Wall clock time and date at job start Mon Mar 30 2020 06:36:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.32217 * 125.83873 * 2 1 4 4 C 1.33198 * 109.68315 * 179.97438 * 3 2 1 5 5 C 1.39598 * 125.69576 * 180.02562 * 4 3 2 6 6 H 1.07993 * 120.00051 * 179.97438 * 5 4 3 7 7 C 1.40232 * 119.99911 * 359.97438 * 5 4 3 8 8 N 1.30690 * 120.00247 * 359.97438 * 7 5 4 9 9 Si 1.86805 * 119.99946 * 180.02562 * 7 5 4 10 10 H 1.48499 * 109.47316 * 59.99334 * 9 7 5 11 11 H 1.48498 * 109.47424 * 180.02562 * 9 7 5 12 12 H 1.48504 * 109.46911 * 299.99716 * 9 7 5 13 13 N 1.37639 * 108.60364 * 359.73713 * 4 3 2 14 14 H 0.96994 * 126.62058 * 180.26845 * 13 4 3 15 15 C 1.37513 * 106.76960 * 0.42455 * 13 4 3 16 16 C 1.47279 * 126.68740 * 179.85137 * 15 13 4 17 17 C 1.39948 * 120.15658 * 314.68445 * 16 15 13 18 18 C 1.37805 * 119.83326 * 179.97438 * 17 16 15 19 19 C 1.38587 * 120.16340 * 359.97438 * 18 17 16 20 20 Cl 1.73605 * 119.83869 * 179.97438 * 19 18 17 21 21 C 1.38592 * 120.32498 * 0.02562 * 19 18 17 22 22 C 1.37805 * 120.16452 * 359.97438 * 21 19 18 23 23 H 1.09004 * 109.46697 * 270.03362 * 1 2 3 24 24 H 1.08991 * 109.47493 * 30.03774 * 1 2 3 25 25 H 1.08999 * 109.47144 * 150.04327 * 1 2 3 26 26 H 0.97004 * 120.00241 * 179.97438 * 8 7 5 27 27 H 1.08003 * 120.08617 * 359.95819 * 17 16 15 28 28 H 1.08002 * 119.91889 * 179.71937 * 18 17 16 29 29 H 1.08000 * 119.91774 * 179.97438 * 21 19 18 30 30 H 1.07999 * 120.08308 * 180.02562 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2811 1.0718 0.0000 4 6 3.5605 0.7012 0.0006 5 6 4.6583 1.5635 0.0012 6 1 5.6607 1.1616 0.0021 7 6 4.4596 2.9517 0.0008 8 7 3.2466 3.4381 -0.0007 9 14 5.9286 4.1056 0.0010 10 1 6.7508 3.8605 -1.2111 11 1 5.4531 5.5124 0.0011 12 1 6.7499 3.8611 1.2139 13 7 3.6193 -0.6739 0.0069 14 1 4.4218 -1.2187 0.0124 15 6 2.3208 -1.1266 0.0005 16 6 1.8787 -2.5314 0.0007 17 6 2.4842 -3.4591 -0.8545 18 6 2.0657 -4.7721 -0.8485 19 6 1.0482 -5.1747 0.0020 20 17 0.5271 -6.8307 0.0022 21 6 0.4440 -4.2616 0.8517 22 6 0.8519 -2.9453 0.8567 23 1 -0.3633 0.0006 1.0277 24 1 -0.3634 0.8895 -0.5144 25 1 -0.3633 -0.8904 -0.5132 26 1 3.1091 4.3984 -0.0006 27 1 3.2773 -3.1468 -1.5178 28 1 2.5289 -5.4882 -1.5111 29 1 -0.3486 -4.5824 1.5114 30 1 0.3805 -2.2350 1.5197 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000258756021.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:36:45 Heat of formation + Delta-G solvation = 52.442894 kcal Electronic energy + Delta-G solvation = -16360.400321 eV Core-core repulsion = 13567.355331 eV Total energy + Delta-G solvation = -2793.044990 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.04545 -38.48127 -36.21670 -33.64318 -31.86630 -31.27768 -30.67679 -28.44975 -27.27770 -24.43864 -22.37870 -21.65942 -20.07912 -18.58945 -17.64591 -16.57204 -15.73207 -15.09469 -14.90569 -14.38583 -13.63206 -13.32165 -13.20199 -13.10694 -13.00853 -11.97503 -11.94908 -11.75032 -11.45699 -11.34115 -11.20214 -11.14883 -11.08075 -10.59210 -10.53420 -10.31399 -9.39483 -8.78812 -8.59311 -8.23844 -7.95278 -6.89709 -6.59126 -4.42342 1.34899 1.61712 2.35639 2.95512 3.06776 3.08026 3.35205 3.88982 4.06621 4.47146 4.68400 5.10381 5.11440 5.44258 5.57238 5.65445 5.73613 5.95181 6.04847 6.16693 6.24852 6.45655 6.51156 6.62082 6.64352 6.83658 6.97960 7.11442 7.23444 7.51783 7.86387 8.07439 8.36595 8.76450 9.22903 10.00181 10.31659 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.048514 B = 0.004165 C = 0.003909 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 577.015451 B = 6720.994804 C = 7160.789890 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 C 0.070 3.930 3 N -0.507 5.507 4 C 0.390 3.610 5 C -0.455 4.455 6 H 0.082 0.918 7 C 0.081 3.919 8 N -0.731 5.731 9 Si 0.916 3.084 10 H -0.266 1.266 11 H -0.277 1.277 12 H -0.266 1.266 13 N -0.619 5.619 14 H 0.396 0.604 15 C -0.147 4.147 16 C 0.059 3.941 17 C -0.131 4.131 18 C -0.100 4.100 19 C -0.070 4.070 20 Cl -0.094 7.094 21 C -0.100 4.100 22 C -0.117 4.117 23 H 0.056 0.944 24 H 0.062 0.938 25 H 0.054 0.946 26 H 0.277 0.723 27 H 0.122 0.878 28 H 0.124 0.876 29 H 0.126 0.874 30 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.460 -10.380 0.125 10.668 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.071 4.071 3 N -0.228 5.228 4 C 0.150 3.850 5 C -0.494 4.494 6 H 0.100 0.900 7 C -0.145 4.145 8 N -0.354 5.354 9 Si 0.740 3.260 10 H -0.191 1.191 11 H -0.202 1.202 12 H -0.191 1.191 13 N -0.228 5.228 14 H 0.231 0.769 15 C -0.257 4.257 16 C 0.057 3.943 17 C -0.150 4.150 18 C -0.119 4.119 19 C -0.096 4.096 20 Cl -0.065 7.065 21 C -0.119 4.119 22 C -0.137 4.137 23 H 0.075 0.925 24 H 0.081 0.919 25 H 0.073 0.927 26 H 0.088 0.912 27 H 0.140 0.860 28 H 0.142 0.858 29 H 0.144 0.856 30 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -2.984 -9.485 0.124 9.944 hybrid contribution 1.364 -0.779 -0.050 1.571 sum -1.620 -10.264 0.073 10.391 Atomic orbital electron populations 1.19987 0.90162 1.01218 1.00754 1.21241 0.94993 0.88944 1.01922 1.71058 0.99083 1.25599 1.27048 1.20081 0.93087 0.78185 0.93645 1.18164 0.91458 0.90148 1.49582 0.90016 1.25760 0.96829 0.98545 0.93350 1.69991 1.21322 1.14016 1.30074 0.86266 0.81253 0.78791 0.79710 1.19058 1.20171 1.19061 1.43211 1.05496 1.07878 1.66218 0.76877 1.18843 0.85394 0.91063 1.30436 1.18133 0.93480 0.90481 0.92256 1.21248 1.01746 0.92245 0.99749 1.20812 0.96316 0.96309 0.98482 1.20785 1.01001 0.84881 1.02949 1.98322 1.90395 1.19629 1.98181 1.20852 0.99868 0.92671 0.98486 1.21226 0.98790 0.94568 0.99077 0.92526 0.91922 0.92712 0.91241 0.85975 0.85848 0.85632 0.85224 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -1.21 9.23 36.01 0.33 -0.88 16 2 C 0.07 1.65 7.13 -82.15 -0.59 1.07 16 3 N -0.51 -13.87 9.32 -8.44 -0.08 -13.95 16 4 C 0.39 10.29 7.58 -155.47 -1.18 9.12 16 5 C -0.45 -11.69 9.44 -38.33 -0.36 -12.05 16 6 H 0.08 1.92 7.85 -52.49 -0.41 1.51 16 7 C 0.08 2.01 5.50 -17.29 -0.10 1.92 16 8 N -0.73 -19.34 11.87 55.56 0.66 -18.68 16 9 Si 0.92 18.15 29.56 -169.99 -5.03 13.12 16 10 H -0.27 -5.18 7.11 56.52 0.40 -4.78 16 11 H -0.28 -5.38 7.11 56.52 0.40 -4.98 16 12 H -0.27 -5.19 7.11 56.52 0.40 -4.79 16 13 N -0.62 -14.04 6.31 -8.37 -0.05 -14.09 16 14 H 0.40 7.78 8.96 -40.82 -0.37 7.41 16 15 C -0.15 -3.22 6.71 -81.37 -0.55 -3.77 16 16 C 0.06 1.07 5.60 -104.94 -0.59 0.48 16 17 C -0.13 -2.13 9.80 -39.10 -0.38 -2.51 16 18 C -0.10 -1.45 9.81 -39.61 -0.39 -1.84 16 19 C -0.07 -0.99 6.33 -39.32 -0.25 -1.24 16 20 Cl -0.09 -1.18 28.95 -51.86 -1.50 -2.69 16 21 C -0.10 -1.43 9.81 -39.61 -0.39 -1.82 16 22 C -0.12 -1.90 8.75 -39.10 -0.34 -2.24 16 23 H 0.06 0.98 8.14 -51.93 -0.42 0.56 16 24 H 0.06 1.20 8.14 -51.93 -0.42 0.78 16 25 H 0.05 0.93 7.54 -51.93 -0.39 0.54 16 26 H 0.28 6.65 8.29 -40.82 -0.34 6.31 16 27 H 0.12 1.92 8.06 -52.48 -0.42 1.49 16 28 H 0.12 1.52 8.06 -52.49 -0.42 1.10 16 29 H 0.13 1.51 8.06 -52.49 -0.42 1.09 16 30 H 0.13 2.02 7.51 -52.49 -0.39 1.63 16 LS Contribution 283.61 15.07 4.27 4.27 Total: -1.00 -28.60 283.61 -9.31 -37.91 By element: Atomic # 1 Polarization: 10.68 SS G_CDS: -2.81 Total: 7.87 kcal Atomic # 6 Polarization: -9.00 SS G_CDS: -4.77 Total: -13.77 kcal Atomic # 7 Polarization: -47.25 SS G_CDS: 0.53 Total: -46.72 kcal Atomic # 14 Polarization: 18.15 SS G_CDS: -5.03 Total: 13.12 kcal Atomic # 17 Polarization: -1.18 SS G_CDS: -1.50 Total: -2.69 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -28.60 -9.31 -37.91 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258756021.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.351 kcal (2) G-P(sol) polarization free energy of solvation -28.599 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.309 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.909 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.443 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds