Wall clock time and date at job start Mon Mar 30 2020 06:27:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35995 * 117.00066 * 2 1 4 4 C 1.37708 * 119.92001 * 359.97438 * 3 2 1 5 5 C 1.40796 * 119.79164 * 179.97438 * 4 3 2 6 6 C 1.41111 * 120.17718 * 179.97438 * 5 4 3 7 7 H 1.07998 * 119.99815 * 204.67471 * 6 5 4 8 8 C 1.39851 * 120.00189 * 24.66990 * 6 5 4 9 9 N 1.30918 * 119.99793 * 17.84472 * 8 6 5 10 10 Si 1.86800 * 120.00312 * 197.84643 * 8 6 5 11 11 H 1.48504 * 109.47086 * 359.97438 * 10 8 6 12 12 H 1.48494 * 109.47408 * 119.99998 * 10 8 6 13 13 H 1.48505 * 109.46889 * 240.00458 * 10 8 6 14 14 C 1.41134 * 119.64668 * 359.97438 * 5 4 3 15 15 F 1.35099 * 120.08144 * 179.97438 * 14 5 4 16 16 C 1.37742 * 119.83953 * 0.04487 * 14 5 4 17 17 C 1.39036 * 120.20436 * 359.95653 * 16 14 5 18 18 O 1.35746 * 119.81888 * 180.02562 * 17 16 14 19 19 C 1.42900 * 116.99799 * 359.97062 * 18 17 16 20 20 F 1.39900 * 109.47040 * 300.00201 * 19 18 17 21 21 F 1.39898 * 109.46856 * 60.00431 * 19 18 17 22 22 H 1.09007 * 109.46537 * 60.00312 * 1 2 3 23 23 H 1.09000 * 109.47192 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.47298 * 300.00440 * 1 2 3 25 25 H 1.07999 * 120.10533 * 359.70618 * 4 3 2 26 26 H 0.97005 * 119.99673 * 179.97438 * 9 8 6 27 27 H 1.07997 * 119.89525 * 179.97438 * 16 14 5 28 28 H 1.09002 * 109.46848 * 180.02562 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2948 2.3656 -0.0005 5 6 1.9368 3.6187 0.0000 6 6 1.1746 4.8062 -0.0011 7 1 1.5987 5.7196 -0.3912 8 6 -0.1299 4.8003 0.5029 9 7 -0.5269 3.8245 1.2802 10 14 -1.3059 6.1847 0.0671 11 1 -0.6182 7.1578 -0.8192 12 1 -2.4896 5.6262 -0.6344 13 1 -1.7445 6.8710 1.3088 14 6 3.3468 3.6807 0.0017 15 9 3.9720 4.8783 0.0017 16 6 4.0840 2.5171 0.0018 17 6 3.4433 1.2832 0.0012 18 8 4.1775 0.1414 0.0018 19 6 5.5993 0.2844 0.0025 20 9 5.9978 0.9870 -1.1398 21 9 5.9967 0.9875 1.1448 22 1 -0.3633 0.5138 -0.8901 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5139 0.8899 25 1 0.2163 2.3096 -0.0057 26 1 -1.4317 3.8206 1.6301 27 1 5.1630 2.5635 0.0026 28 1 6.0637 -0.7018 0.0025 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575660661.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:27:29 Heat of formation + Delta-G solvation = -212.492001 kcal Electronic energy + Delta-G solvation = -20053.640879 eV Core-core repulsion = 16234.248793 eV Total energy + Delta-G solvation = -3819.392086 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 262.060 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -48.81575 -47.31340 -46.81775 -39.18840 -37.41229 -35.85384 -33.49043 -29.66942 -28.66731 -26.81827 -25.99441 -24.37960 -21.54131 -20.90986 -18.38187 -18.16890 -17.36564 -17.25551 -16.28591 -15.75196 -15.49550 -14.97664 -14.84626 -14.09795 -14.08589 -13.73241 -13.51095 -13.22447 -13.14357 -12.92073 -12.69617 -12.54621 -11.89989 -11.71608 -11.47518 -11.11993 -10.96964 -10.94371 -10.61364 -10.33480 -9.83038 -9.73948 -9.19267 -7.63406 -7.10754 -6.80947 -4.54330 2.46274 2.57127 2.97777 3.00499 3.05322 3.36758 3.79077 4.00746 4.14752 4.31368 4.80604 5.11575 5.29830 5.71764 5.73659 5.86384 5.94543 6.09863 6.32493 6.58403 6.70872 6.93527 6.95585 7.35312 7.60654 7.73577 7.84184 8.15117 8.41334 8.55580 8.69600 9.94245 Molecular weight = 262.06amu Principal moments of inertia in cm(-1) A = 0.024509 B = 0.007446 C = 0.006021 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1142.143008 B = 3759.278877 C = 4649.377071 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.322 6.322 3 C 0.131 3.869 4 C -0.214 4.214 5 C 0.100 3.900 6 C -0.444 4.444 7 H 0.088 0.912 8 C 0.076 3.924 9 N -0.786 5.786 10 Si 0.915 3.085 11 H -0.257 1.257 12 H -0.269 1.269 13 H -0.272 1.272 14 C -0.022 4.022 15 F -0.157 7.157 16 C -0.151 4.151 17 C -0.037 4.037 18 O -0.313 6.313 19 C 0.408 3.592 20 F -0.208 7.208 21 F -0.207 7.207 22 H 0.047 0.953 23 H 0.084 0.916 24 H 0.058 0.942 25 H 0.146 0.854 26 H 0.284 0.716 27 H 0.122 0.878 28 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.393 -5.884 -1.624 6.556 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.237 6.237 3 C 0.086 3.914 4 C -0.234 4.234 5 C 0.097 3.903 6 C -0.472 4.472 7 H 0.106 0.894 8 C -0.143 4.143 9 N -0.410 5.410 10 Si 0.738 3.262 11 H -0.181 1.181 12 H -0.194 1.194 13 H -0.197 1.197 14 C -0.042 4.042 15 F -0.136 7.136 16 C -0.170 4.170 17 C -0.080 4.080 18 O -0.232 6.232 19 C 0.317 3.683 20 F -0.190 7.190 21 F -0.189 7.189 22 H 0.066 0.934 23 H 0.102 0.898 24 H 0.076 0.924 25 H 0.163 0.837 26 H 0.095 0.905 27 H 0.140 0.860 28 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 2.237 -6.245 -1.476 6.795 hybrid contribution -0.401 1.197 -0.029 1.263 sum 1.836 -5.047 -1.506 5.578 Atomic orbital electron populations 1.22861 0.79644 1.01933 1.01687 1.85980 1.20301 1.27575 1.89796 1.18055 0.87964 0.84695 1.00664 1.21079 1.00122 0.89368 1.12828 1.17397 0.88840 0.94010 0.90067 1.19531 0.97000 0.96332 1.34365 0.89437 1.25965 0.98769 0.97331 0.92272 1.69850 1.18956 1.30905 1.21323 0.86138 0.79600 0.80893 0.79524 1.18075 1.19442 1.19691 1.17400 0.90569 0.79173 1.17060 1.91286 1.82649 1.44441 1.95235 1.20603 0.98982 0.90820 1.06636 1.17160 0.87289 0.83414 1.20142 1.86460 1.14998 1.31272 1.90456 1.23131 0.82160 0.91211 0.71786 1.93054 1.90851 1.82600 1.52495 1.93060 1.90875 1.82542 1.52453 0.93441 0.89773 0.92386 0.83662 0.90484 0.86004 0.81722 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.60 9.81 101.05 0.99 1.59 15 2 O -0.32 -7.01 10.27 -34.35 -0.35 -7.36 15 3 C 0.13 3.16 6.70 -39.16 -0.26 2.90 15 4 C -0.21 -5.38 7.65 -38.81 -0.30 -5.68 15 5 C 0.10 2.68 5.58 -106.74 -0.60 2.09 15 6 C -0.44 -11.61 8.76 -37.89 -0.33 -11.94 15 7 H 0.09 2.26 7.73 -52.49 -0.41 1.86 15 8 C 0.08 1.81 5.13 -17.34 -0.09 1.73 15 9 N -0.79 -19.04 10.97 55.54 0.61 -18.43 15 10 Si 0.91 17.86 29.60 -169.99 -5.03 12.83 15 11 H -0.26 -5.05 7.11 56.52 0.40 -4.65 15 12 H -0.27 -5.09 7.11 56.52 0.40 -4.69 15 13 H -0.27 -5.23 7.11 56.52 0.40 -4.83 15 14 C -0.02 -0.56 7.30 -38.66 -0.28 -0.85 15 15 F -0.16 -4.04 16.70 2.25 0.04 -4.00 15 16 C -0.15 -3.64 8.19 -39.47 -0.32 -3.96 15 17 C -0.04 -0.89 6.52 -38.67 -0.25 -1.14 15 18 O -0.31 -6.42 10.20 -33.57 -0.34 -6.76 15 19 C 0.41 6.50 5.98 101.05 0.60 7.10 15 20 F -0.21 -3.60 15.56 2.25 0.04 -3.56 15 21 F -0.21 -3.64 15.56 2.25 0.04 -3.61 15 22 H 0.05 0.80 7.65 -51.93 -0.40 0.40 15 23 H 0.08 1.14 8.14 -51.93 -0.42 0.72 15 24 H 0.06 1.04 7.66 -51.93 -0.40 0.64 15 25 H 0.15 3.57 4.38 -52.49 -0.23 3.34 15 26 H 0.28 6.15 8.30 -40.82 -0.34 5.81 15 27 H 0.12 2.74 5.05 -52.49 -0.27 2.48 15 28 H 0.17 1.63 8.14 -51.93 -0.42 1.21 15 LS Contribution 258.85 15.07 3.90 3.90 Total: -1.00 -29.23 258.85 -3.62 -32.85 By element: Atomic # 1 Polarization: 3.97 SS G_CDS: -1.67 Total: 2.30 kcal Atomic # 6 Polarization: -7.32 SS G_CDS: -0.84 Total: -8.16 kcal Atomic # 7 Polarization: -19.04 SS G_CDS: 0.61 Total: -18.43 kcal Atomic # 8 Polarization: -13.43 SS G_CDS: -0.70 Total: -14.12 kcal Atomic # 9 Polarization: -11.28 SS G_CDS: 0.11 Total: -11.17 kcal Atomic # 14 Polarization: 17.86 SS G_CDS: -5.03 Total: 12.83 kcal Total LS contribution 3.90 Total: 3.90 kcal Total: -29.23 -3.62 -32.85 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575660661.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -179.640 kcal (2) G-P(sol) polarization free energy of solvation -29.230 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -208.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.622 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.852 kcal (6) G-S(sol) free energy of system = (1) + (5) -212.492 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds