Wall clock time and date at job start Mon Mar 30 2020 06:20:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 O 1.20761 * 119.99909 * 2 1 4 4 C 1.50702 * 120.00152 * 180.02562 * 2 1 3 5 5 H 1.09000 * 109.47285 * 154.99818 * 4 2 1 6 6 Cl 1.80299 * 109.47338 * 34.99357 * 4 2 1 7 7 C 1.50707 * 109.46613 * 274.99624 * 4 2 1 8 8 C 1.38726 * 119.35281 * 65.00211 * 7 4 2 9 9 C 1.36422 * 121.33118 * 179.97438 * 8 7 4 10 10 C 1.40850 * 119.95725 * 0.02562 * 9 8 7 11 11 C 1.40781 * 120.61165 * 180.02562 * 10 9 8 12 12 H 1.08003 * 120.00170 * 205.22218 * 11 10 9 13 13 C 1.40262 * 120.00182 * 25.22581 * 11 10 9 14 14 N 1.30653 * 120.00014 * 26.31066 * 13 11 10 15 15 Si 1.86799 * 120.00122 * 206.30923 * 13 11 10 16 16 H 1.48503 * 109.47116 * 180.02562 * 15 13 11 17 17 H 1.48500 * 109.47168 * 299.99918 * 15 13 11 18 18 H 1.48496 * 109.47251 * 59.99954 * 15 13 11 19 19 C 1.46499 * 118.76757 * 0.27538 * 10 9 8 20 20 C 1.43201 * 120.63313 * 179.72365 * 19 10 9 21 21 N 6.83664 * 132.59734 * 119.85083 * 2 1 3 22 22 C 1.38018 * 119.35425 * 245.02023 * 7 4 2 23 23 H 1.09000 * 109.46675 * 239.99627 * 1 2 3 24 24 H 1.08994 * 109.47065 * 359.97438 * 1 2 3 25 25 H 1.09001 * 109.46936 * 120.00167 * 1 2 3 26 26 H 1.07995 * 119.33039 * 0.02562 * 8 7 4 27 27 H 1.07991 * 120.01901 * 180.02562 * 9 8 7 28 28 H 0.97001 * 119.99243 * 5.88792 * 14 13 11 29 29 H 1.08007 * 120.04201 * 359.97438 * 22 7 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1108 1.0458 0.0000 4 6 2.2606 -1.3051 -0.0006 5 1 3.2488 -1.1539 -0.4348 6 17 1.3552 -2.5215 -0.9760 7 6 2.4045 -1.8025 1.4147 8 6 1.2703 -2.1631 2.1275 9 6 1.3539 -2.6189 3.4106 10 6 2.6105 -2.7303 4.0370 11 6 2.7128 -3.1995 5.3603 12 1 3.5586 -2.9170 5.9696 13 6 1.7163 -4.0341 5.8875 14 7 1.0024 -4.7834 5.0901 15 14 1.4099 -4.0742 7.7298 16 1 0.3132 -5.0299 8.0284 17 1 2.6469 -4.5073 8.4280 18 1 1.0265 -2.7180 8.1975 19 6 3.8085 -2.3436 3.2877 20 6 5.1056 -2.4351 3.8876 21 7 6.1344 -2.5050 4.3649 22 6 3.6622 -1.8901 1.9765 23 1 -0.3633 -0.5139 0.8900 24 1 -0.3633 1.0276 0.0005 25 1 -0.3633 -0.5139 -0.8900 26 1 0.3017 -2.0821 1.6567 27 1 0.4571 -2.8942 3.9456 28 1 1.2170 -4.8276 4.1451 29 1 4.5316 -1.6041 1.4031 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396146677.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:20:01 Heat of formation + Delta-G solvation = -22.460176 kcal Electronic energy + Delta-G solvation = -16624.585509 eV Core-core repulsion = 13730.573815 eV Total energy + Delta-G solvation = -2894.011693 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 263.045 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -39.50926 -38.09044 -35.86589 -35.29709 -34.62340 -31.70354 -30.26094 -29.78958 -27.67783 -24.77310 -22.69202 -21.23218 -19.62859 -18.53603 -17.09276 -15.80281 -15.68053 -15.36708 -14.83855 -14.64886 -14.15088 -13.49458 -13.05691 -12.95997 -12.69672 -12.61772 -12.14940 -12.14172 -11.95607 -11.77591 -11.43786 -11.23584 -11.10487 -10.74451 -10.63369 -10.41579 -10.12336 -9.92052 -9.56203 -9.35219 -8.16815 -8.00281 -7.69000 -5.02447 1.68234 1.95136 2.31694 2.65525 2.94201 3.02843 3.14754 3.66356 3.72463 3.83326 4.19477 4.26432 4.92212 5.03821 5.14938 5.28754 5.31092 5.54841 5.61746 5.72672 5.88926 6.10978 6.47179 6.50891 6.83336 7.05874 7.17937 7.25060 7.36174 7.48550 7.55925 7.70312 8.13015 8.23030 8.63110 9.46491 Molecular weight = 263.05amu Principal moments of inertia in cm(-1) A = 0.021385 B = 0.006253 C = 0.005542 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1308.990463 B = 4476.897830 C = 5050.938483 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C 0.370 3.630 3 O -0.454 6.454 4 C 0.025 3.975 5 H 0.114 0.886 6 Cl -0.181 7.181 7 C -0.259 4.259 8 C -0.034 4.034 9 C -0.213 4.213 10 C 0.130 3.870 11 C -0.460 4.460 12 H 0.088 0.912 13 C 0.036 3.964 14 N -0.750 5.750 15 Si 1.066 2.934 16 H -0.267 1.267 17 H -0.270 1.270 18 H -0.267 1.267 19 C -0.188 4.188 20 C 0.297 3.703 21 N -0.501 5.501 22 C 0.017 3.983 23 H 0.100 0.900 24 H 0.080 0.920 25 H 0.097 0.903 26 H 0.103 0.897 27 H 0.116 0.884 28 H 0.308 0.692 29 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.814 2.696 -5.814 8.653 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.264 4.264 2 C 0.246 3.754 3 O -0.327 6.327 4 C -0.019 4.019 5 H 0.132 0.868 6 Cl -0.154 7.154 7 C -0.261 4.261 8 C -0.054 4.054 9 C -0.232 4.232 10 C 0.124 3.876 11 C -0.486 4.486 12 H 0.106 0.894 13 C -0.191 4.191 14 N -0.370 5.370 15 Si 0.887 3.113 16 H -0.191 1.191 17 H -0.195 1.195 18 H -0.192 1.192 19 C -0.194 4.194 20 C -0.013 4.013 21 N -0.180 5.180 22 C -0.004 4.004 23 H 0.118 0.882 24 H 0.099 0.901 25 H 0.115 0.885 26 H 0.121 0.879 27 H 0.134 0.866 28 H 0.123 0.877 29 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -4.981 2.353 -4.050 6.837 hybrid contribution 0.537 0.463 -1.543 1.699 sum -4.444 2.816 -5.593 7.678 Atomic orbital electron populations 1.22392 0.93906 1.04746 1.05385 1.24638 0.92452 0.89103 0.69255 1.90418 1.72205 1.33951 1.36161 1.23260 0.97391 0.87617 0.93598 0.86763 1.98709 1.79162 1.62520 1.75012 1.18073 0.94197 1.20595 0.93262 1.20231 0.96224 0.94929 0.93969 1.20810 0.96687 1.09826 0.95890 1.18512 0.89517 0.88225 0.91354 1.20999 1.07731 1.22931 0.96928 0.89390 1.27428 0.91092 0.91539 1.09056 1.70414 1.32404 1.24303 1.09880 0.83595 0.78225 0.78500 0.70957 1.19139 1.19507 1.19231 1.16667 0.85566 1.22685 0.94507 1.25669 0.92253 0.91351 0.91994 1.81056 1.12679 1.14262 1.09976 1.20361 0.95220 0.92309 0.92519 0.88168 0.90083 0.88462 0.87923 0.86571 0.87734 0.87792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -2.43 9.38 36.01 0.34 -2.09 15 2 C 0.37 5.54 6.18 -29.03 -0.18 5.36 15 3 O -0.45 -8.06 17.83 6.00 0.11 -7.95 15 4 C 0.03 0.38 3.35 -29.03 -0.10 0.29 15 5 H 0.11 1.65 7.84 -51.93 -0.41 1.24 15 6 Cl -0.18 -2.55 26.64 -51.86 -1.38 -3.93 15 7 C -0.26 -4.63 4.85 -104.52 -0.51 -5.14 15 8 C -0.03 -0.63 8.50 -40.06 -0.34 -0.97 15 9 C -0.21 -4.41 7.94 -39.25 -0.31 -4.72 15 10 C 0.13 2.93 5.46 -104.62 -0.57 2.36 15 11 C -0.46 -10.64 8.50 -37.86 -0.32 -10.96 15 12 H 0.09 2.09 7.46 -52.48 -0.39 1.70 15 13 C 0.04 0.79 4.93 -17.29 -0.09 0.70 15 14 N -0.75 -16.78 12.32 55.56 0.68 -16.09 15 15 Si 1.07 18.67 30.01 -169.99 -5.10 13.57 15 16 H -0.27 -4.61 7.11 56.52 0.40 -4.21 15 17 H -0.27 -4.65 7.11 56.52 0.40 -4.25 15 18 H -0.27 -4.52 7.11 56.52 0.40 -4.12 15 19 C -0.19 -4.11 5.94 -104.17 -0.62 -4.73 15 20 C 0.30 6.78 14.32 -22.46 -0.32 6.46 15 21 N -0.50 -11.81 18.54 41.85 0.78 -11.04 15 22 C 0.02 0.33 9.37 -39.19 -0.37 -0.03 15 23 H 0.10 1.15 6.07 -51.93 -0.32 0.83 15 24 H 0.08 0.87 8.12 -51.93 -0.42 0.45 15 25 H 0.10 0.98 7.35 -51.93 -0.38 0.60 15 26 H 0.10 1.62 6.03 -52.49 -0.32 1.30 15 27 H 0.12 2.43 6.54 -52.49 -0.34 2.09 15 28 H 0.31 7.00 6.76 -40.82 -0.28 6.73 15 29 H 0.10 1.80 7.92 -52.48 -0.42 1.38 15 LS Contribution 279.47 15.07 4.21 4.21 Total: -1.00 -24.82 279.47 -6.15 -30.97 By element: Atomic # 1 Polarization: 5.81 SS G_CDS: -2.06 Total: 3.74 kcal Atomic # 6 Polarization: -10.10 SS G_CDS: -3.38 Total: -13.48 kcal Atomic # 7 Polarization: -28.59 SS G_CDS: 1.46 Total: -27.13 kcal Atomic # 8 Polarization: -8.06 SS G_CDS: 0.11 Total: -7.95 kcal Atomic # 14 Polarization: 18.67 SS G_CDS: -5.10 Total: 13.57 kcal Atomic # 17 Polarization: -2.55 SS G_CDS: -1.38 Total: -3.93 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -24.82 -6.15 -30.97 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396146677.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.511 kcal (2) G-P(sol) polarization free energy of solvation -24.819 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.308 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.152 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.971 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.460 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds