Wall clock time and date at job start Mon Mar 30 2020 06:36:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.32216 * 125.84051 * 2 1 4 4 C 1.33192 * 109.67825 * 179.78229 * 3 2 1 5 5 C 1.39606 * 125.69388 * 180.25166 * 4 3 2 6 6 H 1.08003 * 119.99789 * 180.18368 * 5 4 3 7 7 C 1.40246 * 120.00391 * 0.18172 * 5 4 3 8 8 N 1.30680 * 120.00058 * 0.02562 * 7 5 4 9 9 Si 1.86809 * 120.00014 * 180.02562 * 7 5 4 10 10 H 1.48505 * 109.46810 * 0.02562 * 9 7 5 11 11 H 1.48505 * 109.47015 * 120.00005 * 9 7 5 12 12 H 1.48498 * 109.46968 * 240.00161 * 9 7 5 13 13 N 1.37623 * 108.60283 * 0.40921 * 4 3 2 14 14 H 0.97001 * 126.61559 * 179.87004 * 13 4 3 15 15 C 1.37499 * 106.77304 * 359.59853 * 13 4 3 16 16 C 1.47310 * 126.68479 * 180.26359 * 15 13 4 17 17 C 1.39950 * 120.16525 * 224.70697 * 16 15 13 18 18 C 1.37831 * 119.84372 * 179.69995 * 17 16 15 19 19 C 1.38450 * 120.19334 * 0.57245 * 18 17 16 20 20 C 1.38548 * 120.34110 * 359.71970 * 19 18 17 21 21 Cl 1.73597 * 119.92824 * 179.97438 * 20 19 18 22 22 C 1.37991 * 120.14596 * 359.97438 * 20 19 18 23 23 H 1.09005 * 109.47139 * 269.95961 * 1 2 3 24 24 H 1.08999 * 109.47604 * 29.95818 * 1 2 3 25 25 H 1.09002 * 109.47439 * 149.95809 * 1 2 3 26 26 H 0.97004 * 120.00188 * 180.02562 * 8 7 5 27 27 H 1.07999 * 120.07631 * 359.97438 * 17 16 15 28 28 H 1.08004 * 119.90406 * 180.27431 * 18 17 16 29 29 H 1.07996 * 119.83306 * 179.70294 * 19 18 17 30 30 H 1.08001 * 120.09766 * 180.02562 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2811 1.0718 0.0000 4 6 3.5604 0.7011 0.0048 5 6 4.6583 1.5633 0.0112 6 1 5.6607 1.1612 0.0117 7 6 4.4597 2.9516 0.0170 8 7 3.2469 3.4382 0.0168 9 14 5.9290 4.1053 0.0249 10 1 7.1830 3.3098 0.0231 11 1 5.8882 4.9670 -1.1839 12 1 5.8836 4.9562 1.2411 13 7 3.6191 -0.6739 -0.0013 14 1 4.4216 -1.2188 -0.0015 15 6 2.3207 -1.1264 -0.0008 16 6 1.8784 -2.5316 -0.0006 17 6 0.8467 -2.9443 -0.8513 18 6 0.4424 -4.2619 -0.8502 19 6 1.0458 -5.1747 -0.0018 20 6 2.0638 -4.7734 0.8480 21 17 2.8124 -5.9267 1.9077 22 6 2.4839 -3.4590 0.8539 23 1 -0.3634 -0.0007 1.0277 24 1 -0.3634 0.8903 -0.5132 25 1 -0.3634 -0.8896 -0.5145 26 1 3.1095 4.3985 0.0204 27 1 0.3714 -2.2328 -1.5104 28 1 -0.3508 -4.5824 -1.5095 29 1 0.7211 -6.2047 -0.0023 30 1 3.2778 -3.1472 1.5164 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000258806190.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:36:47 Heat of formation + Delta-G solvation = 54.311818 kcal Electronic energy + Delta-G solvation = -16425.687183 eV Core-core repulsion = 13632.723235 eV Total energy + Delta-G solvation = -2792.963948 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.04888 -38.48388 -36.24384 -33.64529 -31.85663 -31.49283 -30.35788 -28.52881 -27.27272 -24.55982 -22.24314 -21.70777 -20.08493 -18.61764 -17.67895 -16.37773 -15.66202 -15.22367 -14.95012 -14.49854 -13.67868 -13.47344 -13.13468 -12.99703 -12.96050 -12.02090 -11.93102 -11.66592 -11.46660 -11.34458 -11.23309 -11.17399 -10.89366 -10.70962 -10.49368 -10.23539 -9.43163 -8.79995 -8.49605 -8.24889 -7.96397 -6.89746 -6.58642 -4.41555 1.41401 1.54148 2.31041 2.93868 3.07877 3.11673 3.36405 3.89884 4.06684 4.48353 4.68468 5.09909 5.20646 5.45232 5.49540 5.67490 5.69625 5.95085 6.02226 6.15758 6.30647 6.47494 6.50840 6.62179 6.65707 6.82964 6.99506 7.12786 7.21964 7.52605 7.87336 8.09014 8.37514 8.77576 9.23739 10.00843 10.32372 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.030110 B = 0.004833 C = 0.004305 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 929.703497 B = 5792.690133 C = 6502.723116 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 C 0.071 3.929 3 N -0.506 5.506 4 C 0.390 3.610 5 C -0.454 4.454 6 H 0.082 0.918 7 C 0.081 3.919 8 N -0.731 5.731 9 Si 0.915 3.085 10 H -0.262 1.262 11 H -0.273 1.273 12 H -0.273 1.273 13 N -0.619 5.619 14 H 0.397 0.603 15 C -0.147 4.147 16 C 0.067 3.933 17 C -0.127 4.127 18 C -0.099 4.099 19 C -0.149 4.149 20 C -0.021 4.021 21 Cl -0.090 7.090 22 C -0.134 4.134 23 H 0.055 0.945 24 H 0.063 0.937 25 H 0.057 0.943 26 H 0.275 0.725 27 H 0.129 0.871 28 H 0.125 0.875 29 H 0.123 0.877 30 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.658 -10.542 -0.309 10.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.070 4.070 3 N -0.227 5.227 4 C 0.150 3.850 5 C -0.493 4.493 6 H 0.101 0.899 7 C -0.145 4.145 8 N -0.354 5.354 9 Si 0.739 3.261 10 H -0.186 1.186 11 H -0.198 1.198 12 H -0.198 1.198 13 N -0.228 5.228 14 H 0.231 0.769 15 C -0.257 4.257 16 C 0.064 3.936 17 C -0.145 4.145 18 C -0.118 4.118 19 C -0.169 4.169 20 C -0.047 4.047 21 Cl -0.061 7.061 22 C -0.154 4.154 23 H 0.074 0.926 24 H 0.082 0.918 25 H 0.076 0.924 26 H 0.086 0.914 27 H 0.147 0.853 28 H 0.143 0.857 29 H 0.141 0.859 30 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -3.058 -9.610 -0.216 10.087 hybrid contribution 1.479 -0.724 0.203 1.659 sum -1.580 -10.334 -0.013 10.454 Atomic orbital electron populations 1.20071 0.90185 1.01262 1.01014 1.21220 0.94992 0.88892 1.01896 1.71061 0.99087 1.25568 1.27023 1.20091 0.93103 0.78181 0.93642 1.18238 0.91491 0.90115 1.49427 0.89936 1.25766 0.96816 0.98565 0.93329 1.70007 1.21281 1.13834 1.30292 0.86163 0.81409 0.79961 0.78558 1.18611 1.19829 1.19831 1.43211 1.05500 1.07903 1.66139 0.76858 1.18787 0.85433 0.90902 1.30626 1.17950 0.93404 0.90143 0.92069 1.21398 0.98607 0.95513 0.99024 1.20914 0.99463 0.92993 0.98394 1.20853 0.97686 1.00125 0.98188 1.20758 0.97747 0.90306 0.95919 1.98335 1.81936 1.60217 1.65598 1.21188 1.02541 0.91066 1.00572 0.92594 0.91832 0.92412 0.91366 0.85325 0.85683 0.85919 0.85849 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.30 10.22 36.00 0.37 -0.93 16 2 C 0.07 1.69 7.13 -82.16 -0.59 1.10 16 3 N -0.51 -13.94 9.32 -8.45 -0.08 -14.02 16 4 C 0.39 10.37 7.58 -155.49 -1.18 9.20 16 5 C -0.45 -11.76 9.44 -38.32 -0.36 -12.12 16 6 H 0.08 1.97 7.85 -52.48 -0.41 1.56 16 7 C 0.08 2.02 5.50 -17.29 -0.10 1.93 16 8 N -0.73 -19.43 11.87 55.56 0.66 -18.77 16 9 Si 0.91 18.28 29.56 -169.99 -5.03 13.25 16 10 H -0.26 -5.11 7.11 56.52 0.40 -4.71 16 11 H -0.27 -5.38 7.11 56.52 0.40 -4.98 16 12 H -0.27 -5.39 7.11 56.52 0.40 -4.99 16 13 N -0.62 -14.24 6.31 -8.38 -0.05 -14.30 16 14 H 0.40 7.98 8.96 -40.82 -0.37 7.61 16 15 C -0.15 -3.27 6.72 -81.37 -0.55 -3.81 16 16 C 0.07 1.23 5.72 -104.95 -0.60 0.63 16 17 C -0.13 -2.02 8.60 -39.09 -0.34 -2.35 16 18 C -0.10 -1.33 10.03 -39.65 -0.40 -1.73 16 19 C -0.15 -2.03 9.83 -39.39 -0.39 -2.42 16 20 C -0.02 -0.32 6.31 -39.56 -0.25 -0.57 16 21 Cl -0.09 -1.22 28.95 -51.86 -1.50 -2.73 16 22 C -0.13 -2.31 9.58 -39.05 -0.37 -2.68 16 23 H 0.06 1.02 8.14 -51.93 -0.42 0.59 16 24 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 25 H 0.06 0.94 5.31 -51.93 -0.28 0.67 16 26 H 0.28 6.61 8.29 -40.82 -0.34 6.27 16 27 H 0.13 1.97 6.58 -52.49 -0.35 1.63 16 28 H 0.13 1.29 8.06 -52.48 -0.42 0.87 16 29 H 0.12 1.39 8.06 -52.49 -0.42 0.97 16 30 H 0.12 2.14 8.06 -52.49 -0.42 1.71 16 LS Contribution 281.42 15.07 4.24 4.24 Total: -1.00 -28.94 281.42 -9.15 -38.09 By element: Atomic # 1 Polarization: 10.63 SS G_CDS: -2.65 Total: 7.98 kcal Atomic # 6 Polarization: -9.01 SS G_CDS: -4.74 Total: -13.76 kcal Atomic # 7 Polarization: -47.61 SS G_CDS: 0.53 Total: -47.08 kcal Atomic # 14 Polarization: 18.28 SS G_CDS: -5.03 Total: 13.25 kcal Atomic # 17 Polarization: -1.22 SS G_CDS: -1.50 Total: -2.73 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -28.94 -9.15 -38.09 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258806190.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.402 kcal (2) G-P(sol) polarization free energy of solvation -28.942 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.460 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.148 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.090 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.312 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds