Wall clock time and date at job start Mon Mar 30 2020 06:39:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.35399 * 126.15535 * 2 1 4 4 C 1.39336 * 106.63517 * 180.11648 * 3 2 1 5 5 C 1.41223 * 126.29348 * 179.83825 * 4 3 2 6 6 H 1.07995 * 120.00279 * 5.50721 * 5 4 3 7 7 C 1.39659 * 119.99799 * 185.50061 * 5 4 3 8 8 N 1.31042 * 119.99691 * 5.96055 * 7 5 4 9 9 Si 1.86799 * 119.99783 * 185.68217 * 7 5 4 10 10 H 1.48497 * 109.47217 * 265.28606 * 9 7 5 11 11 H 1.48497 * 109.47282 * 25.29041 * 9 7 5 12 12 H 1.48504 * 109.46939 * 145.29118 * 9 7 5 13 13 N 1.35097 * 107.40860 * 359.57471 * 4 3 2 14 14 C 1.31186 * 109.05003 * 0.26958 * 13 4 3 15 15 C 1.47819 * 125.38728 * 180.02562 * 14 13 4 16 16 C 1.39633 * 120.13953 * 150.82580 * 15 14 13 17 17 C 1.37935 * 119.87547 * 179.97438 * 16 15 14 18 18 C 1.38364 * 120.16070 * 359.97438 * 17 16 15 19 19 C 1.38465 * 120.28838 * 359.97438 * 18 17 16 20 20 Cl 1.73598 * 119.94334 * 180.02562 * 19 18 17 21 21 C 1.38094 * 120.11740 * 359.76767 * 19 18 17 22 22 H 1.08998 * 109.47010 * 264.77627 * 1 2 3 23 23 H 1.09002 * 109.47358 * 24.77830 * 1 2 3 24 24 H 1.09000 * 109.46841 * 144.77460 * 1 2 3 25 25 H 1.07999 * 126.68571 * 359.95505 * 3 2 1 26 26 H 0.96999 * 119.99637 * 179.71772 * 8 7 5 27 27 H 1.07997 * 120.06233 * 0.02562 * 16 15 14 28 28 H 1.07996 * 119.91329 * 179.97438 * 17 16 15 29 29 H 1.08007 * 119.85575 * 180.02562 * 18 17 16 30 30 H 1.08001 * 120.08130 * 180.27519 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2638 1.0932 0.0000 4 6 3.5771 0.6277 -0.0027 5 6 4.7453 1.4212 -0.0069 6 1 4.6691 2.4948 0.0815 7 6 5.9991 0.8174 -0.1252 8 7 6.0874 -0.4707 -0.3493 9 14 7.5498 1.8474 0.0284 10 1 8.0069 2.2585 -1.3234 11 1 7.2630 3.0557 0.8426 12 1 8.6125 1.0468 0.6879 13 7 3.5273 -0.7224 0.0053 14 6 2.2724 -1.1046 0.0069 15 6 1.8046 -2.5068 0.0155 16 6 0.5822 -2.8345 0.6054 17 6 0.1507 -4.1446 0.6099 18 6 0.9259 -5.1338 0.0311 19 6 2.1387 -4.8162 -0.5566 20 17 3.1039 -6.0643 -1.2808 21 6 2.5795 -3.5076 -0.5725 22 1 -0.3633 -0.0936 1.0234 23 1 -0.3634 0.9331 -0.4307 24 1 -0.3633 -0.8395 -0.5928 25 1 1.9452 2.1252 -0.0007 26 1 6.9582 -0.8893 -0.4356 27 1 -0.0248 -2.0634 1.0565 28 1 -0.7945 -4.3988 1.0663 29 1 0.5831 -6.1580 0.0371 30 1 3.5235 -3.2599 -1.0350 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000222758311.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:23 Heat of formation + Delta-G solvation = 75.758030 kcal Electronic energy + Delta-G solvation = -16600.536476 eV Core-core repulsion = 13808.502505 eV Total energy + Delta-G solvation = -2792.033970 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.35118 -38.58272 -36.19646 -33.76859 -32.22213 -31.40004 -30.38911 -27.97353 -26.51638 -24.64347 -22.39589 -22.29793 -19.65520 -19.18018 -17.01820 -16.52887 -15.58965 -15.02577 -14.74585 -14.64055 -14.48267 -13.51946 -13.25941 -13.17673 -12.67108 -12.38099 -12.23232 -12.04994 -11.34830 -11.26311 -11.09895 -10.97366 -10.90560 -10.65334 -10.27572 -9.94340 -9.20368 -8.87980 -8.54029 -8.17254 -8.00141 -6.86002 -6.22753 -4.02087 1.27844 1.50589 2.34829 3.12522 3.27210 3.30632 3.35036 3.87278 4.05576 4.23747 4.65048 4.98327 5.01505 5.24637 5.31215 5.43277 5.57402 5.67728 5.75519 5.77420 5.89904 6.12156 6.30483 6.47632 6.52095 6.73635 7.03496 7.17576 7.46687 7.64147 7.80716 8.36319 8.64584 9.06867 9.26677 9.90998 10.72491 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.019423 B = 0.006355 C = 0.004890 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1441.234438 B = 4404.953451 C = 5724.051009 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.081 3.919 2 N -0.455 5.455 3 C -0.199 4.199 4 C 0.198 3.802 5 C -0.457 4.457 6 H 0.076 0.924 7 C 0.077 3.923 8 N -0.773 5.773 9 Si 0.901 3.099 10 H -0.275 1.275 11 H -0.266 1.266 12 H -0.280 1.280 13 N -0.430 5.430 14 C 0.168 3.832 15 C 0.042 3.958 16 C -0.129 4.129 17 C -0.108 4.108 18 C -0.128 4.128 19 C -0.030 4.030 20 Cl -0.079 7.079 21 C -0.078 4.078 22 H 0.058 0.942 23 H 0.072 0.928 24 H 0.071 0.929 25 H 0.148 0.852 26 H 0.267 0.733 27 H 0.126 0.874 28 H 0.128 0.872 29 H 0.127 0.873 30 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.720 -6.891 0.309 12.748 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.145 5.145 3 C -0.328 4.328 4 C 0.071 3.929 5 C -0.492 4.492 6 H 0.094 0.906 7 C -0.141 4.141 8 N -0.399 5.399 9 Si 0.726 3.274 10 H -0.201 1.201 11 H -0.190 1.190 12 H -0.206 1.206 13 N -0.154 5.154 14 C -0.085 4.085 15 C 0.039 3.961 16 C -0.149 4.149 17 C -0.126 4.126 18 C -0.147 4.147 19 C -0.057 4.057 20 Cl -0.050 7.050 21 C -0.098 4.098 22 H 0.077 0.923 23 H 0.091 0.909 24 H 0.090 0.910 25 H 0.165 0.835 26 H 0.078 0.922 27 H 0.144 0.856 28 H 0.146 0.854 29 H 0.145 0.855 30 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -9.950 -7.671 0.207 12.565 hybrid contribution 0.058 1.005 0.045 1.007 sum -9.893 -6.666 0.252 11.932 Atomic orbital electron populations 1.21820 0.80095 1.02983 1.01428 1.44471 1.04912 1.06751 1.58358 1.22526 0.91373 0.90108 1.28836 1.18379 0.90732 0.87823 0.95932 1.18421 0.88683 0.93391 1.48727 0.90590 1.25725 1.00013 0.94870 0.93521 1.70068 1.24839 1.09984 1.35023 0.86449 0.81686 0.80533 0.78716 1.20086 1.19024 1.20590 1.71238 1.12451 1.12993 1.18712 1.21305 0.87339 0.86411 1.13462 1.17657 0.93069 0.89473 0.95852 1.21419 0.96342 0.96794 1.00320 1.20852 0.99673 0.92210 0.99858 1.20956 0.93614 1.00008 1.00138 1.20781 0.93878 0.89616 1.01402 1.98348 1.71516 1.52942 1.82168 1.21234 1.00785 0.89530 0.98233 0.92317 0.90912 0.91013 0.83484 0.92234 0.85641 0.85407 0.85483 0.83466 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.19 9.35 59.85 0.56 1.75 16 2 N -0.46 -9.70 3.15 -120.76 -0.38 -10.08 16 3 C -0.20 -4.80 11.58 -15.57 -0.18 -4.98 16 4 C 0.20 5.56 6.64 -84.89 -0.56 5.00 16 5 C -0.46 -12.92 9.37 -37.92 -0.36 -13.27 16 6 H 0.08 2.02 7.85 -52.49 -0.41 1.61 16 7 C 0.08 2.12 5.48 -17.36 -0.10 2.02 16 8 N -0.77 -22.16 11.99 55.53 0.67 -21.49 16 9 Si 0.90 20.17 29.56 -169.99 -5.03 15.14 16 10 H -0.28 -6.05 7.11 56.52 0.40 -5.65 16 11 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 12 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 13 N -0.43 -12.04 9.45 -8.80 -0.08 -12.12 16 14 C 0.17 3.96 7.44 -154.55 -1.15 2.81 16 15 C 0.04 0.82 5.76 -104.96 -0.61 0.21 16 16 C -0.13 -1.98 8.45 -39.17 -0.33 -2.31 16 17 C -0.11 -1.37 10.03 -39.65 -0.40 -1.77 16 18 C -0.13 -1.71 9.82 -39.45 -0.39 -2.10 16 19 C -0.03 -0.48 6.31 -39.55 -0.25 -0.73 16 20 Cl -0.08 -1.16 28.95 -51.86 -1.50 -2.66 16 21 C -0.08 -1.48 9.48 -39.14 -0.37 -1.86 16 22 H 0.06 0.75 7.49 -51.93 -0.39 0.36 16 23 H 0.07 0.94 8.13 -51.93 -0.42 0.52 16 24 H 0.07 0.95 6.96 -51.93 -0.36 0.59 16 25 H 0.15 3.15 8.06 -52.49 -0.42 2.73 16 26 H 0.27 7.07 8.30 -40.82 -0.34 6.73 16 27 H 0.13 1.70 5.62 -52.49 -0.29 1.41 16 28 H 0.13 1.19 8.06 -52.49 -0.42 0.77 16 29 H 0.13 1.37 8.06 -52.48 -0.42 0.95 16 30 H 0.15 3.16 8.05 -52.49 -0.42 2.74 16 LS Contribution 280.72 15.07 4.23 4.23 Total: -1.00 -31.76 280.72 -8.93 -40.69 By element: Atomic # 1 Polarization: 4.22 SS G_CDS: -2.70 Total: 1.51 kcal Atomic # 6 Polarization: -11.10 SS G_CDS: -4.13 Total: -15.23 kcal Atomic # 7 Polarization: -43.89 SS G_CDS: 0.20 Total: -43.69 kcal Atomic # 14 Polarization: 20.17 SS G_CDS: -5.03 Total: 15.14 kcal Atomic # 17 Polarization: -1.16 SS G_CDS: -1.50 Total: -2.66 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -31.76 -8.93 -40.69 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000222758311.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.444 kcal (2) G-P(sol) polarization free energy of solvation -31.760 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.684 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.686 kcal (6) G-S(sol) free energy of system = (1) + (5) 75.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds