Wall clock time and date at job start Mon Mar 30 2020 06:39:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37627 * 126.60965 * 2 1 4 4 C 1.39612 * 125.70265 * 359.93135 * 3 2 1 5 5 H 1.07993 * 119.99785 * 0.02562 * 4 3 2 6 6 C 1.40243 * 120.00034 * 179.72913 * 4 3 2 7 7 N 1.30688 * 120.00188 * 0.27889 * 6 4 3 8 8 Si 1.86793 * 120.00179 * 180.27964 * 6 4 3 9 9 H 1.48503 * 109.47526 * 89.99777 * 8 6 4 10 10 H 1.48497 * 109.47424 * 209.99906 * 8 6 4 11 11 H 1.48503 * 109.47062 * 329.99954 * 8 6 4 12 12 N 1.33188 * 108.60099 * 180.20187 * 3 2 1 13 13 C 1.32222 * 109.68228 * 359.61656 * 12 3 2 14 14 C 1.37488 * 126.61336 * 179.97438 * 2 1 3 15 15 C 1.47304 * 126.68903 * 0.02562 * 14 2 1 16 16 C 1.39950 * 120.17177 * 199.99813 * 15 14 2 17 17 C 1.37841 * 119.84665 * 179.71786 * 16 15 14 18 18 C 1.38447 * 120.18991 * 0.56220 * 17 16 15 19 19 C 1.38547 * 120.34237 * 359.71199 * 18 17 16 20 20 Cl 1.73597 * 119.92630 * 180.02562 * 19 18 17 21 21 C 1.37989 * 120.14602 * 0.02562 * 19 18 17 22 22 H 1.09004 * 109.46697 * 95.96316 * 1 2 3 23 23 H 1.08998 * 109.47297 * 215.96102 * 1 2 3 24 24 H 1.08996 * 109.47481 * 335.96610 * 1 2 3 25 25 H 0.96996 * 120.00436 * 180.02562 * 7 6 4 26 26 H 1.07998 * 125.84495 * 180.12516 * 13 12 3 27 27 H 1.07998 * 120.07706 * 359.97438 * 16 15 14 28 28 H 1.07999 * 119.90192 * 180.27364 * 17 16 15 29 29 H 1.08002 * 119.83069 * 179.69807 * 18 17 16 30 30 H 1.08002 * 120.09437 * 179.97438 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2857 1.1048 0.0000 4 6 1.8616 2.4349 -0.0014 5 1 0.8065 2.6651 -0.0021 6 6 2.8056 3.4720 0.0046 7 7 4.0824 3.1933 0.0058 8 14 2.2381 5.2516 0.0106 9 1 2.0850 5.7177 1.4123 10 1 3.2441 6.0944 -0.6841 11 1 0.9338 5.3576 -0.6914 12 7 3.5524 0.6930 -0.0044 13 6 3.5910 -0.6286 0.0010 14 6 2.2850 -1.1036 0.0005 15 6 1.8617 -2.5145 0.0006 16 6 2.7485 -3.5148 0.4149 17 6 2.3435 -4.8324 0.4178 18 6 1.0669 -5.1693 0.0014 19 6 0.1845 -4.1860 -0.4158 20 17 -1.4140 -4.6204 -0.9351 21 6 0.5734 -2.8620 -0.4193 22 1 -0.3633 -0.1068 -1.0222 23 1 -0.3634 -0.8318 0.6035 24 1 -0.3634 0.9385 0.4185 25 1 4.7354 3.9106 0.0103 26 1 4.4846 -1.2352 0.0011 27 1 3.7465 -3.2546 0.7354 28 1 3.0256 -5.6046 0.7415 29 1 0.7573 -6.2040 0.0014 30 1 -0.1150 -2.0962 -0.7450 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259990864.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:39 Heat of formation + Delta-G solvation = 67.658500 kcal Electronic energy + Delta-G solvation = -16562.687547 eV Core-core repulsion = 13770.302355 eV Total energy + Delta-G solvation = -2792.385192 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.15329 -38.41139 -36.19342 -33.69646 -32.75582 -31.26494 -30.28082 -28.21726 -26.20923 -24.83563 -22.34863 -22.02540 -19.92211 -19.14830 -17.00781 -16.41013 -15.64129 -15.39833 -14.77207 -14.37862 -14.28126 -13.62853 -13.11992 -12.97439 -12.79091 -12.38632 -11.95496 -11.88244 -11.58337 -11.35626 -11.15996 -11.11458 -10.94241 -10.68129 -10.52877 -10.23994 -9.50616 -8.81873 -8.46753 -8.16182 -8.07751 -6.91162 -6.66253 -4.45022 1.44535 1.60858 2.36639 2.91911 3.03891 3.06725 3.35691 3.83224 4.14133 4.25112 4.59363 5.14974 5.25428 5.38764 5.51287 5.62103 5.68758 5.76187 5.93832 6.04948 6.11299 6.21240 6.29785 6.58145 6.64958 6.73337 6.93976 7.08855 7.23555 7.41233 7.88346 7.99599 8.27701 8.68235 9.04858 9.91347 10.24585 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.035161 B = 0.004933 C = 0.004366 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 796.141162 B = 5674.427171 C = 6412.378558 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.096 3.904 2 N -0.510 5.510 3 C 0.389 3.611 4 C -0.445 4.445 5 H 0.084 0.916 6 C 0.079 3.921 7 N -0.727 5.727 8 Si 0.917 3.083 9 H -0.268 1.268 10 H -0.275 1.275 11 H -0.262 1.262 12 N -0.509 5.509 13 C 0.057 3.943 14 C -0.146 4.146 15 C 0.073 3.927 16 C -0.140 4.140 17 C -0.091 4.091 18 C -0.165 4.165 19 C -0.013 4.013 20 Cl -0.092 7.092 21 C -0.159 4.159 22 H 0.050 0.950 23 H 0.063 0.937 24 H 0.076 0.924 25 H 0.278 0.722 26 H 0.144 0.856 27 H 0.126 0.874 28 H 0.124 0.876 29 H 0.121 0.879 30 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.398 -8.695 0.242 10.237 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.049 4.049 2 N -0.201 5.201 3 C 0.152 3.848 4 C -0.483 4.483 5 H 0.102 0.898 6 C -0.147 4.147 7 N -0.350 5.350 8 Si 0.740 3.260 9 H -0.194 1.194 10 H -0.200 1.200 11 H -0.186 1.186 12 N -0.227 5.227 13 C -0.105 4.105 14 C -0.254 4.254 15 C 0.070 3.930 16 C -0.159 4.159 17 C -0.110 4.110 18 C -0.184 4.184 19 C -0.039 4.039 20 Cl -0.063 7.063 21 C -0.179 4.179 22 H 0.069 0.931 23 H 0.082 0.918 24 H 0.094 0.906 25 H 0.089 0.911 26 H 0.162 0.838 27 H 0.144 0.856 28 H 0.142 0.858 29 H 0.139 0.861 30 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -4.784 -8.103 0.183 9.412 hybrid contribution -1.181 0.113 -0.086 1.190 sum -5.965 -7.990 0.097 9.972 Atomic orbital electron populations 1.21615 0.79876 1.02591 1.00777 1.45105 1.04769 1.05995 1.64262 1.20194 0.83594 0.87482 0.93506 1.18269 0.94598 0.87071 1.48394 0.89796 1.25813 0.94387 1.01191 0.93316 1.69991 1.01239 1.34319 1.29467 0.86182 0.79574 0.80952 0.79242 1.19353 1.19974 1.18614 1.71185 1.17346 1.07840 1.26366 1.22760 0.93253 0.93268 1.01217 1.19106 0.91421 0.85220 1.29697 1.17945 0.91549 0.90795 0.92661 1.21145 1.00165 0.91966 1.02649 1.20852 0.95109 0.96143 0.98856 1.20769 0.94126 0.98187 1.05293 1.20721 0.86028 0.94503 1.02676 1.98328 1.24942 1.93480 1.89599 1.21277 0.97558 0.94172 1.04850 0.93131 0.91819 0.90556 0.91124 0.83831 0.85645 0.85846 0.86131 0.85389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.77 9.22 59.85 0.55 2.32 16 2 N -0.51 -11.88 3.24 -118.97 -0.39 -12.26 16 3 C 0.39 10.34 7.41 -155.49 -1.15 9.19 16 4 C -0.45 -11.40 8.98 -38.32 -0.34 -11.74 16 5 H 0.08 1.97 6.99 -52.49 -0.37 1.60 16 6 C 0.08 1.95 5.50 -17.29 -0.10 1.86 16 7 N -0.73 -19.09 11.87 55.56 0.66 -18.43 16 8 Si 0.92 17.95 29.56 -169.99 -5.03 12.93 16 9 H -0.27 -5.19 7.11 56.52 0.40 -4.78 16 10 H -0.27 -5.29 7.11 56.52 0.40 -4.89 16 11 H -0.26 -5.01 7.11 56.52 0.40 -4.61 16 12 N -0.51 -14.00 9.32 -12.20 -0.11 -14.11 16 13 C 0.06 1.35 11.33 -17.11 -0.19 1.16 16 14 C -0.15 -3.29 6.80 -81.37 -0.55 -3.85 16 15 C 0.07 1.39 5.86 -104.95 -0.62 0.78 16 16 C -0.14 -2.31 9.59 -39.09 -0.37 -2.68 16 17 C -0.09 -1.28 10.03 -39.65 -0.40 -1.68 16 18 C -0.16 -2.35 9.83 -39.39 -0.39 -2.74 16 19 C -0.01 -0.20 6.31 -39.56 -0.25 -0.45 16 20 Cl -0.09 -1.29 28.95 -51.86 -1.50 -2.79 16 21 C -0.16 -2.81 8.47 -39.06 -0.33 -3.14 16 22 H 0.05 0.86 7.71 -51.93 -0.40 0.46 16 23 H 0.06 1.08 6.62 -51.93 -0.34 0.73 16 24 H 0.08 1.33 7.12 -51.93 -0.37 0.96 16 25 H 0.28 6.58 8.29 -40.82 -0.34 6.24 16 26 H 0.14 2.97 7.71 -52.49 -0.40 2.57 16 27 H 0.13 1.92 7.43 -52.49 -0.39 1.53 16 28 H 0.12 1.35 8.06 -52.49 -0.42 0.93 16 29 H 0.12 1.45 8.06 -52.49 -0.42 1.03 16 30 H 0.13 2.23 5.07 -52.49 -0.27 1.97 16 LS Contribution 276.63 15.07 4.17 4.17 Total: -1.00 -28.89 276.63 -8.86 -37.75 By element: Atomic # 1 Polarization: 6.25 SS G_CDS: -2.52 Total: 3.73 kcal Atomic # 6 Polarization: -6.84 SS G_CDS: -4.14 Total: -10.98 kcal Atomic # 7 Polarization: -44.97 SS G_CDS: 0.16 Total: -44.81 kcal Atomic # 14 Polarization: 17.95 SS G_CDS: -5.03 Total: 12.93 kcal Atomic # 17 Polarization: -1.29 SS G_CDS: -1.50 Total: -2.79 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -28.89 -8.86 -37.75 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259990864.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.411 kcal (2) G-P(sol) polarization free energy of solvation -28.892 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.519 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.752 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.659 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds