Wall clock time and date at job start Mon Mar 30 2020 06:35:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38137 * 120.03592 * 2 1 4 4 C 1.38268 * 120.06944 * 180.02562 * 3 2 1 5 5 C 1.38311 * 120.14056 * 359.97438 * 4 3 2 6 6 C 1.38091 * 120.06869 * 359.97438 * 5 4 3 7 7 C 1.38855 * 120.03645 * 179.72296 * 2 1 3 8 8 N 1.40074 * 120.06698 * 359.97438 * 7 2 1 9 9 N 1.39874 * 125.69057 * 48.32387 * 8 7 2 10 10 C 1.30309 * 109.30860 * 179.97438 * 9 8 7 11 11 C 1.41962 * 108.10975 * 0.02562 * 10 9 8 12 12 C 1.41465 * 126.56852 * 180.02562 * 11 10 9 13 13 H 1.08002 * 119.99478 * 179.97438 * 12 11 10 14 14 C 1.39685 * 120.00107 * 359.97438 * 12 11 10 15 15 N 1.31050 * 120.00239 * 359.97438 * 14 12 11 16 16 Si 1.86803 * 119.99861 * 179.97438 * 14 12 11 17 17 H 1.48501 * 109.47278 * 89.99842 * 16 14 12 18 18 H 1.48506 * 109.46937 * 209.99587 * 16 14 12 19 19 H 1.48500 * 109.47019 * 329.99407 * 16 14 12 20 20 C 1.34835 * 125.68949 * 228.01450 * 8 7 2 21 21 Cl 1.73600 * 126.44874 * 0.02562 * 20 8 7 22 22 H 1.09005 * 109.46590 * 85.63933 * 1 2 3 23 23 H 1.08999 * 109.47097 * 325.64243 * 1 2 3 24 24 H 1.08996 * 109.47288 * 205.63398 * 1 2 3 25 25 H 1.07997 * 119.96048 * 0.02562 * 3 2 1 26 26 H 1.07999 * 119.92622 * 180.02562 * 4 3 2 27 27 H 1.07998 * 119.96138 * 180.02562 * 5 4 3 28 28 H 1.07999 * 120.03199 * 179.97438 * 6 5 4 29 29 H 1.07999 * 125.93942 * 179.97438 * 10 9 8 30 30 H 0.96997 * 120.00023 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1984 1.1959 0.0000 4 6 3.5811 1.1967 -0.0005 5 6 4.2763 0.0010 -0.0005 6 6 3.5909 -1.1978 0.0005 7 6 2.2020 -1.2021 0.0058 8 7 1.5038 -2.4164 0.0122 9 7 0.4419 -2.7516 -0.8342 10 6 0.0311 -3.9560 -0.5538 11 6 0.8280 -4.4580 0.5084 12 6 0.7160 -5.7297 1.1179 13 1 1.3822 -6.0032 1.9228 14 6 -0.2562 -6.6315 0.6788 15 7 -1.0649 -6.2993 -0.2974 16 14 -0.4036 -8.3110 1.4833 17 1 -1.3490 -8.2314 2.6257 18 1 -0.9088 -9.2928 0.4902 19 1 0.9297 -8.7438 1.9732 20 6 1.7471 -3.4593 0.8314 21 17 2.9708 -3.5422 2.0600 22 1 -0.3633 0.0781 -1.0248 23 1 -0.3633 0.8484 0.5800 24 1 -0.3633 -0.9265 0.4446 25 1 1.6584 2.1311 0.0004 26 1 4.1193 2.1330 -0.0001 27 1 5.3562 0.0050 -0.0005 28 1 4.1343 -2.1311 0.0001 29 1 -0.7758 -4.4807 -1.0437 30 1 -1.7402 -6.9254 -0.6021 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260923671.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:35:53 Heat of formation + Delta-G solvation = 87.717703 kcal Electronic energy + Delta-G solvation = -16852.388091 eV Core-core repulsion = 14060.872731 eV Total energy + Delta-G solvation = -2791.515360 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.08596 -38.39998 -35.44159 -33.97175 -32.52816 -31.96665 -29.13398 -28.58190 -26.37176 -25.05171 -22.35061 -21.36726 -19.71121 -19.51062 -17.71950 -16.22163 -15.39336 -15.20716 -15.03510 -14.20867 -13.68027 -13.24572 -12.97121 -12.91065 -12.84675 -12.14751 -11.95361 -11.66889 -11.35206 -11.28588 -10.99417 -10.96775 -10.87765 -10.61738 -10.41903 -9.90358 -9.56538 -9.18870 -8.82974 -8.44323 -7.71697 -7.33732 -6.72404 -4.24296 1.50885 1.65633 2.85145 2.95455 3.10076 3.14785 3.17987 3.91749 3.96109 4.07780 4.12195 5.13390 5.17083 5.29842 5.31902 5.55322 5.75697 5.89621 6.04574 6.12828 6.21670 6.34672 6.58425 6.73434 6.75399 6.87946 6.95131 7.09922 7.17542 7.32350 7.81228 8.28278 8.39507 8.64880 8.87599 9.08782 10.25866 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.033289 B = 0.006225 C = 0.005496 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 840.913429 B = 4496.776164 C = 5093.434314 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.104 4.104 2 C -0.090 4.090 3 C -0.110 4.110 4 C -0.139 4.139 5 C -0.111 4.111 6 C -0.127 4.127 7 C 0.188 3.812 8 N -0.343 5.343 9 N -0.301 5.301 10 C 0.049 3.951 11 C 0.022 3.978 12 C -0.421 4.421 13 H 0.080 0.920 14 C 0.070 3.930 15 N -0.829 5.829 16 Si 0.922 3.078 17 H -0.270 1.270 18 H -0.278 1.278 19 H -0.263 1.263 20 C -0.065 4.065 21 Cl -0.057 7.057 22 H 0.070 0.930 23 H 0.055 0.945 24 H 0.073 0.927 25 H 0.121 0.879 26 H 0.119 0.881 27 H 0.121 0.879 28 H 0.125 0.875 29 H 0.214 0.786 30 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.218 7.933 0.726 9.015 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.093 4.093 3 C -0.128 4.128 4 C -0.158 4.158 5 C -0.130 4.130 6 C -0.148 4.148 7 C 0.093 3.907 8 N -0.128 5.128 9 N -0.120 5.120 10 C -0.140 4.140 11 C 0.012 3.988 12 C -0.454 4.454 13 H 0.098 0.902 14 C -0.143 4.143 15 N -0.459 5.459 16 Si 0.747 3.253 17 H -0.196 1.196 18 H -0.203 1.203 19 H -0.187 1.187 20 C -0.208 4.208 21 Cl -0.029 7.029 22 H 0.089 0.911 23 H 0.074 0.926 24 H 0.092 0.908 25 H 0.139 0.861 26 H 0.137 0.863 27 H 0.139 0.861 28 H 0.143 0.857 29 H 0.230 0.770 30 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 3.988 8.790 0.020 9.653 hybrid contribution 0.287 -1.485 0.994 1.810 sum 4.275 7.305 1.015 8.525 Atomic orbital electron populations 1.20673 0.90592 1.02555 1.02205 1.19876 0.96770 0.91602 1.01030 1.20823 0.94105 0.96732 1.01175 1.20998 0.94149 0.97734 1.02929 1.20868 0.99458 0.91816 1.00833 1.21141 0.92609 0.98971 1.02110 1.17255 0.89927 0.83631 0.99848 1.44634 1.28604 1.09964 1.29555 1.76901 1.01890 1.18254 1.14913 1.25278 1.00695 0.90547 0.97487 1.17832 0.92381 0.93267 0.95361 1.18879 1.14218 0.96282 1.16034 0.90191 1.25772 0.94074 1.00492 0.94013 1.69404 1.16433 1.36545 1.23500 0.86071 0.79462 0.80477 0.79273 1.19576 1.20309 1.18732 1.21118 1.04377 0.93677 1.01610 1.98215 1.53981 1.97976 1.52770 0.91118 0.92584 0.90820 0.86074 0.86343 0.86058 0.85715 0.76998 0.90860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.79 9.16 36.00 0.33 -1.46 16 2 C -0.09 -1.63 5.90 -104.43 -0.62 -2.24 16 3 C -0.11 -1.62 9.71 -39.61 -0.38 -2.00 16 4 C -0.14 -1.89 10.04 -39.54 -0.40 -2.28 16 5 C -0.11 -1.63 10.04 -39.61 -0.40 -2.03 16 6 C -0.13 -2.31 8.85 -39.39 -0.35 -2.66 16 7 C 0.19 3.84 6.08 -83.62 -0.51 3.33 16 8 N -0.34 -8.06 3.04 -7.03 -0.02 -8.08 16 9 N -0.30 -7.34 10.60 30.98 0.33 -7.01 16 10 C 0.05 1.26 10.91 -16.77 -0.18 1.07 16 11 C 0.02 0.57 5.94 -106.77 -0.63 -0.06 16 12 C -0.42 -10.94 9.24 -37.81 -0.35 -11.29 16 13 H 0.08 2.04 7.78 -52.49 -0.41 1.63 16 14 C 0.07 1.70 5.49 -17.34 -0.10 1.60 16 15 N -0.83 -20.29 10.32 55.54 0.57 -19.71 16 16 Si 0.92 18.59 29.56 -169.99 -5.02 13.57 16 17 H -0.27 -5.41 7.11 56.52 0.40 -5.01 16 18 H -0.28 -5.47 7.11 56.52 0.40 -5.07 16 19 H -0.26 -5.31 7.11 56.52 0.40 -4.90 16 20 C -0.07 -1.61 7.37 -15.76 -0.12 -1.72 16 21 Cl -0.06 -1.21 27.42 -51.86 -1.42 -2.64 16 22 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 23 H 0.06 0.80 8.11 -51.93 -0.42 0.38 16 24 H 0.07 1.50 6.56 -51.93 -0.34 1.16 16 25 H 0.12 1.44 8.06 -52.49 -0.42 1.02 16 26 H 0.12 1.23 8.06 -52.49 -0.42 0.81 16 27 H 0.12 1.43 8.06 -52.49 -0.42 1.00 16 28 H 0.12 2.32 7.44 -52.49 -0.39 1.93 16 29 H 0.21 5.37 5.77 -52.49 -0.30 5.07 16 30 H 0.28 6.28 8.30 -40.82 -0.34 5.94 16 LS Contribution 277.29 15.07 4.18 4.18 Total: -1.00 -26.96 277.29 -7.78 -34.74 By element: Atomic # 1 Polarization: 7.39 SS G_CDS: -2.69 Total: 4.70 kcal Atomic # 6 Polarization: -16.04 SS G_CDS: -3.70 Total: -19.74 kcal Atomic # 7 Polarization: -35.69 SS G_CDS: 0.88 Total: -34.81 kcal Atomic # 14 Polarization: 18.59 SS G_CDS: -5.02 Total: 13.57 kcal Atomic # 17 Polarization: -1.21 SS G_CDS: -1.42 Total: -2.64 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -26.96 -7.78 -34.74 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260923671.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 122.458 kcal (2) G-P(sol) polarization free energy of solvation -26.963 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 95.495 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.778 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.741 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.718 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds