Wall clock time and date at job start Mon Mar 30 2020 06:52:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 F 1.39897 * 109.46617 * 2 1 4 4 C 1.50703 * 109.46856 * 240.00193 * 2 1 3 5 5 C 1.38656 * 119.87715 * 345.02292 * 4 2 1 6 6 C 1.38615 * 120.49927 * 179.97438 * 5 4 2 7 7 C 1.37642 * 120.24642 * 359.97438 * 6 5 4 8 8 C 1.40692 * 119.74445 * 359.74993 * 7 6 5 9 9 C 1.41402 * 120.24310 * 180.27498 * 8 7 6 10 10 H 1.07996 * 119.99837 * 330.44128 * 9 8 7 11 11 C 1.39947 * 119.99878 * 150.43526 * 9 8 7 12 12 N 1.30825 * 119.99955 * 161.72664 * 11 9 8 13 13 Si 1.86805 * 120.00101 * 341.72321 * 11 9 8 14 14 H 1.48498 * 109.46722 * 95.41704 * 13 11 9 15 15 H 1.48501 * 109.47136 * 215.41810 * 13 11 9 16 16 H 1.48503 * 109.47111 * 335.41487 * 13 11 9 17 17 C 1.37597 * 119.87210 * 164.99821 * 4 2 1 18 18 C 1.53001 * 109.47051 * 120.00208 * 2 1 3 19 19 F 1.39895 * 109.46899 * 179.97438 * 18 2 1 20 20 F 1.39907 * 109.46890 * 299.99928 * 18 2 1 21 21 F 1.39896 * 109.46939 * 60.00061 * 18 2 1 22 22 H 1.09002 * 109.46917 * 179.97438 * 1 2 3 23 23 H 1.08995 * 109.47063 * 299.99847 * 1 2 3 24 24 H 1.09004 * 109.47184 * 59.99894 * 1 2 3 25 25 H 1.07993 * 119.74779 * 359.95070 * 5 4 2 26 26 H 1.07995 * 119.87170 * 180.02562 * 6 5 4 27 27 H 1.07996 * 120.12198 * 180.02562 * 7 6 5 28 28 H 0.96996 * 120.00020 * 179.97438 * 12 11 9 29 29 H 1.07999 * 120.12797 * 359.97438 * 17 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 9 1.9963 1.3190 0.0000 4 6 2.0323 -0.7104 -1.2305 5 6 1.1675 -1.4986 -1.9744 6 6 1.6156 -2.1573 -3.1087 7 6 2.9268 -2.0348 -3.5092 8 6 3.8118 -1.2330 -2.7653 9 6 5.1595 -1.0950 -3.1704 10 1 5.6486 -1.8981 -3.7016 11 6 5.8594 0.0823 -2.8831 12 7 7.1670 0.0923 -2.9234 13 14 4.9267 1.6396 -2.4422 14 1 4.8381 1.7620 -0.9650 15 1 5.6417 2.8181 -2.9946 16 1 3.5587 1.5767 -3.0167 17 6 3.3473 -0.5739 -1.6119 18 6 2.0400 -0.7213 1.2492 19 9 3.4390 -0.7218 1.2489 20 9 1.5737 -0.0618 2.3915 21 9 1.5737 -2.0403 1.2491 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3634 0.5139 -0.8900 25 1 0.1371 -1.6003 -1.6675 26 1 0.9332 -2.7683 -3.6808 27 1 3.2737 -2.5486 -4.3935 28 1 7.6521 0.9084 -2.7246 29 1 4.0190 0.0412 -1.0315 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260468439.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:52:09 Heat of formation + Delta-G solvation = -186.115155 kcal Electronic energy + Delta-G solvation = -20644.801626 eV Core-core repulsion = 16838.926115 eV Total energy + Delta-G solvation = -3805.875510 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 262.068 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -50.00234 -47.88407 -47.40468 -47.15438 -38.17701 -34.32862 -33.11339 -30.44363 -29.09900 -26.59673 -25.09019 -22.68547 -21.52672 -19.94607 -18.37837 -18.26128 -17.86905 -17.28409 -16.39547 -15.29729 -14.86431 -14.67078 -14.23922 -14.11308 -14.03808 -13.79179 -13.66345 -13.54138 -13.48172 -13.26913 -12.75712 -12.54562 -12.45783 -12.05716 -11.67188 -11.41035 -11.00714 -10.85273 -10.70339 -10.37119 -9.91920 -9.72089 -9.20725 -7.96710 -7.75688 -7.02112 -4.58195 2.12364 2.52921 2.83572 3.14270 3.18053 3.30274 3.76527 3.95333 4.08020 4.13538 4.35585 4.61977 4.85629 4.98600 5.29364 5.52326 5.73510 5.90958 5.91237 6.09394 6.40588 6.55327 6.74744 7.00146 7.17836 7.39049 7.53078 7.67719 7.95211 8.23546 8.50490 8.70207 9.99509 Molecular weight = 262.07amu Principal moments of inertia in cm(-1) A = 0.021956 B = 0.009860 C = 0.008406 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1274.967746 B = 2839.212525 C = 3330.015044 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.133 3.867 3 F -0.178 7.178 4 C -0.103 4.103 5 C -0.216 4.216 6 C -0.086 4.086 7 C -0.193 4.193 8 C 0.089 3.911 9 C -0.444 4.444 10 H 0.094 0.906 11 C 0.086 3.914 12 N -0.801 5.801 13 Si 0.900 3.100 14 H -0.263 1.263 15 H -0.287 1.287 16 H -0.243 1.243 17 C -0.200 4.200 18 C 0.437 3.563 19 F -0.166 7.166 20 F -0.183 7.183 21 F -0.168 7.168 22 H 0.092 0.908 23 H 0.075 0.925 24 H 0.093 0.907 25 H 0.105 0.895 26 H 0.101 0.899 27 H 0.104 0.896 28 H 0.287 0.713 29 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.581 0.569 5.432 11.908 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.113 3.887 3 F -0.158 7.158 4 C -0.104 4.104 5 C -0.236 4.236 6 C -0.104 4.104 7 C -0.212 4.212 8 C 0.086 3.914 9 C -0.472 4.472 10 H 0.112 0.888 11 C -0.134 4.134 12 N -0.425 5.425 13 Si 0.726 3.274 14 H -0.189 1.189 15 H -0.214 1.214 16 H -0.166 1.166 17 C -0.219 4.219 18 C 0.383 3.617 19 F -0.147 7.147 20 F -0.164 7.164 21 F -0.149 7.149 22 H 0.111 0.889 23 H 0.094 0.906 24 H 0.111 0.889 25 H 0.123 0.877 26 H 0.119 0.881 27 H 0.123 0.877 28 H 0.097 0.903 29 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -10.255 0.686 5.461 11.639 hybrid contribution 0.063 0.744 0.501 0.900 sum -10.192 1.430 5.963 11.894 Atomic orbital electron populations 1.22452 0.90263 1.05279 1.04878 1.20685 0.96867 0.79010 0.92121 1.92950 1.90297 1.35398 1.97121 1.19140 0.95489 1.00990 0.94746 1.20233 0.98085 1.05644 0.99604 1.20617 0.95637 0.98300 0.95884 1.21153 0.93081 1.06156 1.00850 1.17674 0.93181 0.90748 0.89809 1.19495 0.93835 1.02161 1.31713 0.88820 1.26156 0.94682 1.01379 0.91177 1.69682 1.07967 1.30266 1.34564 0.86472 0.81531 0.79387 0.80042 1.18889 1.21449 1.16562 1.20943 0.94340 1.07122 0.99525 1.20965 0.76739 0.78522 0.85519 1.93248 1.28646 1.96261 1.96576 1.93166 1.88511 1.80807 1.53964 1.93183 1.88392 1.36710 1.96634 0.88924 0.90645 0.88851 0.87735 0.88093 0.87737 0.90258 0.87413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.33 7.49 37.16 0.28 -2.05 15 2 C 0.13 2.43 0.99 -91.77 -0.09 2.34 15 3 F -0.18 -3.53 16.40 2.25 0.04 -3.50 15 4 C -0.10 -2.17 4.65 -104.70 -0.49 -2.66 15 5 C -0.22 -4.15 9.10 -39.29 -0.36 -4.50 15 6 C -0.09 -1.69 10.02 -39.66 -0.40 -2.09 15 7 C -0.19 -4.30 9.80 -38.87 -0.38 -4.68 15 8 C 0.09 2.22 5.10 -106.83 -0.55 1.68 15 9 C -0.44 -11.89 9.57 -37.74 -0.36 -12.25 15 10 H 0.09 2.59 8.06 -52.49 -0.42 2.17 15 11 C 0.09 2.27 5.40 -17.34 -0.09 2.17 15 12 N -0.80 -21.37 13.93 55.55 0.77 -20.59 15 13 Si 0.90 21.28 24.52 -169.99 -4.17 17.11 15 14 H -0.26 -6.24 6.71 56.52 0.38 -5.86 15 15 H -0.29 -6.48 7.11 56.52 0.40 -6.07 15 16 H -0.24 -5.83 6.87 56.52 0.39 -5.44 15 17 C -0.20 -4.85 5.70 -38.87 -0.22 -5.07 15 18 C 0.44 7.89 2.43 37.16 0.09 7.98 15 19 F -0.17 -3.41 15.80 2.25 0.04 -3.37 15 20 F -0.18 -2.99 16.78 2.25 0.04 -2.95 15 21 F -0.17 -2.89 16.51 2.25 0.04 -2.86 15 22 H 0.09 1.13 6.50 -51.93 -0.34 0.79 15 23 H 0.07 0.88 7.80 -51.93 -0.41 0.47 15 24 H 0.09 1.19 8.11 -51.93 -0.42 0.77 15 25 H 0.10 1.65 5.93 -52.49 -0.31 1.34 15 26 H 0.10 1.64 8.06 -52.49 -0.42 1.22 15 27 H 0.10 2.17 8.06 -52.49 -0.42 1.75 15 28 H 0.29 6.95 8.30 -40.82 -0.34 6.61 15 29 H 0.11 2.73 4.19 -52.49 -0.22 2.51 15 LS Contribution 259.85 15.07 3.92 3.92 Total: -1.00 -27.09 259.85 -4.03 -31.12 By element: Atomic # 1 Polarization: 2.38 SS G_CDS: -2.13 Total: 0.25 kcal Atomic # 6 Polarization: -16.56 SS G_CDS: -2.57 Total: -19.13 kcal Atomic # 7 Polarization: -21.37 SS G_CDS: 0.77 Total: -20.59 kcal Atomic # 9 Polarization: -12.82 SS G_CDS: 0.15 Total: -12.67 kcal Atomic # 14 Polarization: 21.28 SS G_CDS: -4.17 Total: 17.11 kcal Total LS contribution 3.92 Total: 3.92 kcal Total: -27.09 -4.03 -31.12 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260468439.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -154.993 kcal (2) G-P(sol) polarization free energy of solvation -27.092 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.085 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.122 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.115 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds