Wall clock time and date at job start Mon Mar 30 2020 06:39:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.36067 * 126.39063 * 2 1 4 4 C 1.38577 * 106.91970 * 180.02562 * 3 2 1 5 5 C 1.48225 * 125.96443 * 179.97438 * 4 3 2 6 6 C 1.39465 * 120.11668 * 180.02562 * 5 4 3 7 7 C 1.37958 * 119.87978 * 180.02562 * 6 5 4 8 8 C 1.38482 * 120.11893 * 0.02562 * 7 6 5 9 9 Cl 1.73599 * 119.87953 * 179.97438 * 8 7 6 10 10 C 1.38480 * 120.23327 * 0.23242 * 8 7 6 11 11 C 1.37947 * 120.11777 * 359.48810 * 10 8 7 12 12 N 1.33542 * 108.06894 * 0.22710 * 4 3 2 13 13 C 1.32830 * 109.19924 * 359.62502 * 12 4 3 14 14 C 1.39942 * 125.70552 * 180.14430 * 13 12 4 15 15 H 1.08003 * 119.99970 * 180.26547 * 14 13 12 16 16 C 1.40168 * 120.00065 * 0.27376 * 14 13 12 17 17 N 1.30725 * 119.99555 * 359.97438 * 16 14 13 18 18 Si 1.86799 * 120.00263 * 179.97438 * 16 14 13 19 19 H 1.48503 * 109.46884 * 359.97438 * 18 16 14 20 20 H 1.48495 * 109.47312 * 119.99248 * 18 16 14 21 21 H 1.48498 * 109.46844 * 239.99989 * 18 16 14 22 22 H 1.08999 * 109.46884 * 89.97902 * 1 2 3 23 23 H 1.08998 * 109.46851 * 209.97248 * 1 2 3 24 24 H 1.08993 * 109.47298 * 329.97690 * 1 2 3 25 25 H 1.08002 * 126.54209 * 0.02562 * 3 2 1 26 26 H 1.07995 * 120.05840 * 0.04350 * 6 5 4 27 27 H 1.08001 * 119.93781 * 179.97438 * 7 6 5 28 28 H 1.07998 * 119.93228 * 179.71836 * 10 8 7 29 29 H 1.08007 * 120.05535 * 180.27436 * 11 10 8 30 30 H 0.97007 * 119.99642 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2723 1.0953 0.0000 4 6 3.5788 0.6334 -0.0006 5 6 4.7994 1.4743 -0.0013 6 6 6.0601 0.8779 -0.0024 7 6 7.1929 1.6653 -0.0026 8 6 7.0799 3.0455 -0.0011 9 17 8.5095 4.0303 -0.0007 10 6 5.8305 3.6428 0.0053 11 6 4.6914 2.8648 -0.0003 12 7 3.5462 -0.7016 -0.0060 13 6 2.2814 -1.1076 -0.0006 14 6 1.8512 -2.4393 -0.0009 15 1 0.7951 -2.6655 -0.0005 16 6 2.7907 -3.4794 -0.0014 17 7 4.0690 -3.2054 -0.0022 18 14 2.2164 -5.2569 -0.0011 19 1 0.7320 -5.2974 0.0004 20 1 2.7295 -5.9431 -1.2139 21 1 2.7311 -5.9431 1.2111 22 1 -0.3633 0.0004 -1.0277 23 1 -0.3633 -0.8902 0.5134 24 1 -0.3633 0.8897 0.5142 25 1 1.9553 2.1278 0.0004 26 1 6.1494 -0.1983 -0.0034 27 1 8.1697 1.2044 -0.0030 28 1 5.7480 4.7196 0.0110 29 1 3.7174 3.3317 0.0003 30 1 4.7192 -3.9253 -0.0030 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259495995.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:35 Heat of formation + Delta-G solvation = 66.774089 kcal Electronic energy + Delta-G solvation = -16390.254142 eV Core-core repulsion = 13597.830599 eV Total energy + Delta-G solvation = -2792.423543 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.05565 -38.45299 -36.12238 -33.44065 -32.82577 -30.69855 -30.30937 -28.30366 -26.06075 -24.76787 -22.31972 -22.03200 -19.58103 -19.06143 -16.97135 -16.55692 -15.58389 -14.78697 -14.56702 -14.44932 -14.29791 -13.24749 -13.11175 -13.02620 -12.76025 -12.54038 -12.01143 -11.95486 -11.28481 -11.21575 -11.14966 -11.00511 -10.96237 -10.54589 -10.37236 -10.13993 -9.32819 -8.76127 -8.58274 -7.97108 -7.77898 -6.86386 -6.47114 -4.35784 1.49435 1.80796 2.46626 2.99429 3.12696 3.15817 3.45425 3.95627 4.13007 4.27343 4.81754 5.22589 5.27644 5.47887 5.54246 5.63348 5.82023 5.91129 5.93500 6.06206 6.12453 6.20429 6.40064 6.64270 6.74418 6.80555 7.16963 7.27528 7.35871 7.51153 7.88484 8.12016 8.37825 8.87444 9.16393 10.06324 10.45791 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.027878 B = 0.004933 C = 0.004201 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1004.128630 B = 5674.930480 C = 6663.912498 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.097 3.903 2 N -0.505 5.505 3 C -0.132 4.132 4 C 0.023 3.977 5 C 0.043 3.957 6 C -0.089 4.089 7 C -0.111 4.111 8 C -0.058 4.058 9 Cl -0.095 7.095 10 C -0.111 4.111 11 C -0.118 4.118 12 N -0.498 5.498 13 C 0.376 3.624 14 C -0.463 4.463 15 H 0.079 0.921 16 C 0.083 3.917 17 N -0.742 5.742 18 Si 0.911 3.089 19 H -0.264 1.264 20 H -0.275 1.275 21 H -0.275 1.275 22 H 0.052 0.948 23 H 0.076 0.924 24 H 0.060 0.940 25 H 0.142 0.858 26 H 0.145 0.855 27 H 0.126 0.874 28 H 0.124 0.876 29 H 0.126 0.874 30 H 0.272 0.728 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.649 7.820 0.092 7.848 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 N -0.192 5.192 3 C -0.266 4.266 4 C -0.109 4.109 5 C 0.042 3.958 6 C -0.108 4.108 7 C -0.130 4.130 8 C -0.085 4.085 9 Cl -0.067 7.067 10 C -0.130 4.130 11 C -0.137 4.137 12 N -0.218 5.218 13 C 0.133 3.867 14 C -0.502 4.502 15 H 0.097 0.903 16 C -0.141 4.141 17 N -0.366 5.366 18 Si 0.735 3.265 19 H -0.188 1.188 20 H -0.200 1.200 21 H -0.200 1.200 22 H 0.071 0.929 23 H 0.094 0.906 24 H 0.079 0.921 25 H 0.160 0.840 26 H 0.163 0.837 27 H 0.144 0.856 28 H 0.142 0.858 29 H 0.144 0.856 30 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 1.526 7.347 0.087 7.504 hybrid contribution -0.953 -0.068 -0.010 0.955 sum 0.573 7.279 0.077 7.301 Atomic orbital electron populations 1.21509 0.79593 1.02361 1.01268 1.45308 1.05402 1.07027 1.61498 1.22157 0.91057 0.90943 1.22440 1.19417 0.89233 0.92691 1.09553 1.18278 0.91911 0.91402 0.94221 1.21393 0.90417 1.01285 0.97695 1.20960 0.99470 0.91202 1.01333 1.20817 0.86924 0.91421 1.09349 1.98316 1.40056 1.70985 1.97330 1.20760 0.90536 0.99727 1.01988 1.21024 0.97786 0.92858 1.02062 1.71331 1.17075 1.05844 1.27536 1.20221 0.83145 0.87525 0.95830 1.18134 0.94178 0.86915 1.51018 0.90281 1.25661 0.94415 1.00550 0.93473 1.70015 1.01102 1.33405 1.32121 0.86235 0.79753 0.82046 0.78426 1.18799 1.19997 1.20004 0.92919 0.90570 0.92096 0.84003 0.83688 0.85624 0.85770 0.85634 0.91698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.66 10.93 59.85 0.65 2.32 16 2 N -0.50 -11.53 3.20 -122.81 -0.39 -11.92 16 3 C -0.13 -2.91 11.01 -15.55 -0.17 -3.09 16 4 C 0.02 0.55 6.90 -82.89 -0.57 -0.02 16 5 C 0.04 0.90 5.88 -104.88 -0.62 0.28 16 6 C -0.09 -1.77 9.69 -39.23 -0.38 -2.15 16 7 C -0.11 -1.87 9.81 -39.59 -0.39 -2.26 16 8 C -0.06 -0.92 6.33 -39.40 -0.25 -1.17 16 9 Cl -0.10 -1.31 28.95 -51.86 -1.50 -2.81 16 10 C -0.11 -1.71 9.81 -39.60 -0.39 -2.09 16 11 C -0.12 -2.01 9.57 -39.23 -0.38 -2.39 16 12 N -0.50 -13.76 9.03 -9.03 -0.08 -13.84 16 13 C 0.38 10.08 7.41 -155.70 -1.15 8.92 16 14 C -0.46 -12.12 8.98 -38.22 -0.34 -12.46 16 15 H 0.08 1.91 7.11 -52.48 -0.37 1.53 16 16 C 0.08 2.11 5.50 -17.30 -0.10 2.01 16 17 N -0.74 -19.97 11.88 55.56 0.66 -19.31 16 18 Si 0.91 18.61 29.56 -169.99 -5.03 13.59 16 19 H -0.26 -5.23 7.11 56.52 0.40 -4.83 16 20 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 21 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 22 H 0.05 0.83 8.14 -51.93 -0.42 0.40 16 23 H 0.08 1.27 7.33 -51.93 -0.38 0.89 16 24 H 0.06 0.87 8.14 -51.93 -0.42 0.44 16 25 H 0.14 2.59 7.31 -52.49 -0.38 2.20 16 26 H 0.15 3.17 7.85 -52.49 -0.41 2.76 16 27 H 0.13 1.86 8.06 -52.49 -0.42 1.43 16 28 H 0.12 1.57 8.06 -52.49 -0.42 1.15 16 29 H 0.13 1.89 7.02 -52.48 -0.37 1.52 16 30 H 0.27 6.66 8.29 -40.82 -0.34 6.32 16 LS Contribution 283.08 15.07 4.27 4.27 Total: -1.00 -29.73 283.08 -8.90 -38.63 By element: Atomic # 1 Polarization: 6.25 SS G_CDS: -2.74 Total: 3.51 kcal Atomic # 6 Polarization: -8.02 SS G_CDS: -4.08 Total: -12.10 kcal Atomic # 7 Polarization: -45.26 SS G_CDS: 0.19 Total: -45.07 kcal Atomic # 14 Polarization: 18.61 SS G_CDS: -5.03 Total: 13.59 kcal Atomic # 17 Polarization: -1.31 SS G_CDS: -1.50 Total: -2.81 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -29.73 -8.90 -38.63 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259495995.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.402 kcal (2) G-P(sol) polarization free energy of solvation -29.729 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.672 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.898 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.627 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds