Wall clock time and date at job start Mon Mar 30 2020 06:26:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.36028 * 116.99746 * 2 1 4 4 C 1.39114 * 119.86417 * 359.97438 * 3 2 1 5 5 C 1.38375 * 120.57002 * 180.02562 * 4 3 2 6 6 C 1.38297 * 120.28215 * 359.97438 * 5 4 3 7 7 O 1.35723 * 120.13509 * 179.97438 * 6 5 4 8 8 C 1.42895 * 117.00522 * 359.97438 * 7 6 5 9 9 F 1.39901 * 109.47184 * 60.00109 * 8 7 6 10 10 F 1.39902 * 109.47069 * 300.00266 * 8 7 6 11 11 C 1.41322 * 119.71864 * 0.25151 * 6 5 4 12 12 C 1.41091 * 120.27587 * 179.74762 * 11 6 5 13 13 H 1.07997 * 120.00305 * 36.14610 * 12 11 6 14 14 C 1.39909 * 119.99920 * 216.14400 * 12 11 6 15 15 N 1.30894 * 119.99998 * 20.26338 * 14 12 11 16 16 Si 1.86800 * 119.99994 * 200.26362 * 14 12 11 17 17 H 1.48499 * 109.47189 * 94.79705 * 16 14 12 18 18 H 1.48506 * 109.46973 * 214.79581 * 16 14 12 19 19 H 1.48502 * 109.47164 * 334.79582 * 16 14 12 20 20 C 1.38187 * 119.85989 * 179.97438 * 3 2 1 21 21 F 1.35100 * 120.14739 * 359.97438 * 20 3 2 22 22 H 1.09000 * 109.47047 * 299.99864 * 1 2 3 23 23 H 1.08994 * 109.47630 * 59.99837 * 1 2 3 24 24 H 1.09006 * 109.47679 * 180.02562 * 1 2 3 25 25 H 1.07999 * 119.71265 * 0.02562 * 4 3 2 26 26 H 1.07996 * 119.85798 * 179.97438 * 5 4 3 27 27 H 1.08999 * 109.47142 * 180.02562 * 8 7 6 28 28 H 0.97006 * 120.00203 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2120 0.0000 4 6 1.2860 2.3769 -0.0005 5 6 1.8989 3.6175 -0.0011 6 6 3.2785 3.7138 -0.0006 7 8 3.8766 4.9321 -0.0016 8 6 3.0196 6.0756 -0.0038 9 9 2.2112 6.0547 1.1378 10 9 2.2131 6.0517 -1.1468 11 6 4.0628 2.5382 -0.0049 12 6 5.4712 2.6227 -0.0097 13 1 5.9670 3.4082 0.5412 14 6 6.2256 1.6888 -0.7283 15 7 5.6687 1.0001 -1.6921 16 14 8.0273 1.4247 -0.3121 17 1 8.1560 0.2825 0.6281 18 1 8.7845 1.1302 -1.5552 19 1 8.5740 2.6514 0.3216 20 6 3.4266 1.2811 0.0005 21 9 4.1626 0.1481 0.0016 22 1 -0.3633 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3635 -1.0277 0.0005 25 1 0.2079 2.3124 -0.0005 26 1 1.2974 4.5144 -0.0019 27 1 3.6240 6.9826 -0.0049 28 1 6.1918 0.3529 -2.1906 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575659147.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:26:39 Heat of formation + Delta-G solvation = -202.388467 kcal Electronic energy + Delta-G solvation = -20210.980804 eV Core-core repulsion = 16392.026840 eV Total energy + Delta-G solvation = -3818.953964 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 262.060 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -48.76211 -46.89108 -46.76525 -38.93143 -37.87831 -35.28126 -33.48595 -29.91066 -28.72111 -26.62186 -25.42981 -24.89766 -21.47285 -20.91058 -18.18347 -17.92709 -17.38477 -17.30212 -16.44479 -15.67519 -15.18366 -15.00431 -14.79962 -13.99281 -13.83059 -13.64092 -13.53287 -13.17100 -13.10519 -12.82536 -12.75548 -12.43089 -11.80000 -11.44000 -11.27342 -11.19796 -11.06311 -11.00658 -10.50493 -10.35902 -9.81028 -9.66307 -9.07748 -7.44388 -6.88754 -6.75073 -4.47935 2.53785 2.59368 3.08576 3.13989 3.15019 3.46431 3.94027 4.04439 4.15489 4.48728 4.88484 5.10722 5.33221 5.57385 5.65737 5.73050 5.84584 5.91201 6.24269 6.50592 6.70434 7.05994 7.21873 7.28194 7.40698 7.63023 7.98503 8.20774 8.44073 8.64802 8.76969 10.13560 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.015031 B = 0.010533 C = 0.006625 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1862.419705 B = 2657.582924 C = 4225.359001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.321 6.321 3 C 0.094 3.906 4 C -0.270 4.270 5 C -0.134 4.134 6 C -0.010 4.010 7 O -0.303 6.303 8 C 0.406 3.594 9 F -0.211 7.211 10 F -0.209 7.209 11 C 0.109 3.891 12 C -0.447 4.447 13 H 0.092 0.908 14 C 0.076 3.924 15 N -0.767 5.767 16 Si 0.914 3.086 17 H -0.266 1.266 18 H -0.277 1.277 19 H -0.260 1.260 20 C 0.026 3.974 21 F -0.130 7.130 22 H 0.047 0.953 23 H 0.047 0.953 24 H 0.086 0.914 25 H 0.111 0.889 26 H 0.111 0.889 27 H 0.166 0.834 28 H 0.286 0.714 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.402 4.825 1.897 6.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.235 6.235 3 C 0.049 3.951 4 C -0.290 4.290 5 C -0.154 4.154 6 C -0.053 4.053 7 O -0.221 6.221 8 C 0.315 3.685 9 F -0.193 7.193 10 F -0.191 7.191 11 C 0.105 3.895 12 C -0.475 4.475 13 H 0.110 0.890 14 C -0.146 4.146 15 N -0.390 5.390 16 Si 0.738 3.262 17 H -0.191 1.191 18 H -0.202 1.202 19 H -0.184 1.184 20 C 0.004 3.996 21 F -0.109 7.109 22 H 0.065 0.935 23 H 0.066 0.934 24 H 0.105 0.895 25 H 0.129 0.871 26 H 0.129 0.871 27 H 0.182 0.818 28 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -4.078 4.445 1.693 6.266 hybrid contribution 0.142 -0.124 -0.034 0.192 sum -3.936 4.321 1.659 6.076 Atomic orbital electron populations 1.22824 0.80246 1.02279 1.00706 1.86070 1.19895 1.27653 1.89927 1.18795 0.90766 0.84049 1.01518 1.20009 0.97779 0.90933 1.20263 1.20696 0.92550 0.97589 1.04521 1.18535 0.90295 0.83137 1.13339 1.86486 1.33521 1.12471 1.89612 1.23215 0.80571 0.93106 0.71615 1.93040 1.76470 1.97072 1.52682 1.93047 1.76498 1.97060 1.52497 1.16549 0.93660 0.86275 0.93030 1.19268 0.89989 1.11841 1.26407 0.89005 1.25872 1.01586 0.93875 0.93244 1.69799 1.39157 1.17107 1.12935 0.86186 0.81109 0.79891 0.78986 1.19126 1.20227 1.18419 1.16537 0.84132 0.82671 1.16238 1.91336 1.77061 1.48141 1.94318 0.93464 0.93409 0.89531 0.87125 0.87075 0.81761 0.90317 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.56 9.81 101.05 0.99 1.55 15 2 O -0.32 -7.21 10.35 -19.83 -0.21 -7.41 15 3 C 0.09 2.31 6.68 -39.28 -0.26 2.05 15 4 C -0.27 -6.06 9.04 -39.21 -0.35 -6.41 15 5 C -0.13 -3.06 8.25 -39.51 -0.33 -3.39 15 6 C -0.01 -0.25 6.52 -38.39 -0.25 -0.50 15 7 O -0.30 -6.59 9.85 -18.87 -0.19 -6.77 15 8 C 0.41 6.63 5.98 101.05 0.60 7.23 15 9 F -0.21 -3.59 15.58 2.25 0.04 -3.55 15 10 F -0.21 -3.67 15.58 2.25 0.04 -3.64 15 11 C 0.11 2.96 5.41 -106.64 -0.58 2.38 15 12 C -0.45 -12.02 8.49 -37.88 -0.32 -12.34 15 13 H 0.09 2.37 7.87 -52.49 -0.41 1.95 15 14 C 0.08 1.95 4.50 -17.33 -0.08 1.88 15 15 N -0.77 -20.68 11.12 55.55 0.62 -20.07 15 16 Si 0.91 19.19 29.61 -169.99 -5.03 14.16 15 17 H -0.27 -5.60 7.11 56.52 0.40 -5.19 15 18 H -0.28 -5.63 7.11 56.52 0.40 -5.23 15 19 H -0.26 -5.29 7.11 56.52 0.40 -4.89 15 20 C 0.03 0.71 6.69 -38.60 -0.26 0.45 15 21 F -0.13 -3.70 14.09 2.25 0.03 -3.66 15 22 H 0.05 0.69 7.65 -51.93 -0.40 0.30 15 23 H 0.05 0.72 7.65 -51.93 -0.40 0.32 15 24 H 0.09 1.12 8.14 -51.93 -0.42 0.69 15 25 H 0.11 2.13 6.26 -52.49 -0.33 1.80 15 26 H 0.11 2.30 5.07 -52.49 -0.27 2.03 15 27 H 0.17 1.75 8.14 -51.93 -0.42 1.33 15 28 H 0.29 7.03 8.30 -40.82 -0.34 6.69 15 LS Contribution 257.92 15.07 3.89 3.89 Total: -1.00 -30.93 257.92 -3.43 -34.36 By element: Atomic # 1 Polarization: 1.58 SS G_CDS: -1.78 Total: -0.20 kcal Atomic # 6 Polarization: -6.27 SS G_CDS: -0.83 Total: -7.10 kcal Atomic # 7 Polarization: -20.68 SS G_CDS: 0.62 Total: -20.07 kcal Atomic # 8 Polarization: -13.80 SS G_CDS: -0.39 Total: -14.19 kcal Atomic # 9 Polarization: -10.96 SS G_CDS: 0.10 Total: -10.85 kcal Atomic # 14 Polarization: 19.19 SS G_CDS: -5.03 Total: 14.16 kcal Total LS contribution 3.89 Total: 3.89 kcal Total: -30.93 -3.43 -34.36 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575659147.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.025 kcal (2) G-P(sol) polarization free energy of solvation -30.932 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.957 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.431 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.363 kcal (6) G-S(sol) free energy of system = (1) + (5) -202.388 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds