Wall clock time and date at job start Mon Mar 30 2020 06:39:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.35444 * 124.17661 * 2 1 4 4 C 1.36498 * 107.43126 * 179.67986 * 3 2 1 5 5 C 1.48188 * 127.74102 * 180.26447 * 4 3 2 6 6 C 1.39482 * 120.12805 * 129.91392 * 5 4 3 7 7 C 1.37965 * 119.89302 * 179.76557 * 6 5 4 8 8 C 1.38352 * 120.14504 * 0.51371 * 7 6 5 9 9 C 1.38451 * 120.25655 * 359.73795 * 8 7 6 10 10 Cl 1.73596 * 119.95160 * 180.02562 * 9 8 7 11 11 C 1.38124 * 120.10084 * 0.02562 * 9 8 7 12 12 C 1.47478 * 104.52004 * 0.41580 * 4 3 2 13 13 C 1.41112 * 127.03663 * 179.83708 * 12 4 3 14 14 H 1.08002 * 120.00371 * 359.72236 * 13 12 4 15 15 C 1.39956 * 119.99878 * 179.43622 * 13 12 4 16 16 N 1.30854 * 119.99737 * 0.28260 * 15 13 12 17 17 Si 1.86794 * 119.99846 * 180.27714 * 15 13 12 18 18 H 1.48504 * 109.47196 * 60.00578 * 17 15 13 19 19 H 1.48504 * 109.46887 * 180.02562 * 17 15 13 20 20 H 1.48493 * 109.47446 * 300.00593 * 17 15 13 21 21 N 1.28241 * 124.17915 * 179.97438 * 2 1 3 22 22 H 1.08994 * 109.47071 * 270.01377 * 1 2 3 23 23 H 1.09001 * 109.47011 * 30.01220 * 1 2 3 24 24 H 1.09000 * 109.47325 * 150.01274 * 1 2 3 25 25 H 1.08005 * 126.28548 * 359.97438 * 3 2 1 26 26 H 1.08001 * 120.05598 * 359.97438 * 6 5 4 27 27 H 1.07999 * 119.93015 * 180.22952 * 7 6 5 28 28 H 1.08004 * 119.87390 * 179.72635 * 8 7 6 29 29 H 1.07996 * 120.06989 * 179.97438 * 11 9 8 30 30 H 0.97000 * 119.99191 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2259 1.1205 0.0000 4 6 3.5329 0.7273 0.0073 5 6 4.7391 1.5881 0.0156 6 6 5.7531 1.3635 0.9466 7 6 6.8762 2.1649 0.9469 8 6 6.9936 3.1968 0.0328 9 6 5.9885 3.4284 -0.8907 10 17 6.1443 4.7250 -2.0345 11 6 4.8618 2.6295 -0.9034 12 6 3.4757 -0.7464 0.0013 13 6 4.5683 -1.6394 0.0020 14 1 5.5784 -1.2570 0.0029 15 6 4.3431 -3.0207 0.0076 16 7 3.1193 -3.4840 0.0066 17 14 5.7894 -4.2028 0.0164 18 1 6.6127 -3.9687 1.2300 19 1 5.2866 -5.6001 0.0208 20 1 6.6187 -3.9794 -1.1949 21 7 2.1854 -1.0609 0.0005 22 1 -0.3633 0.0002 1.0276 23 1 -0.3633 0.8899 -0.5140 24 1 -0.3634 -0.8901 -0.5136 25 1 1.8647 2.1384 -0.0004 26 1 5.6608 0.5616 1.6641 27 1 7.6634 1.9892 1.6651 28 1 7.8727 3.8242 0.0398 29 1 4.0779 2.8109 -1.6237 30 1 2.9633 -4.4414 0.0102 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260663830.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:09 Heat of formation + Delta-G solvation = 84.994581 kcal Electronic energy + Delta-G solvation = -16561.519988 eV Core-core repulsion = 13769.886544 eV Total energy + Delta-G solvation = -2791.633443 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.33075 -38.46470 -36.10740 -33.63268 -32.15720 -30.67072 -30.13126 -28.11730 -27.19110 -24.24098 -22.24770 -21.97637 -19.59707 -19.18678 -16.88892 -16.34936 -15.55999 -14.81424 -14.75927 -14.58765 -14.44880 -13.35148 -13.13031 -13.07249 -12.68359 -12.28070 -11.98322 -11.81794 -11.17645 -11.12567 -11.08030 -10.96193 -10.79603 -10.46144 -10.40390 -9.96946 -9.23578 -8.80073 -8.33343 -8.22002 -7.52698 -7.09432 -6.36774 -4.19403 1.67956 1.76698 2.46330 3.14662 3.20726 3.24048 3.38455 4.02870 4.15803 4.18124 4.39583 5.29919 5.34627 5.43855 5.58264 5.77120 5.82143 5.84628 5.88127 5.92617 5.99343 6.25523 6.48807 6.68535 6.88355 6.92123 7.03118 7.31221 7.40535 7.41762 7.68637 8.27143 8.61688 8.92549 9.19746 10.25173 10.60616 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.017298 B = 0.006746 C = 0.005232 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1618.327457 B = 4149.712875 C = 5350.427449 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.108 3.892 2 N -0.327 5.327 3 C -0.014 4.014 4 C -0.260 4.260 5 C 0.069 3.931 6 C -0.108 4.108 7 C -0.108 4.108 8 C -0.142 4.142 9 C -0.030 4.030 10 Cl -0.094 7.094 11 C -0.123 4.123 12 C 0.219 3.781 13 C -0.439 4.439 14 H 0.081 0.919 15 C 0.073 3.927 16 N -0.775 5.775 17 Si 0.904 3.096 18 H -0.268 1.268 19 H -0.282 1.282 20 H -0.268 1.268 21 N -0.340 5.340 22 H 0.059 0.941 23 H 0.069 0.931 24 H 0.080 0.920 25 H 0.145 0.855 26 H 0.131 0.869 27 H 0.124 0.876 28 H 0.121 0.879 29 H 0.124 0.876 30 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.676 9.782 0.354 9.931 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.035 4.035 2 N -0.108 5.108 3 C -0.161 4.161 4 C -0.273 4.273 5 C 0.067 3.933 6 C -0.126 4.126 7 C -0.126 4.126 8 C -0.161 4.161 9 C -0.056 4.056 10 Cl -0.066 7.066 11 C -0.142 4.142 12 C 0.070 3.930 13 C -0.477 4.477 14 H 0.099 0.901 15 C -0.146 4.146 16 N -0.402 5.402 17 Si 0.729 3.271 18 H -0.193 1.193 19 H -0.207 1.207 20 H -0.193 1.193 21 N -0.172 5.172 22 H 0.077 0.923 23 H 0.088 0.912 24 H 0.099 0.901 25 H 0.162 0.838 26 H 0.149 0.851 27 H 0.142 0.858 28 H 0.139 0.861 29 H 0.142 0.858 30 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 0.546 8.781 0.249 8.802 hybrid contribution 1.084 0.283 -0.166 1.133 sum 1.630 9.064 0.083 9.210 Atomic orbital electron populations 1.21566 0.77111 1.02935 1.01909 1.45160 1.06026 1.03599 1.55984 1.22276 0.91523 0.92101 1.10228 1.19871 0.90130 0.94308 1.23006 1.17986 0.92755 0.91001 0.91579 1.21473 0.93178 0.99240 0.98714 1.20965 0.98017 0.95096 0.98522 1.20820 0.98507 1.00087 0.96704 1.20740 0.97489 0.92842 0.94570 1.98321 1.97940 1.49672 1.60622 1.21126 0.96900 0.96090 1.00089 1.20339 0.90381 0.87383 0.94903 1.18466 0.91966 0.89327 1.47981 0.90059 1.25786 0.96153 0.98999 0.93693 1.69946 1.20362 1.14149 1.35760 0.86454 0.81992 0.79057 0.79594 1.19252 1.20698 1.19277 1.74623 1.03185 1.06914 1.32473 0.92287 0.91242 0.90075 0.83765 0.85063 0.85832 0.86085 0.85756 0.91945 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 1.75 11.25 59.85 0.67 2.42 16 2 N -0.33 -7.35 3.69 -67.72 -0.25 -7.59 16 3 C -0.01 -0.30 11.36 -16.59 -0.19 -0.49 16 4 C -0.26 -6.05 5.86 -102.67 -0.60 -6.65 16 5 C 0.07 1.39 5.75 -104.90 -0.60 0.79 16 6 C -0.11 -2.01 9.16 -39.22 -0.36 -2.37 16 7 C -0.11 -1.68 10.03 -39.64 -0.40 -2.07 16 8 C -0.14 -2.15 9.82 -39.46 -0.39 -2.53 16 9 C -0.03 -0.49 6.31 -39.54 -0.25 -0.74 16 10 Cl -0.09 -1.35 28.95 -51.86 -1.50 -2.85 16 11 C -0.12 -2.22 9.52 -39.18 -0.37 -2.60 16 12 C 0.22 5.98 6.97 -82.59 -0.58 5.40 16 13 C -0.44 -12.01 9.22 -37.85 -0.35 -12.36 16 14 H 0.08 2.11 7.37 -52.49 -0.39 1.73 16 15 C 0.07 1.94 5.50 -17.32 -0.10 1.84 16 16 N -0.77 -21.58 12.00 55.55 0.67 -20.92 16 17 Si 0.90 19.70 29.56 -169.99 -5.02 14.67 16 18 H -0.27 -5.69 7.11 56.52 0.40 -5.29 16 19 H -0.28 -6.02 7.11 56.52 0.40 -5.62 16 20 H -0.27 -5.79 7.11 56.52 0.40 -5.39 16 21 N -0.34 -9.26 10.21 33.44 0.34 -8.92 16 22 H 0.06 0.87 8.14 -51.93 -0.42 0.44 16 23 H 0.07 0.88 8.12 -51.93 -0.42 0.46 16 24 H 0.08 1.33 8.14 -51.93 -0.42 0.91 16 25 H 0.14 2.46 8.06 -52.48 -0.42 2.04 16 26 H 0.13 2.53 8.06 -52.49 -0.42 2.11 16 27 H 0.12 1.56 8.06 -52.49 -0.42 1.14 16 28 H 0.12 1.53 8.06 -52.48 -0.42 1.11 16 29 H 0.12 2.16 8.06 -52.49 -0.42 1.74 16 30 H 0.27 6.94 8.30 -40.82 -0.34 6.60 16 LS Contribution 286.85 15.07 4.32 4.32 Total: -1.00 -30.80 286.85 -7.85 -38.66 By element: Atomic # 1 Polarization: 4.88 SS G_CDS: -2.90 Total: 1.98 kcal Atomic # 6 Polarization: -15.84 SS G_CDS: -3.51 Total: -19.35 kcal Atomic # 7 Polarization: -38.19 SS G_CDS: 0.76 Total: -37.43 kcal Atomic # 14 Polarization: 19.70 SS G_CDS: -5.02 Total: 14.67 kcal Atomic # 17 Polarization: -1.35 SS G_CDS: -1.50 Total: -2.85 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -30.80 -7.85 -38.66 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260663830.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.650 kcal (2) G-P(sol) polarization free energy of solvation -30.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.848 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.656 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds