Wall clock time and date at job start Mon Mar 30 2020 06:35:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38108 * 120.02133 * 2 1 4 4 C 1.38274 * 120.08553 * 180.02562 * 3 2 1 5 5 C 1.38448 * 120.14440 * 359.97438 * 4 3 2 6 6 Cl 1.73592 * 119.97479 * 179.97438 * 5 4 3 7 7 C 1.38182 * 120.05264 * 359.72603 * 5 4 3 8 8 C 1.38940 * 120.02497 * 180.02562 * 2 1 3 9 9 N 1.39823 * 120.07366 * 359.97438 * 8 2 1 10 10 C 1.36215 * 125.42669 * 132.63317 * 9 8 2 11 11 C 1.34654 * 108.44662 * 179.97438 * 10 9 8 12 12 C 1.46380 * 107.14998 * 359.97438 * 11 10 9 13 13 C 1.41271 * 126.48481 * 179.73702 * 12 11 10 14 14 H 1.07999 * 119.99825 * 0.02562 * 13 12 11 15 15 C 1.39878 * 119.99980 * 180.02562 * 13 12 11 16 16 N 1.30888 * 119.99485 * 0.02562 * 15 13 12 17 17 Si 1.86792 * 119.99979 * 180.02562 * 15 13 12 18 18 H 1.48498 * 109.47214 * 60.00130 * 17 15 13 19 19 H 1.48506 * 109.46945 * 180.02562 * 17 15 13 20 20 H 1.48501 * 109.47024 * 299.99985 * 17 15 13 21 21 N 1.33001 * 107.02528 * 0.02562 * 12 11 10 22 22 H 1.09006 * 109.47176 * 264.64481 * 1 2 3 23 23 H 1.08998 * 109.47379 * 24.64652 * 1 2 3 24 24 H 1.09001 * 109.47440 * 144.65055 * 1 2 3 25 25 H 1.07995 * 119.96030 * 0.05067 * 3 2 1 26 26 H 1.08003 * 119.92127 * 180.02562 * 4 3 2 27 27 H 1.07994 * 120.04795 * 180.28984 * 7 5 4 28 28 H 1.07994 * 125.77407 * 359.97438 * 10 9 8 29 29 H 1.07997 * 126.41635 * 179.97438 * 11 10 9 30 30 H 0.97004 * 119.99473 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1980 1.1958 0.0000 4 6 3.5808 1.1973 -0.0005 5 6 4.2774 0.0009 -0.0005 6 17 6.0133 0.0080 -0.0019 7 6 3.5919 -1.1989 0.0057 8 6 2.2023 -1.2030 -0.0005 9 7 1.5052 -2.4151 -0.0005 10 6 1.7630 -3.4741 -0.8175 11 6 0.8906 -4.4580 -0.5277 12 6 0.0300 -3.9682 0.5504 13 6 -1.0312 -4.6710 1.1632 14 1 -1.2723 -5.6732 0.8410 15 6 -1.7697 -4.0688 2.1872 16 7 -1.4777 -2.8540 2.5772 17 14 -3.1724 -4.9984 2.9980 18 1 -2.6492 -6.2427 3.6170 19 1 -3.7911 -4.1462 4.0451 20 1 -4.1926 -5.3450 1.9760 21 7 0.4323 -2.7338 0.8394 22 1 -0.3634 -0.0959 1.0232 23 1 -0.3634 0.9340 -0.4285 24 1 -0.3634 -0.8382 -0.5946 25 1 1.6578 2.1309 0.0008 26 1 4.1184 2.1340 -0.0001 27 1 4.1354 -2.1322 0.0104 28 1 2.5362 -3.5173 -1.5702 29 1 0.8362 -5.4268 -1.0018 30 1 -1.9901 -2.4363 3.2871 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259085163.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:35:51 Heat of formation + Delta-G solvation = 85.193590 kcal Electronic energy + Delta-G solvation = -16696.492671 eV Core-core repulsion = 13904.867858 eV Total energy + Delta-G solvation = -2791.624814 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -39.86356 -38.26668 -36.35276 -33.66797 -32.27212 -31.82877 -28.91374 -28.24447 -26.60142 -25.34835 -22.55627 -21.18255 -19.73479 -19.30278 -17.14877 -16.51176 -15.50717 -15.47092 -14.77525 -14.30950 -13.78139 -13.29956 -12.92565 -12.75182 -12.43570 -12.37092 -12.30789 -11.92832 -11.22670 -11.09654 -11.07418 -10.96512 -10.85865 -10.77029 -10.52159 -10.04990 -9.49086 -8.85494 -8.52047 -8.28274 -7.68869 -7.13788 -6.47693 -4.40586 1.38759 1.45217 2.24133 3.08938 3.16428 3.18751 3.27659 3.84158 3.98169 4.08482 4.24664 5.02192 5.18792 5.34709 5.52531 5.55609 5.63992 5.86974 5.97612 6.09521 6.34170 6.38305 6.47718 6.60281 6.76410 6.86200 7.00418 7.05354 7.18415 7.28933 7.65317 8.29234 8.57081 8.81923 9.06422 9.77551 10.48617 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.031916 B = 0.005189 C = 0.004831 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 877.096999 B = 5395.236614 C = 5794.394188 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C -0.078 4.078 3 C -0.097 4.097 4 C -0.134 4.134 5 C -0.023 4.023 6 Cl -0.082 7.082 7 C -0.137 4.137 8 C 0.211 3.789 9 N -0.383 5.383 10 C 0.021 3.979 11 C -0.279 4.279 12 C 0.208 3.792 13 C -0.436 4.436 14 H 0.082 0.918 15 C 0.071 3.929 16 N -0.766 5.766 17 Si 0.910 3.090 18 H -0.268 1.268 19 H -0.281 1.281 20 H -0.267 1.267 21 N -0.314 5.314 22 H 0.087 0.913 23 H 0.049 0.951 24 H 0.071 0.929 25 H 0.131 0.869 26 H 0.129 0.871 27 H 0.131 0.869 28 H 0.142 0.858 29 H 0.127 0.873 30 H 0.273 0.727 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.794 6.339 -4.522 10.334 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.080 4.080 3 C -0.116 4.116 4 C -0.154 4.154 5 C -0.050 4.050 6 Cl -0.054 7.054 7 C -0.159 4.159 8 C 0.114 3.886 9 N -0.159 5.159 10 C -0.115 4.115 11 C -0.310 4.310 12 C 0.052 3.948 13 C -0.476 4.476 14 H 0.100 0.900 15 C -0.149 4.149 16 N -0.394 5.394 17 Si 0.735 3.265 18 H -0.192 1.192 19 H -0.206 1.206 20 H -0.192 1.192 21 N -0.140 5.140 22 H 0.105 0.895 23 H 0.068 0.932 24 H 0.090 0.910 25 H 0.149 0.851 26 H 0.146 0.854 27 H 0.149 0.851 28 H 0.160 0.840 29 H 0.145 0.855 30 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 6.794 7.546 -3.727 10.816 hybrid contribution -0.143 -1.233 -0.142 1.250 sum 6.651 6.312 -3.869 9.952 Atomic orbital electron populations 1.20645 0.89459 1.01037 1.04257 1.20102 0.97620 0.91291 0.99027 1.20819 0.92992 0.97416 1.00323 1.20858 0.94115 0.96394 1.04032 1.20482 0.83596 0.94571 1.06342 1.98337 1.10901 1.98968 1.97147 1.20898 0.92782 0.97403 1.04839 1.17027 0.88812 0.84884 0.97860 1.46214 1.29550 1.08929 1.31199 1.22079 1.01529 0.89664 0.98191 1.22659 1.02764 0.99877 1.05680 1.20764 0.92864 0.90462 0.90669 1.18589 1.11566 1.01006 1.16390 0.89950 1.25830 0.97937 0.94796 0.96373 1.69922 1.34979 1.11929 1.22546 0.86345 0.81048 0.79990 0.79076 1.19239 1.20594 1.19225 1.79118 1.03375 1.16198 1.15281 0.89454 0.93233 0.90984 0.85089 0.85354 0.85097 0.84044 0.85512 0.91599 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.86 8.81 36.01 0.32 -1.55 16 2 C -0.08 -1.44 5.90 -104.41 -0.62 -2.05 16 3 C -0.10 -1.44 9.67 -39.62 -0.38 -1.82 16 4 C -0.13 -1.89 9.83 -39.49 -0.39 -2.28 16 5 C -0.02 -0.35 6.32 -39.52 -0.25 -0.60 16 6 Cl -0.08 -1.10 28.95 -51.86 -1.50 -2.60 16 7 C -0.14 -2.41 9.41 -39.33 -0.37 -2.78 16 8 C 0.21 4.26 6.20 -83.68 -0.52 3.74 16 9 N -0.38 -8.92 3.14 -10.66 -0.03 -8.95 16 10 C 0.02 0.45 11.04 -16.87 -0.19 0.27 16 11 C -0.28 -6.51 11.02 -37.58 -0.41 -6.93 16 12 C 0.21 5.64 6.92 -82.93 -0.57 5.06 16 13 C -0.44 -11.73 9.43 -37.82 -0.36 -12.08 16 14 H 0.08 2.07 7.84 -52.49 -0.41 1.66 16 15 C 0.07 1.84 5.49 -17.34 -0.10 1.75 16 16 N -0.77 -20.81 11.96 55.54 0.66 -20.14 16 17 Si 0.91 19.13 29.56 -169.99 -5.02 14.10 16 18 H -0.27 -5.55 7.11 56.52 0.40 -5.15 16 19 H -0.28 -5.80 7.11 56.52 0.40 -5.40 16 20 H -0.27 -5.51 7.11 56.52 0.40 -5.11 16 21 N -0.31 -8.51 9.13 33.26 0.30 -8.21 16 22 H 0.09 1.87 8.14 -51.93 -0.42 1.45 16 23 H 0.05 0.76 8.05 -51.93 -0.42 0.35 16 24 H 0.07 1.58 7.21 -51.93 -0.37 1.21 16 25 H 0.13 1.57 8.06 -52.49 -0.42 1.14 16 26 H 0.13 1.45 8.06 -52.48 -0.42 1.03 16 27 H 0.13 2.22 8.02 -52.49 -0.42 1.80 16 28 H 0.14 2.47 8.06 -52.49 -0.42 2.04 16 29 H 0.13 2.61 8.06 -52.49 -0.42 2.19 16 30 H 0.27 6.84 8.30 -40.82 -0.34 6.51 16 LS Contribution 283.88 15.07 4.28 4.28 Total: -1.00 -29.06 283.88 -8.02 -37.08 By element: Atomic # 1 Polarization: 6.58 SS G_CDS: -2.87 Total: 3.71 kcal Atomic # 6 Polarization: -15.44 SS G_CDS: -3.83 Total: -19.27 kcal Atomic # 7 Polarization: -38.24 SS G_CDS: 0.93 Total: -37.30 kcal Atomic # 14 Polarization: 19.13 SS G_CDS: -5.02 Total: 14.10 kcal Atomic # 17 Polarization: -1.10 SS G_CDS: -1.50 Total: -2.60 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -29.06 -8.02 -37.08 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259085163.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 122.276 kcal (2) G-P(sol) polarization free energy of solvation -29.061 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 93.214 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.021 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.082 kcal (6) G-S(sol) free energy of system = (1) + (5) 85.194 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds