Wall clock time and date at job start Mon Mar 30 2020 06:27:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35755 * 116.99757 * 2 1 4 4 C 1.41272 * 120.26838 * 89.99874 * 3 2 1 5 5 C 1.41114 * 120.23670 * 359.97438 * 4 3 2 6 6 H 1.08002 * 120.00358 * 25.68689 * 5 4 3 7 7 C 1.39895 * 119.99669 * 205.41138 * 5 4 3 8 8 N 1.30896 * 120.00128 * 16.67296 * 7 5 4 9 9 Si 1.86805 * 119.99683 * 196.67020 * 7 5 4 10 10 H 1.48492 * 109.47207 * 59.99872 * 9 7 5 11 11 H 1.48499 * 109.46916 * 180.02562 * 9 7 5 12 12 H 1.48499 * 109.47145 * 299.99941 * 9 7 5 13 13 C 1.40797 * 119.52205 * 179.71886 * 4 3 2 14 14 C 1.36451 * 120.03642 * 0.23244 * 13 4 3 15 15 C 1.39028 * 120.53899 * 359.97438 * 14 13 4 16 16 F 1.35097 * 119.75809 * 180.02562 * 15 14 13 17 17 C 1.38674 * 120.26375 * 270.17892 * 3 2 1 18 18 O 1.36069 * 120.02470 * 0.02562 * 17 3 2 19 19 C 1.42900 * 116.99555 * 270.27663 * 18 17 3 20 20 F 1.39904 * 109.47198 * 299.99302 * 19 18 17 21 21 F 1.39893 * 109.47477 * 60.00174 * 19 18 17 22 22 H 1.08998 * 109.46912 * 180.02562 * 1 2 3 23 23 H 1.09007 * 109.47013 * 300.00334 * 1 2 3 24 24 H 1.08999 * 109.47009 * 60.00285 * 1 2 3 25 25 H 0.96998 * 120.00024 * 180.02562 * 8 7 5 26 26 H 1.07994 * 119.98085 * 180.25499 * 13 4 3 27 27 H 1.07998 * 119.73255 * 180.02562 * 14 13 4 28 28 H 1.09005 * 109.47005 * 180.02562 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0453 1.2096 0.0000 4 6 2.3685 1.8441 1.2201 5 6 2.0526 1.2253 2.4484 6 1 1.9597 0.1507 2.5036 7 6 1.8655 2.0034 3.5958 8 7 1.6580 3.2912 3.4867 9 14 1.9118 1.2045 5.2838 10 1 3.2369 0.5681 5.4940 11 1 1.6872 2.2376 6.3266 12 1 0.8475 0.1728 5.3725 13 6 3.0130 3.0958 1.2018 14 6 3.3169 3.6902 0.0117 15 6 2.9959 3.0696 -1.1902 16 9 3.3046 3.6720 -2.3593 17 6 2.3592 1.8340 -1.1977 18 8 2.0493 1.2350 -2.3795 19 6 3.0335 0.3663 -2.9441 20 9 4.2085 1.0866 -3.1846 21 9 3.3007 -0.6778 -2.0522 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 1.5286 3.8308 4.2823 26 1 3.2672 3.5856 2.1301 27 1 3.8117 4.6501 0.0034 28 1 2.6606 -0.0437 -3.8828 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575660232.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:27:24 Heat of formation + Delta-G solvation = -215.769061 kcal Electronic energy + Delta-G solvation = -20419.102090 eV Core-core repulsion = 16599.567900 eV Total energy + Delta-G solvation = -3819.534190 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 262.060 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.48010 -47.59994 -46.59227 -38.97801 -36.88851 -35.87743 -33.61940 -29.55471 -28.88499 -26.34252 -25.08812 -24.92830 -21.37100 -21.10020 -18.54146 -17.63798 -17.19628 -16.96380 -16.80222 -15.94263 -15.17894 -14.83705 -14.69395 -14.20647 -14.06718 -13.62781 -13.42025 -13.29205 -12.96664 -12.65421 -12.42854 -12.23204 -11.81987 -11.77073 -11.33970 -11.14370 -10.98947 -10.76510 -10.45077 -10.28487 -9.79874 -9.37642 -8.80196 -7.66059 -7.52676 -7.04070 -4.58999 2.08239 2.36018 2.95298 2.96749 3.01631 3.69712 3.75566 4.13777 4.32099 4.77277 5.00993 5.28490 5.35666 5.64836 6.00935 6.12476 6.18228 6.37102 6.49370 6.55476 6.70846 6.90752 7.13639 7.38017 7.57458 7.64467 7.99483 8.14536 8.42420 8.54654 8.86229 9.89177 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.026028 B = 0.007788 C = 0.006672 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1075.519794 B = 3594.511183 C = 4195.630762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.314 6.314 3 C -0.010 4.010 4 C 0.095 3.905 5 C -0.432 4.432 6 H 0.091 0.909 7 C 0.072 3.928 8 N -0.785 5.785 9 Si 0.918 3.082 10 H -0.260 1.260 11 H -0.276 1.276 12 H -0.262 1.262 13 C -0.123 4.123 14 C -0.126 4.126 15 C -0.030 4.030 16 F -0.158 7.158 17 C 0.051 3.949 18 O -0.330 6.330 19 C 0.404 3.596 20 F -0.209 7.209 21 F -0.198 7.198 22 H 0.073 0.927 23 H 0.044 0.956 24 H 0.031 0.969 25 H 0.287 0.713 26 H 0.135 0.865 27 H 0.112 0.888 28 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.299 -3.057 -4.203 5.206 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.230 6.230 3 C -0.055 4.055 4 C 0.091 3.909 5 C -0.460 4.460 6 H 0.109 0.891 7 C -0.147 4.147 8 N -0.409 5.409 9 Si 0.741 3.259 10 H -0.184 1.184 11 H -0.201 1.201 12 H -0.187 1.187 13 C -0.143 4.143 14 C -0.145 4.145 15 C -0.050 4.050 16 F -0.137 7.137 17 C 0.007 3.993 18 O -0.249 6.249 19 C 0.314 3.686 20 F -0.191 7.191 21 F -0.180 7.180 22 H 0.092 0.908 23 H 0.063 0.937 24 H 0.050 0.950 25 H 0.098 0.902 26 H 0.153 0.847 27 H 0.130 0.870 28 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -0.397 -2.987 -4.174 5.148 hybrid contribution 0.061 0.056 0.619 0.624 sum -0.336 -2.930 -3.556 4.620 Atomic orbital electron populations 1.22798 0.82057 1.00897 0.99973 1.85965 1.17993 1.25008 1.94069 1.18517 1.06336 0.90431 0.90265 1.17808 0.90084 0.91279 0.91685 1.19542 1.39297 0.95707 0.91424 0.89130 1.26055 0.91942 0.94664 1.02081 1.69800 1.31688 1.06640 1.32726 0.86190 0.80387 0.79754 0.79543 1.18443 1.20127 1.18680 1.20997 0.99549 0.97131 0.96588 1.20441 1.02823 0.99989 0.91269 1.17330 1.11601 0.94762 0.81326 1.91316 1.92304 1.83230 1.46873 1.18644 1.05193 0.91904 0.83524 1.86550 1.40740 1.60587 1.37040 1.23328 0.76974 0.77672 0.90578 1.93061 1.52106 1.79262 1.94629 1.93099 1.94118 1.58629 1.72117 0.90806 0.93707 0.94998 0.90157 0.84718 0.87026 0.82320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.74 11.13 101.05 1.12 1.86 15 2 O -0.31 -7.37 8.93 -33.62 -0.30 -7.67 15 3 C -0.01 -0.24 5.51 -38.27 -0.21 -0.45 15 4 C 0.10 2.44 5.57 -106.69 -0.59 1.84 15 5 C -0.43 -10.79 8.71 -37.87 -0.33 -11.12 15 6 H 0.09 2.25 7.66 -52.49 -0.40 1.85 15 7 C 0.07 1.67 5.15 -17.33 -0.09 1.58 15 8 N -0.78 -18.56 10.96 55.55 0.61 -17.95 15 9 Si 0.92 17.44 29.59 -169.99 -5.03 12.41 15 10 H -0.26 -4.95 7.11 56.52 0.40 -4.55 15 11 H -0.28 -5.09 7.11 56.52 0.40 -4.69 15 12 H -0.26 -4.96 7.11 56.52 0.40 -4.56 15 13 C -0.12 -3.02 8.63 -39.26 -0.34 -3.36 15 14 C -0.13 -2.92 9.94 -39.93 -0.40 -3.32 15 15 C -0.03 -0.71 7.04 -39.01 -0.27 -0.99 15 16 F -0.16 -3.67 16.74 2.25 0.04 -3.63 15 17 C 0.05 1.23 5.34 -39.14 -0.21 1.02 15 18 O -0.33 -7.08 9.99 -34.61 -0.35 -7.43 15 19 C 0.40 7.19 6.35 101.05 0.64 7.83 15 20 F -0.21 -4.04 16.63 2.25 0.04 -4.00 15 21 F -0.20 -3.92 16.42 2.25 0.04 -3.88 15 22 H 0.07 1.19 8.14 -51.93 -0.42 0.77 15 23 H 0.04 0.90 8.14 -51.93 -0.42 0.48 15 24 H 0.03 0.60 8.14 -51.93 -0.42 0.18 15 25 H 0.29 6.16 8.30 -40.82 -0.34 5.82 15 26 H 0.14 3.28 6.19 -52.49 -0.32 2.96 15 27 H 0.11 2.28 8.06 -52.49 -0.42 1.86 15 28 H 0.16 1.88 8.14 -51.93 -0.42 1.46 15 LS Contribution 266.73 15.07 4.02 4.02 Total: -1.00 -28.08 266.73 -3.59 -31.66 By element: Atomic # 1 Polarization: 3.55 SS G_CDS: -1.97 Total: 1.57 kcal Atomic # 6 Polarization: -4.43 SS G_CDS: -0.68 Total: -5.11 kcal Atomic # 7 Polarization: -18.56 SS G_CDS: 0.61 Total: -17.95 kcal Atomic # 8 Polarization: -14.45 SS G_CDS: -0.65 Total: -15.09 kcal Atomic # 9 Polarization: -11.62 SS G_CDS: 0.11 Total: -11.51 kcal Atomic # 14 Polarization: 17.44 SS G_CDS: -5.03 Total: 12.41 kcal Total LS contribution 4.02 Total: 4.02 kcal Total: -28.08 -3.59 -31.66 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575660232.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -184.105 kcal (2) G-P(sol) polarization free energy of solvation -28.077 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -212.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.664 kcal (6) G-S(sol) free energy of system = (1) + (5) -215.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds