Wall clock time and date at job start Mon Mar 30 2020 06:35:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.38290 * 119.92912 * 2 1 4 4 C 1.38101 * 120.06838 * 180.02562 * 3 2 1 5 5 C 1.38873 * 119.93253 * 359.97438 * 4 3 2 6 6 N 1.40077 * 120.07191 * 180.02562 * 5 4 3 7 7 N 1.39871 * 125.68893 * 324.97676 * 6 5 4 8 8 C 1.30306 * 109.31101 * 180.02562 * 7 6 5 9 9 C 1.41966 * 108.10768 * 359.97438 * 8 7 6 10 10 C 1.41464 * 126.56989 * 180.26450 * 9 8 7 11 11 H 1.08009 * 119.99582 * 179.68845 * 10 9 8 12 12 C 1.39685 * 120.00332 * 359.69026 * 10 9 8 13 13 N 1.31051 * 119.99665 * 359.97438 * 12 10 9 14 14 Si 1.86796 * 120.00204 * 180.02562 * 12 10 9 15 15 H 1.48501 * 109.47138 * 59.99709 * 14 12 10 16 16 H 1.48508 * 109.47163 * 179.97438 * 14 12 10 17 17 H 1.48498 * 109.47218 * 299.99819 * 14 12 10 18 18 C 1.34834 * 125.69076 * 145.00227 * 6 5 4 19 19 Cl 1.73601 * 126.44909 * 0.02562 * 18 6 5 20 20 C 1.38871 * 119.86146 * 0.28066 * 5 4 3 21 21 C 1.38112 * 119.92327 * 359.42175 * 20 5 4 22 22 H 1.08998 * 109.47122 * 90.00400 * 1 2 3 23 23 H 1.09003 * 109.46546 * 210.00581 * 1 2 3 24 24 H 1.09001 * 109.47078 * 329.99527 * 1 2 3 25 25 H 1.07995 * 119.96103 * 359.97438 * 3 2 1 26 26 H 1.07997 * 120.03566 * 179.97438 * 4 3 2 27 27 H 1.07998 * 125.94752 * 180.02562 * 8 7 6 28 28 H 0.97006 * 119.99547 * 180.02562 * 13 12 10 29 29 H 1.07993 * 120.03940 * 179.70178 * 20 5 4 30 30 H 1.08004 * 119.96206 * 180.29575 * 21 20 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1970 1.1985 0.0000 4 6 3.5780 1.2018 -0.0005 5 6 4.2739 0.0000 -0.0005 6 7 5.6747 0.0000 -0.0005 7 7 6.4907 0.9303 -0.6525 8 6 7.7408 0.6291 -0.4421 9 6 7.7837 -0.5328 0.3725 10 6 8.9448 -1.1919 0.8402 11 1 8.8535 -2.0705 1.4618 12 6 10.2091 -0.7064 0.4984 13 7 10.3197 0.3594 -0.2562 14 14 11.7422 -1.5771 1.1154 15 1 11.7495 -2.9771 0.6203 16 1 12.9484 -0.8694 0.6157 17 1 11.7475 -1.5773 2.6004 18 6 6.4613 -0.8970 0.6276 19 17 5.9289 -2.2510 1.5747 20 6 3.5782 -1.2018 -0.0059 21 6 2.1971 -1.1984 0.0009 22 1 -0.3633 -0.0001 -1.0276 23 1 -0.3632 -0.8900 0.5140 24 1 -0.3633 0.8900 0.5139 25 1 1.6553 2.1327 -0.0004 26 1 4.1163 2.1381 -0.0010 27 1 8.5957 1.1698 -0.8207 28 1 11.1978 0.6963 -0.4939 29 1 4.1164 -2.1380 -0.0108 30 1 1.6554 -2.1328 0.0015 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260969303.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:35:57 Heat of formation + Delta-G solvation = 83.815898 kcal Electronic energy + Delta-G solvation = -16505.475766 eV Core-core repulsion = 13713.791211 eV Total energy + Delta-G solvation = -2791.684555 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 262.057 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -40.02227 -38.50476 -35.49484 -34.17961 -32.93085 -30.69670 -29.93993 -29.16759 -26.21711 -24.71126 -22.47010 -21.57961 -19.75649 -19.51492 -17.84130 -16.18447 -15.17756 -15.12725 -14.98677 -14.21882 -13.82329 -13.47146 -13.21697 -13.17755 -12.93334 -12.22049 -12.03933 -11.71931 -11.45446 -11.28068 -11.23828 -11.01581 -10.87910 -10.65779 -10.41935 -9.84034 -9.60607 -9.18742 -8.86926 -8.63518 -7.70663 -7.27021 -6.76835 -4.27648 1.47812 1.71262 2.85764 2.91730 3.07656 3.11619 3.16733 3.89609 3.93544 4.04091 4.16813 5.08617 5.08903 5.26588 5.31227 5.43880 5.65572 5.72325 5.84604 5.94380 6.10404 6.24255 6.45537 6.63392 6.80127 6.86307 6.89486 7.08981 7.20188 7.27864 7.76786 8.24081 8.34848 8.60428 8.82773 9.03878 10.21356 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.041776 B = 0.005314 C = 0.004791 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 670.074732 B = 5267.740583 C = 5842.756430 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.123 4.123 3 C -0.100 4.100 4 C -0.131 4.131 5 C 0.192 3.808 6 N -0.341 5.341 7 N -0.305 5.305 8 C 0.056 3.944 9 C 0.024 3.976 10 C -0.420 4.420 11 H 0.081 0.919 12 C 0.070 3.930 13 N -0.827 5.827 14 Si 0.924 3.076 15 H -0.266 1.266 16 H -0.279 1.279 17 H -0.266 1.266 18 C -0.073 4.073 19 Cl -0.054 7.054 20 C -0.143 4.143 21 C -0.097 4.097 22 H 0.064 0.936 23 H 0.061 0.939 24 H 0.061 0.939 25 H 0.121 0.879 26 H 0.127 0.873 27 H 0.216 0.784 28 H 0.282 0.718 29 H 0.130 0.870 30 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.110 -0.889 0.628 10.169 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C -0.125 4.125 3 C -0.119 4.119 4 C -0.152 4.152 5 C 0.097 3.903 6 N -0.123 5.123 7 N -0.124 5.124 8 C -0.134 4.134 9 C 0.014 3.986 10 C -0.453 4.453 11 H 0.099 0.901 12 C -0.144 4.144 13 N -0.457 5.457 14 Si 0.749 3.251 15 H -0.190 1.190 16 H -0.204 1.204 17 H -0.190 1.190 18 C -0.215 4.215 19 Cl -0.027 7.027 20 C -0.164 4.164 21 C -0.116 4.116 22 H 0.082 0.918 23 H 0.080 0.920 24 H 0.080 0.920 25 H 0.139 0.861 26 H 0.145 0.855 27 H 0.232 0.768 28 H 0.093 0.907 29 H 0.148 0.852 30 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -10.721 -0.112 0.088 10.722 hybrid contribution 1.257 -1.090 0.757 1.828 sum -9.465 -1.203 0.845 9.578 Atomic orbital electron populations 1.20681 0.91564 1.02205 1.01744 1.19765 0.95733 0.93176 1.03780 1.20775 0.93218 0.97373 1.00536 1.20925 0.93929 0.97209 1.03102 1.17462 0.80196 0.94021 0.98654 1.44723 1.02037 1.22960 1.42624 1.76856 1.03504 1.12721 1.19273 1.25331 0.93259 0.97063 0.97712 1.17848 0.89395 0.94579 0.96745 1.18875 0.88625 1.10709 1.27048 0.90084 1.25803 1.00950 0.94316 0.93322 1.69394 1.26279 1.20123 1.29855 0.86089 0.79198 0.79913 0.79882 1.19043 1.20352 1.19036 1.21051 0.90148 0.96723 1.13596 1.98207 1.90551 1.42788 1.71122 1.21174 0.94310 0.97393 1.03562 1.20743 0.93072 0.97388 1.00395 0.91753 0.91992 0.91993 0.86126 0.85502 0.76838 0.90677 0.85217 0.86105 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.07 10.01 36.01 0.36 -0.71 16 2 C -0.12 -1.73 5.88 -104.58 -0.62 -2.34 16 3 C -0.10 -1.50 9.69 -39.61 -0.38 -1.88 16 4 C -0.13 -2.40 9.75 -39.40 -0.38 -2.78 16 5 C 0.19 4.00 6.35 -83.62 -0.53 3.47 16 6 N -0.34 -8.20 3.71 -7.03 -0.03 -8.23 16 7 N -0.31 -7.64 12.21 30.98 0.38 -7.26 16 8 C 0.06 1.44 10.91 -16.77 -0.18 1.26 16 9 C 0.02 0.64 5.94 -106.77 -0.63 0.01 16 10 C -0.42 -10.89 9.24 -37.81 -0.35 -11.24 16 11 H 0.08 2.05 7.79 -52.48 -0.41 1.64 16 12 C 0.07 1.69 5.49 -17.34 -0.10 1.60 16 13 N -0.83 -20.16 10.32 55.54 0.57 -19.59 16 14 Si 0.92 18.46 29.56 -169.99 -5.02 13.44 16 15 H -0.27 -5.29 7.11 56.52 0.40 -4.88 16 16 H -0.28 -5.40 7.11 56.52 0.40 -5.00 16 17 H -0.27 -5.29 7.11 56.52 0.40 -4.89 16 18 C -0.07 -1.82 7.36 -15.76 -0.12 -1.94 16 19 Cl -0.05 -1.15 26.30 -51.86 -1.36 -2.52 16 20 C -0.14 -2.64 8.79 -39.39 -0.35 -2.98 16 21 C -0.10 -1.47 9.69 -39.61 -0.38 -1.85 16 22 H 0.06 0.59 8.14 -51.93 -0.42 0.17 16 23 H 0.06 0.56 8.08 -51.93 -0.42 0.14 16 24 H 0.06 0.56 8.08 -51.93 -0.42 0.14 16 25 H 0.12 1.45 8.06 -52.49 -0.42 1.03 16 26 H 0.13 2.35 8.05 -52.49 -0.42 1.93 16 27 H 0.22 5.43 5.77 -52.49 -0.30 5.12 16 28 H 0.28 6.29 8.30 -40.82 -0.34 5.95 16 29 H 0.13 2.45 6.16 -52.49 -0.32 2.13 16 30 H 0.12 1.49 8.06 -52.48 -0.42 1.06 16 LS Contribution 279.02 15.07 4.20 4.20 Total: -1.00 -27.18 279.02 -7.62 -34.80 By element: Atomic # 1 Polarization: 7.24 SS G_CDS: -2.70 Total: 4.54 kcal Atomic # 6 Polarization: -15.73 SS G_CDS: -3.66 Total: -19.39 kcal Atomic # 7 Polarization: -36.00 SS G_CDS: 0.93 Total: -35.08 kcal Atomic # 14 Polarization: 18.46 SS G_CDS: -5.02 Total: 13.44 kcal Atomic # 17 Polarization: -1.15 SS G_CDS: -1.36 Total: -2.52 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -27.18 -7.62 -34.80 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260969303.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.618 kcal (2) G-P(sol) polarization free energy of solvation -27.183 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 91.435 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.619 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.802 kcal (6) G-S(sol) free energy of system = (1) + (5) 83.816 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds