Wall clock time and date at job start Mon Mar 30 2020 06:27:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35969 * 116.99754 * 2 1 4 4 C 1.37829 * 119.94523 * 359.97438 * 3 2 1 5 5 C 1.40785 * 119.80227 * 179.97438 * 4 3 2 6 6 C 1.41191 * 120.14630 * 179.97438 * 5 4 3 7 7 H 1.08000 * 119.99530 * 334.55579 * 6 5 4 8 8 C 1.39862 * 120.00047 * 154.55145 * 6 5 4 9 9 N 1.30893 * 119.99874 * 343.03975 * 8 6 5 10 10 Si 1.86793 * 120.00163 * 163.03874 * 8 6 5 11 11 H 1.48499 * 109.47434 * 0.02562 * 10 8 6 12 12 H 1.48497 * 109.47422 * 120.00222 * 10 8 6 13 13 H 1.48500 * 109.47318 * 240.00300 * 10 8 6 14 14 C 1.40863 * 119.70314 * 0.02562 * 5 4 3 15 15 C 1.37594 * 119.88738 * 0.02562 * 14 5 4 16 16 F 1.35099 * 119.90571 * 179.97438 * 15 14 5 17 17 C 1.39401 * 120.19436 * 359.73990 * 15 14 5 18 18 O 1.35787 * 119.85526 * 180.25455 * 17 15 14 19 19 C 1.42897 * 117.00022 * 270.26309 * 18 17 15 20 20 F 1.39906 * 109.47055 * 299.99413 * 19 18 17 21 21 F 1.39902 * 109.47318 * 59.99566 * 19 18 17 22 22 H 1.08997 * 109.47407 * 179.97438 * 1 2 3 23 23 H 1.09000 * 109.47473 * 59.99753 * 1 2 3 24 24 H 1.09002 * 109.47131 * 299.99933 * 1 2 3 25 25 H 1.07997 * 120.09817 * 359.96159 * 4 3 2 26 26 H 0.96999 * 120.00471 * 179.97438 * 9 8 6 27 27 H 1.07994 * 120.05301 * 179.97438 * 14 5 4 28 28 H 1.08999 * 109.46591 * 179.97438 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 1.2944 2.3667 -0.0005 5 6 1.9367 3.6195 0.0000 6 6 1.1736 4.8075 -0.0011 7 1 0.1716 4.8052 -0.4041 8 6 1.7153 5.9870 0.5198 9 7 2.7680 5.9368 1.2962 10 14 0.9366 7.6341 0.1077 11 1 -0.2333 7.4200 -0.7816 12 1 0.4915 8.2983 1.3590 13 1 1.9321 8.4937 -0.5818 14 6 3.3439 3.6825 0.0006 15 6 4.0822 2.5214 0.0000 16 9 5.4318 2.5814 0.0000 17 6 3.4416 1.2833 0.0044 18 8 4.1770 0.1418 0.0091 19 6 4.5338 -0.4052 -1.2619 20 9 3.3730 -0.7089 -1.9814 21 9 5.2935 0.5285 -1.9748 22 1 -0.3634 -1.0276 -0.0005 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3633 0.5138 0.8900 25 1 0.2159 2.3109 -0.0016 26 1 3.1439 6.7548 1.6572 27 1 3.8424 4.6405 0.0006 28 1 5.1188 -1.3132 -1.1153 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575659174.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:27:20 Heat of formation + Delta-G solvation = -219.916459 kcal Electronic energy + Delta-G solvation = -20175.467254 eV Core-core repulsion = 16355.753219 eV Total energy + Delta-G solvation = -3819.714034 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 262.060 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -48.33467 -47.73573 -46.45791 -39.14170 -37.06132 -36.16378 -33.41269 -29.63185 -28.62288 -26.86129 -26.00502 -24.20694 -21.33725 -20.99766 -18.26212 -17.96773 -17.42905 -17.07970 -16.26438 -15.80880 -15.31886 -15.09038 -14.77650 -14.61416 -14.27367 -13.67980 -13.32854 -13.30133 -12.86130 -12.67022 -12.52249 -12.03258 -11.89816 -11.60988 -11.35618 -11.31696 -11.19924 -10.75917 -10.63891 -10.05597 -9.97690 -9.79212 -9.24103 -7.60656 -7.20700 -7.06284 -4.75369 2.21098 2.68447 2.89677 2.93334 2.98243 3.69520 3.82915 3.98039 4.24263 4.47843 5.15985 5.33671 5.44891 5.54519 5.68559 5.69116 5.89707 6.31492 6.40739 6.56056 6.68764 6.86276 6.97709 7.41895 7.54162 7.77534 7.92651 8.08185 8.31175 8.50710 8.65751 9.82725 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.024830 B = 0.007274 C = 0.006076 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1127.390328 B = 3848.380933 C = 4607.498251 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.315 6.315 3 C 0.183 3.817 4 C -0.316 4.316 5 C 0.159 3.841 6 C -0.437 4.437 7 H 0.089 0.911 8 C 0.073 3.927 9 N -0.769 5.769 10 Si 0.917 3.083 11 H -0.257 1.257 12 H -0.271 1.271 13 H -0.268 1.268 14 C -0.219 4.219 15 C 0.147 3.853 16 F -0.149 7.149 17 C -0.139 4.139 18 O -0.303 6.303 19 C 0.383 3.617 20 F -0.209 7.209 21 F -0.213 7.213 22 H 0.087 0.913 23 H 0.050 0.950 24 H 0.051 0.949 25 H 0.114 0.886 26 H 0.289 0.711 27 H 0.136 0.864 28 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.349 -5.310 -2.341 5.958 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.228 6.228 3 C 0.137 3.863 4 C -0.337 4.337 5 C 0.156 3.844 6 C -0.464 4.464 7 H 0.107 0.893 8 C -0.149 4.149 9 N -0.392 5.392 10 Si 0.740 3.260 11 H -0.180 1.180 12 H -0.196 1.196 13 H -0.193 1.193 14 C -0.239 4.239 15 C 0.127 3.873 16 F -0.127 7.127 17 C -0.184 4.184 18 O -0.222 6.222 19 C 0.293 3.707 20 F -0.191 7.191 21 F -0.195 7.195 22 H 0.105 0.895 23 H 0.069 0.931 24 H 0.070 0.930 25 H 0.132 0.868 26 H 0.100 0.900 27 H 0.154 0.846 28 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -1.003 -5.435 -2.066 5.900 hybrid contribution -0.314 0.998 -0.396 1.118 sum -1.317 -4.437 -2.461 5.242 Atomic orbital electron populations 1.22880 0.79714 1.02328 1.01257 1.86018 1.20253 1.27742 1.88806 1.18605 0.90018 0.83962 0.93687 1.20932 0.98358 0.91413 1.22948 1.17189 0.90843 0.91815 0.84596 1.19714 1.01346 0.92403 1.32939 0.89289 1.26106 0.94346 1.02033 0.92418 1.69848 1.18135 1.31412 1.19791 0.86100 0.80282 0.80032 0.79540 1.18012 1.19571 1.19256 1.21177 0.94388 0.95897 1.12447 1.17479 0.75849 0.93163 1.00768 1.91370 1.30072 1.97308 1.93971 1.17024 0.86414 0.83372 1.31631 1.86751 1.70529 1.40139 1.24783 1.23727 0.78993 0.89520 0.78424 1.93028 1.53007 1.93306 1.79809 1.93032 1.76258 1.70003 1.80239 0.89458 0.93129 0.92996 0.86838 0.90015 0.84630 0.83117 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.53 9.81 101.05 0.99 1.52 15 2 O -0.31 -6.60 9.72 -34.30 -0.33 -6.93 15 3 C 0.18 4.32 6.44 -39.18 -0.25 4.07 15 4 C -0.32 -7.48 8.77 -38.77 -0.34 -7.82 15 5 C 0.16 4.06 5.57 -106.82 -0.59 3.47 15 6 C -0.44 -10.67 9.03 -37.85 -0.34 -11.01 15 7 H 0.09 2.04 7.90 -52.49 -0.41 1.63 15 8 C 0.07 1.68 5.14 -17.34 -0.09 1.59 15 9 N -0.77 -18.62 10.96 55.54 0.61 -18.01 15 10 Si 0.92 17.08 29.59 -169.99 -5.03 12.05 15 11 H -0.26 -4.71 7.11 56.52 0.40 -4.31 15 12 H -0.27 -4.96 7.11 56.52 0.40 -4.55 15 13 H -0.27 -4.95 7.11 56.52 0.40 -4.54 15 14 C -0.22 -5.70 8.64 -38.82 -0.34 -6.03 15 15 C 0.15 3.76 7.00 -39.38 -0.28 3.48 15 16 F -0.15 -3.67 16.71 2.25 0.04 -3.63 15 17 C -0.14 -3.42 5.37 -38.60 -0.21 -3.63 15 18 O -0.30 -6.78 9.97 -33.73 -0.34 -7.12 15 19 C 0.38 7.10 6.35 101.05 0.64 7.75 15 20 F -0.21 -4.13 16.45 2.25 0.04 -4.10 15 21 F -0.21 -4.32 16.58 2.25 0.04 -4.28 15 22 H 0.09 1.08 8.14 -51.93 -0.42 0.66 15 23 H 0.05 0.76 7.65 -51.93 -0.40 0.37 15 24 H 0.05 0.78 7.66 -51.93 -0.40 0.39 15 25 H 0.11 2.42 6.27 -52.49 -0.33 2.09 15 26 H 0.29 6.26 8.30 -40.82 -0.34 5.92 15 27 H 0.14 3.59 6.19 -52.49 -0.32 3.27 15 28 H 0.15 1.95 8.14 -51.93 -0.42 1.53 15 LS Contribution 263.67 15.07 3.97 3.97 Total: -1.00 -28.57 263.67 -3.65 -32.22 By element: Atomic # 1 Polarization: 4.29 SS G_CDS: -1.84 Total: 2.45 kcal Atomic # 6 Polarization: -5.81 SS G_CDS: -0.80 Total: -6.62 kcal Atomic # 7 Polarization: -18.62 SS G_CDS: 0.61 Total: -18.01 kcal Atomic # 8 Polarization: -13.38 SS G_CDS: -0.67 Total: -14.05 kcal Atomic # 9 Polarization: -12.12 SS G_CDS: 0.11 Total: -12.01 kcal Atomic # 14 Polarization: 17.08 SS G_CDS: -5.03 Total: 12.05 kcal Total LS contribution 3.97 Total: 3.97 kcal Total: -28.57 -3.65 -32.22 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575659174.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -187.694 kcal (2) G-P(sol) polarization free energy of solvation -28.571 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -216.265 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.652 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.222 kcal (6) G-S(sol) free energy of system = (1) + (5) -219.916 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds