.257 22 H 0.046 0.954 23 H 0.046 0.954 24 H 0.088 0.912 25 H 0.109 0.891 26 H 0.111 0.889 27 H 0.108 0.892 28 H 0.119 0.881 29 H 0.132 0.868 30 H 0.287 0.713 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.513 1.622 1.580 5.049 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.223 6.223 3 C 0.043 3.957 4 C -0.226 4.226 5 C -0.111 4.111 6 C -0.094 4.094 7 C -0.205 4.205 8 C -0.051 4.051 9 Cl -0.085 7.085 10 C -0.148 4.148 11 C -0.003 4.003 12 C -0.224 4.224 13 C 0.105 3.895 14 C -0.447 4.447 15 H 0.107 0.893 16 C -0.152 4.152 17 N -0.390 5.390 18 Si 0.738 3.262 19 H -0.193 1.193 20 H -0.197 1.197 21 H -0.181 1.181 22 H 0.064 0.936 23 H 0.065 0.935 24 H 0.106 0.894 25 H 0.127 0.873 26 H 0.129 0.871 27 H 0.126 0.874 28 H 0.137 0.863 29 H 0.150 0.850 30 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -4.152 1.619 1.421 4.678 hybrid contribution 0.269 -0.165 -0.009 0.316 sum -3.883 1.454 1.412 4.380 Atomic orbital electron populations 1.22872 0.80729 1.02465 1.00539 1.86017 1.19171 1.28294 1.88838 1.20370 0.92704 0.82789 0.99811 1.20411 0.97796 0.91867 1.12562 1.18385 0.92150 0.92146 1.08376 1.20557 0.97999 0.91500 0.99308 1.19994 0.91871 0.97664 1.10975 1.20255 0.92805 0.84240 1.07801 1.98288 1.82826 1.29979 1.97409 1.20718 0.98849 0.90640 1.04592 1.18773 0.91491 0.92723 0.97285 1.20894 0.98978 0.88682 1.13842 1.17995 0.85704 0.94399 0.91436 1.19671 0.96898 0.96636 1.31483 0.89273 1.26041 0.98905 0.97466 0.92786 1.69817 1.19361 1.30287 1.19585 0.86174 0.78988 0.80625 0.80414 1.19267 1.19721 1.18068 0.93586 0.93523 0.89398 0.87305 0.87105 0.87372 0.86256 0.85050 0.90178 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.45 9.80 101.05 0.99 1.44 16 2 O -0.31 -6.50 9.85 -18.98 -0.19 -6.69 16 3 C 0.09 2.04 6.82 -37.18 -0.25 1.78 16 4 C -0.21 -4.39 8.72 -39.45 -0.34 -4.74 16 5 C -0.11 -2.42 5.88 -104.87 -0.62 -3.04 16 6 C -0.08 -1.45 9.77 -39.49 -0.39 -1.83 16 7 C -0.19 -3.49 9.66 -39.90 -0.39 -3.88 16 8 C -0.02 -0.49 6.26 -39.93 -0.25 -0.74 16 9 Cl -0.11 -1.94 28.89 -51.86 -1.50 -3.44 16 10 C -0.13 -2.77 9.53 -39.32 -0.37 -3.14 16 11 C 0.00 -0.05 5.87 -105.03 -0.62 -0.66 16 12 C -0.20 -5.11 8.44 -38.35 -0.32 -5.43 16 13 C 0.11 2.74 5.71 -104.97 -0.60 2.14 16 14 C -0.42 -10.49 8.73 -37.86 -0.33 -10.82 16 15 H 0.09 2.17 7.69 -52.49 -0.40 1.77 16 16 C 0.07 1.62 5.12 -17.32 -0.09 1.53 16 17 N -0.77 -18.63 10.99 55.55 0.61 -18.02 16 18 Si 0.91 17.50 29.60 -169.99 -5.03 12.46 16 19 H -0.27 -5.06 7.11 56.52 0.40 -4.66 16 20 H -0.27 -5.10 7.11 56.52 0.40 -4.70 16 21 H -0.26 -4.89 7.11 56.52 0.40 -4.49 16 22 H 0.05 0.63 7.63 -51.93 -0.40 0.24 16 23 H 0.05 0.66 7.63 -51.93 -0.40 0.26 16 24 H 0.09 1.06 8.14 -51.93 -0.42 0.64 16 25 H 0.11 1.96 6.16 -52.49 -0.32 1.64 16 26 H 0.11 1.79 8.06 -52.49 -0.42 1.37 16 27 H 0.11 1.77 8.06 -52.48 -0.42 1.35 16 28 H 0.12 2.45 8.06 -52.49 -0.42 2.02 16 29 H 0.13 3.38 6.19 -52.49 -0.32 3.05 16 30 H 0.29 6.28 8.30 -40.82 -0.34 5.95 16 LS Contribution 276.85 15.07 4.17 4.17 Total: -1.00 -26.27 276.85 -8.18 -34.45 By element: Atomic # 1 Polarization: 7.12 SS G_CDS: -2.67 Total: 4.45 kcal Atomic # 6 Polarization: -23.81 SS G_CDS: -3.58 Total: -27.39 kcal Atomic # 7 Polarization: -18.63 SS G_CDS: 0.61 Total: -18.02 kcal Atomic # 8 Polarization: -6.50 SS G_CDS: -0.19 Total: -6.69 kcal Atomic # 14 Polarization: 17.50 SS G_CDS: -5.03 Total: 12.46 kcal Atomic # 17 Polarization: -1.94 SS G_CDS: -1.50 Total: -3.44 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -26.27 -8.18 -34.45 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000216818251.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.176 kcal (2) G-P(sol) polarization free energy of solvation -26.270 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.181 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.275 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds