Wall clock time and date at job start Mon Mar 30 2020 06:36:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30501 * 125.72241 * 2 1 4 4 C 1.34161 * 109.36139 * 180.02562 * 3 2 1 5 5 C 1.34634 * 108.21478 * 359.73069 * 4 3 2 6 6 N 1.35932 * 125.72333 * 180.02562 * 2 1 3 7 7 C 1.39698 * 126.48678 * 359.97256 * 6 2 1 8 8 C 1.39369 * 119.83624 * 245.00687 * 7 6 2 9 9 C 1.36411 * 120.19003 * 179.97438 * 8 7 6 10 10 C 1.40862 * 119.84091 * 0.02562 * 9 8 7 11 11 C 1.41190 * 120.16547 * 180.02562 * 10 9 8 12 12 H 1.07994 * 119.99836 * 24.54730 * 11 10 9 13 13 C 1.39925 * 120.00001 * 204.54458 * 11 10 9 14 14 N 1.30849 * 120.00082 * 17.94242 * 13 11 10 15 15 Si 1.86805 * 119.99781 * 197.94515 * 13 11 10 16 16 H 1.48494 * 109.47092 * 359.97438 * 15 13 11 17 17 H 1.48501 * 109.46999 * 120.00158 * 15 13 11 18 18 H 1.48498 * 109.46772 * 239.99539 * 15 13 11 19 19 C 1.40810 * 119.66822 * 359.97438 * 10 9 8 20 20 C 1.36525 * 119.81105 * 0.02562 * 19 10 9 21 21 Cl 1.73598 * 119.92634 * 179.72629 * 20 19 10 22 22 H 1.09002 * 109.47302 * 269.97346 * 1 2 3 23 23 H 1.09003 * 109.47047 * 29.97610 * 1 2 3 24 24 H 1.08999 * 109.47087 * 149.97243 * 1 2 3 25 25 H 1.07999 * 125.88647 * 180.02562 * 4 3 2 26 26 H 1.08007 * 126.58182 * 180.26566 * 5 4 3 27 27 H 1.08002 * 119.90310 * 0.02562 * 8 7 6 28 28 H 1.07997 * 120.07658 * 179.97438 * 9 8 7 29 29 H 0.96998 * 120.00181 * 180.02562 * 14 13 11 30 30 H 1.08002 * 120.09433 * 180.02562 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2690 1.0595 0.0000 4 6 3.5562 0.6816 -0.0006 5 6 3.5998 -0.6641 0.0051 6 7 2.3007 -1.1036 -0.0005 7 6 1.8739 -2.4337 -0.0006 8 6 2.1488 -3.2502 1.0950 9 6 1.7350 -4.5500 1.1028 10 6 1.0283 -5.0673 -0.0005 11 6 0.5963 -6.4114 0.0005 12 1 0.4382 -6.9270 0.9362 13 6 0.3729 -7.0755 -1.2107 14 7 0.8824 -6.6030 -2.3195 15 14 -0.6527 -8.6364 -1.2448 16 1 -1.1096 -8.9586 0.1309 17 1 -1.8321 -8.4347 -2.1242 18 1 0.1690 -9.7572 -1.7682 19 6 0.7540 -4.2367 -1.1040 20 6 1.1747 -2.9379 -1.0972 21 17 0.8443 -1.9133 -2.4590 22 1 -0.3634 -0.0005 1.0277 23 1 -0.3633 0.8902 -0.5135 24 1 -0.3633 -0.8897 -0.5143 25 1 4.4101 1.3428 -0.0003 26 1 4.4875 -1.2793 0.0102 27 1 2.6904 -2.8524 1.9405 28 1 1.9494 -5.1812 1.9525 29 1 0.7272 -7.0631 -3.1592 30 1 0.2123 -4.6260 -1.9534 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000216818752.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:36:55 Heat of formation + Delta-G solvation = 63.397016 kcal Electronic energy + Delta-G solvation = -16906.196008 eV Core-core repulsion = 14113.626024 eV Total energy + Delta-G solvation = -2792.569984 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.49997 -38.04480 -35.67237 -34.44325 -32.61128 -31.18213 -29.71840 -29.19173 -26.44439 -25.32509 -22.04051 -21.51534 -20.43324 -19.19411 -17.84305 -17.10487 -15.80300 -15.06915 -14.60058 -14.03576 -13.82285 -13.62562 -13.13524 -12.86384 -12.65211 -12.55632 -12.14037 -11.97470 -11.86058 -11.44422 -11.35020 -11.13826 -10.58235 -10.49346 -10.16140 -9.97779 -9.64547 -9.42314 -9.12753 -7.91727 -7.84113 -7.65585 -7.20165 -4.81909 2.06501 2.51599 2.70630 2.86163 2.89249 2.92587 3.00312 3.61786 3.65585 3.67496 4.11368 5.05082 5.13092 5.50193 5.76264 5.83460 5.86947 5.97278 6.26326 6.32542 6.33669 6.51049 6.56204 6.75782 6.89290 6.96087 7.06380 7.33179 7.42361 7.51266 7.69834 8.02777 8.14098 8.38115 8.42435 8.68266 9.71473 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.034882 B = 0.006032 C = 0.005615 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 802.518644 B = 4640.652405 C = 4985.061781 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 C 0.213 3.787 3 N -0.505 5.505 4 C -0.047 4.047 5 C -0.052 4.052 6 N -0.369 5.369 7 C -0.057 4.057 8 C -0.053 4.053 9 C -0.219 4.219 10 C 0.123 3.877 11 C -0.435 4.435 12 H 0.090 0.910 13 C 0.072 3.928 14 N -0.768 5.768 15 Si 0.916 3.084 16 H -0.256 1.256 17 H -0.267 1.267 18 H -0.270 1.270 19 C -0.156 4.156 20 C 0.017 3.983 21 Cl -0.103 7.103 22 H 0.071 0.929 23 H 0.079 0.921 24 H 0.079 0.921 25 H 0.161 0.839 26 H 0.164 0.836 27 H 0.103 0.897 28 H 0.108 0.892 29 H 0.290 0.710 30 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.562 2.161 1.558 2.723 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.049 4.049 3 N -0.225 5.225 4 C -0.195 4.195 5 C -0.186 4.186 6 N -0.045 5.045 7 C -0.149 4.149 8 C -0.072 4.072 9 C -0.239 4.239 10 C 0.120 3.880 11 C -0.462 4.462 12 H 0.108 0.892 13 C -0.150 4.150 14 N -0.391 5.391 15 Si 0.739 3.261 16 H -0.179 1.179 17 H -0.192 1.192 18 H -0.195 1.195 19 C -0.176 4.176 20 C -0.011 4.011 21 Cl -0.074 7.074 22 H 0.090 0.910 23 H 0.098 0.902 24 H 0.097 0.903 25 H 0.179 0.821 26 H 0.182 0.818 27 H 0.121 0.879 28 H 0.126 0.874 29 H 0.101 0.899 30 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -0.882 2.861 1.165 3.213 hybrid contribution 0.200 -1.481 -0.315 1.527 sum -0.683 1.380 0.850 1.759 Atomic orbital electron populations 1.20181 0.85788 1.03795 1.02736 1.23374 0.95365 0.81262 1.04892 1.70139 1.02155 1.28450 1.21791 1.22036 0.94663 0.92580 1.10193 1.22723 0.87675 0.96280 1.11949 1.42438 1.05504 1.05161 1.51372 1.16712 1.16927 0.83204 0.98078 1.20171 0.98613 0.93774 0.94679 1.20693 1.06724 0.94937 1.01518 1.17614 0.87465 0.93010 0.89935 1.19790 1.36566 0.95910 0.93895 0.89167 1.26115 0.93879 1.00165 0.94871 1.69801 1.31105 1.37852 1.00314 0.86109 0.79881 0.79943 0.80152 1.17942 1.19202 1.19527 1.20952 1.05018 0.89510 1.02137 1.20440 1.01856 0.91934 0.86835 1.98294 1.94377 1.69083 1.45645 0.91018 0.90187 0.90262 0.82147 0.81835 0.87857 0.87396 0.89887 0.84584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.13 9.87 36.01 0.36 -0.77 16 2 C 0.21 4.20 7.02 -154.60 -1.09 3.12 16 3 N -0.51 -10.14 11.24 -10.61 -0.12 -10.26 16 4 C -0.05 -0.84 11.85 -17.81 -0.21 -1.05 16 5 C -0.05 -0.97 11.47 -16.45 -0.19 -1.16 16 6 N -0.37 -7.47 2.42 -57.63 -0.14 -7.61 16 7 C -0.06 -1.22 5.45 -83.39 -0.45 -1.68 16 8 C -0.05 -1.09 9.84 -39.82 -0.39 -1.48 16 9 C -0.22 -4.69 9.74 -39.25 -0.38 -5.07 16 10 C 0.12 2.89 5.57 -106.81 -0.60 2.29 16 11 C -0.43 -9.96 9.04 -37.83 -0.34 -10.31 16 12 H 0.09 1.95 7.91 -52.49 -0.42 1.54 16 13 C 0.07 1.57 5.13 -17.34 -0.09 1.48 16 14 N -0.77 -17.61 10.96 55.55 0.61 -17.01 16 15 Si 0.92 16.30 29.60 -169.99 -5.03 11.27 16 16 H -0.26 -4.50 7.11 56.52 0.40 -4.10 16 17 H -0.27 -4.73 7.11 56.52 0.40 -4.33 16 18 H -0.27 -4.77 7.11 56.52 0.40 -4.37 16 19 C -0.16 -3.65 8.41 -39.23 -0.33 -3.98 16 20 C 0.02 0.38 5.58 -39.73 -0.22 0.16 16 21 Cl -0.10 -2.09 25.85 -51.86 -1.34 -3.43 16 22 H 0.07 1.09 8.14 -51.93 -0.42 0.67 16 23 H 0.08 1.21 8.14 -51.93 -0.42 0.79 16 24 H 0.08 1.40 5.60 -51.93 -0.29 1.11 16 25 H 0.16 2.35 8.06 -52.49 -0.42 1.93 16 26 H 0.16 2.64 8.06 -52.48 -0.42 2.22 16 27 H 0.10 1.93 8.06 -52.49 -0.42 1.51 16 28 H 0.11 2.11 8.06 -52.49 -0.42 1.69 16 29 H 0.29 6.00 8.30 -40.82 -0.34 5.66 16 30 H 0.14 3.31 6.16 -52.49 -0.32 2.98 16 LS Contribution 276.84 15.07 4.17 4.17 Total: -1.00 -25.53 276.84 -8.49 -34.01 By element: Atomic # 1 Polarization: 10.00 SS G_CDS: -2.70 Total: 7.30 kcal Atomic # 6 Polarization: -14.51 SS G_CDS: -3.94 Total: -18.44 kcal Atomic # 7 Polarization: -35.23 SS G_CDS: 0.35 Total: -34.88 kcal Atomic # 14 Polarization: 16.30 SS G_CDS: -5.03 Total: 11.27 kcal Atomic # 17 Polarization: -2.09 SS G_CDS: -1.34 Total: -3.43 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -25.53 -8.49 -34.01 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000216818752.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.409 kcal (2) G-P(sol) polarization free energy of solvation -25.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.883 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.486 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.012 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.397 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds