Wall clock time and date at job start Mon Mar 30 2020 06:39:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 N 1.39930 * 126.03499 * 2 1 4 4 C 1.30792 * 109.58100 * 179.97438 * 3 2 1 5 5 C 1.40150 * 108.96806 * 0.02562 * 4 3 2 6 6 C 1.47742 * 126.47268 * 180.02562 * 5 4 3 7 7 C 1.39773 * 120.14778 * 129.69627 * 6 5 4 8 8 C 1.37881 * 119.86477 * 179.76615 * 7 6 5 9 9 C 1.38424 * 120.16823 * 0.51081 * 8 7 6 10 10 C 1.38516 * 120.31003 * 359.74526 * 9 8 7 11 11 Cl 1.73591 * 119.93750 * 180.02562 * 10 9 8 12 12 C 1.38030 * 120.12544 * 359.97438 * 10 9 8 13 13 C 1.37496 * 126.03308 * 179.68592 * 2 1 3 14 14 C 1.39614 * 126.76936 * 0.02562 * 13 2 1 15 15 H 1.08004 * 120.00093 * 308.47097 * 14 13 2 16 16 C 1.40319 * 120.00220 * 128.47057 * 14 13 2 17 17 N 1.30685 * 120.00269 * 162.66868 * 16 14 13 18 18 Si 1.86806 * 119.99851 * 342.66161 * 16 14 13 19 19 H 1.48500 * 109.46957 * 95.59855 * 18 16 14 20 20 H 1.48495 * 109.47025 * 215.60074 * 18 16 14 21 21 H 1.48502 * 109.47146 * 335.60454 * 18 16 14 22 22 H 1.08998 * 109.46893 * 95.87221 * 1 2 3 23 23 H 1.09002 * 109.47180 * 215.86857 * 1 2 3 24 24 H 1.09001 * 109.46903 * 335.87110 * 1 2 3 25 25 H 1.08001 * 125.51881 * 179.97438 * 4 3 2 26 26 H 1.07996 * 120.06528 * 0.02646 * 7 6 5 27 27 H 1.07997 * 119.91650 * 180.25358 * 8 7 6 28 28 H 1.08007 * 119.84050 * 179.71628 * 9 8 7 29 29 H 1.08002 * 120.08788 * 179.97438 * 12 10 9 30 30 H 0.96999 * 120.00146 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2882 1.1316 0.0000 4 6 3.5425 0.7611 0.0006 5 6 3.6040 -0.6391 0.0003 6 6 4.8294 -1.4643 0.0013 7 6 4.9796 -2.4970 0.9313 8 6 6.1236 -3.2667 0.9239 9 6 7.1272 -3.0123 0.0051 10 6 6.9882 -1.9873 -0.9162 11 17 8.2526 -1.6772 -2.0645 12 6 5.8457 -1.2128 -0.9237 13 6 2.2738 -1.1119 0.0061 14 6 1.8610 -2.4456 0.0129 15 1 1.1452 -2.7856 0.7467 16 6 2.3761 -3.3443 -0.9336 17 7 2.2702 -4.6320 -0.7373 18 14 3.2130 -2.7001 -2.4745 19 1 4.6816 -2.6567 -2.2587 20 1 2.9067 -3.5985 -3.6165 21 1 2.7160 -1.3329 -2.7729 22 1 -0.3633 -0.1051 -1.0223 23 1 -0.3634 -0.8328 0.6021 24 1 -0.3633 0.9379 0.4201 25 1 4.3933 1.4264 0.0003 26 1 4.1993 -2.6942 1.6514 27 1 6.2387 -4.0674 1.6394 28 1 8.0231 -3.6156 0.0070 29 1 5.7381 -0.4135 -1.6420 30 1 2.6266 -5.2533 -1.3915 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260929025.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:06 Heat of formation + Delta-G solvation = 80.648325 kcal Electronic energy + Delta-G solvation = -17235.929809 eV Core-core repulsion = 14444.107898 eV Total energy + Delta-G solvation = -2791.821911 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.67044 -38.21063 -35.98792 -33.61171 -32.43004 -30.99036 -30.12954 -28.92561 -25.61214 -25.03637 -22.10135 -21.76565 -19.48633 -19.36757 -17.38046 -16.25383 -15.51196 -14.90645 -14.74253 -14.14935 -14.01522 -13.32747 -13.22681 -13.05293 -12.84338 -12.56377 -11.94075 -11.72269 -11.53586 -11.31328 -11.06522 -10.82592 -10.61080 -10.54530 -10.39960 -10.12541 -9.56193 -9.21274 -8.27656 -8.08972 -8.05958 -6.94906 -6.84732 -4.74554 1.83514 1.91534 2.58071 2.90821 3.25180 3.28298 3.34967 3.70618 3.78681 4.06458 4.44337 4.85977 5.40738 5.46601 5.54549 5.88156 5.96422 6.00552 6.03203 6.08305 6.14510 6.37958 6.60820 6.70573 6.82374 6.94253 7.05675 7.15506 7.44586 7.52818 7.69650 7.91755 8.19823 8.50619 8.78489 9.02718 10.12161 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.020824 B = 0.008834 C = 0.007714 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1344.251613 B = 3168.986740 C = 3629.010631 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.124 3.876 2 N -0.416 5.416 3 N -0.363 5.363 4 C 0.076 3.924 5 C -0.328 4.328 6 C 0.065 3.935 7 C -0.091 4.091 8 C -0.110 4.110 9 C -0.140 4.140 10 C -0.034 4.034 11 Cl -0.098 7.098 12 C -0.119 4.119 13 C 0.290 3.710 14 C -0.489 4.489 15 H 0.097 0.903 16 C 0.123 3.877 17 N -0.809 5.809 18 Si 0.865 3.135 19 H -0.232 1.232 20 H -0.288 1.288 21 H -0.257 1.257 22 H 0.057 0.943 23 H 0.076 0.924 24 H 0.067 0.933 25 H 0.158 0.842 26 H 0.131 0.869 27 H 0.122 0.878 28 H 0.119 0.881 29 H 0.121 0.879 30 H 0.285 0.715 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.234 2.030 0.161 5.616 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.019 4.019 2 N -0.202 5.202 3 N -0.182 5.182 4 C -0.110 4.110 5 C -0.340 4.340 6 C 0.063 3.937 7 C -0.110 4.110 8 C -0.128 4.128 9 C -0.159 4.159 10 C -0.060 4.060 11 Cl -0.070 7.070 12 C -0.139 4.139 13 C 0.168 3.832 14 C -0.524 4.524 15 H 0.115 0.885 16 C -0.099 4.099 17 N -0.435 5.435 18 Si 0.689 3.311 19 H -0.155 1.155 20 H -0.215 1.215 21 H -0.181 1.181 22 H 0.075 0.925 23 H 0.095 0.905 24 H 0.086 0.914 25 H 0.176 0.824 26 H 0.149 0.851 27 H 0.140 0.860 28 H 0.137 0.863 29 H 0.139 0.861 30 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 4.405 2.878 0.016 5.262 hybrid contribution 0.878 -0.592 -0.930 1.409 sum 5.283 2.286 -0.914 5.828 Atomic orbital electron populations 1.21352 0.76547 1.02199 1.01771 1.49233 1.05068 1.03928 1.61938 1.76671 1.01484 1.09831 1.30198 1.23165 0.94407 0.94110 0.99293 1.18756 0.91328 0.91966 1.31932 1.17921 0.90885 0.93209 0.91662 1.21461 0.96583 0.94613 0.98326 1.20936 0.93704 0.99529 0.98625 1.20819 1.00221 0.98171 0.96720 1.20651 0.90872 0.99824 0.94675 1.98308 1.52537 1.95561 1.60546 1.21075 0.92726 1.00421 0.99632 1.18830 0.87545 0.87861 0.88994 1.18065 1.28203 0.88783 1.17392 0.88532 1.25543 0.91997 0.93851 0.98465 1.69542 1.36556 1.02766 1.34683 0.87008 0.83330 0.80057 0.80686 1.15543 1.21456 1.18085 0.92492 0.90540 0.91391 0.82448 0.85143 0.86007 0.86257 0.86088 0.90474 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.12 2.22 11.23 59.85 0.67 2.89 16 2 N -0.42 -9.44 4.08 -65.15 -0.27 -9.71 16 3 N -0.36 -8.23 12.48 30.68 0.38 -7.85 16 4 C 0.08 1.63 11.85 -17.28 -0.20 1.42 16 5 C -0.33 -7.45 4.53 -104.18 -0.47 -7.92 16 6 C 0.06 1.37 3.34 -104.89 -0.35 1.02 16 7 C -0.09 -1.84 8.88 -39.14 -0.35 -2.19 16 8 C -0.11 -1.92 10.03 -39.64 -0.40 -2.32 16 9 C -0.14 -2.39 9.83 -39.41 -0.39 -2.77 16 10 C -0.03 -0.61 6.23 -39.56 -0.25 -0.86 16 11 Cl -0.10 -1.56 28.95 -51.86 -1.50 -3.06 16 12 C -0.12 -2.35 7.01 -39.11 -0.27 -2.62 16 13 C 0.29 6.96 5.35 -83.70 -0.45 6.51 16 14 C -0.49 -12.22 8.62 -38.29 -0.33 -12.55 16 15 H 0.10 2.52 8.06 -52.48 -0.42 2.10 16 16 C 0.12 3.06 4.88 -17.26 -0.08 2.98 16 17 N -0.81 -20.58 13.92 55.57 0.77 -19.80 16 18 Si 0.87 20.26 24.76 -169.99 -4.21 16.05 16 19 H -0.23 -5.29 4.75 56.52 0.27 -5.02 16 20 H -0.29 -6.67 7.11 56.52 0.40 -6.27 16 21 H -0.26 -6.40 7.11 56.52 0.40 -6.00 16 22 H 0.06 0.96 8.14 -51.93 -0.42 0.54 16 23 H 0.08 1.29 7.98 -51.93 -0.41 0.88 16 24 H 0.07 1.06 8.14 -51.93 -0.42 0.64 16 25 H 0.16 2.85 8.06 -52.49 -0.42 2.43 16 26 H 0.13 2.74 7.94 -52.49 -0.42 2.32 16 27 H 0.12 1.81 8.06 -52.49 -0.42 1.39 16 28 H 0.12 1.73 8.06 -52.48 -0.42 1.30 16 29 H 0.12 2.31 8.06 -52.49 -0.42 1.89 16 30 H 0.28 6.76 8.29 -40.82 -0.34 6.42 16 LS Contribution 275.73 15.07 4.16 4.16 Total: -1.00 -27.43 275.73 -6.59 -34.03 By element: Atomic # 1 Polarization: 5.67 SS G_CDS: -3.06 Total: 2.61 kcal Atomic # 6 Polarization: -13.55 SS G_CDS: -2.87 Total: -16.42 kcal Atomic # 7 Polarization: -38.25 SS G_CDS: 0.89 Total: -37.36 kcal Atomic # 14 Polarization: 20.26 SS G_CDS: -4.21 Total: 16.05 kcal Atomic # 17 Polarization: -1.56 SS G_CDS: -1.50 Total: -3.06 kcal Total LS contribution 4.16 Total: 4.16 kcal Total: -27.43 -6.59 -34.03 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260929025.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 114.675 kcal (2) G-P(sol) polarization free energy of solvation -27.433 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 87.242 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.593 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.027 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.648 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds